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jrherr/batch_rename_FASTA

Last active December 31, 2015 11:49
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batch rename of FASTA files - I had to recently use this one-liner to rename a large number of sequence reads which were sent to me. I'm just posting this here so I can remember it.
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batch_rename_FASTA
awk ‘/^>/{$0=”>”++i}1′ test.fna > test1.fna
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