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April 15, 2017 03:52
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regression anatomy
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reganatomy <- function(model, variable) { | |
variable <- if (is.character(variable) & 1 == length(variable)) { | |
variable | |
} else { | |
deparse(substitute(variable)) | |
} | |
mod.mat <- model.matrix(model) | |
var.names <- colnames(mod.mat) | |
var <- which(variable == var.names) | |
if (0 == length(var)) { | |
stop(paste(variable, "is not a column of the model matrix.")) | |
} | |
response <- model.response(model.frame(model)) | |
if (is.null(weights(model))) { | |
wt <- rep(1, length(response)) | |
} else { | |
wt <- weights(model) | |
} | |
res0 <- as_tibble(lm(cbind(mod.mat[, var], response) ~ 1, weights = wt)$residual) | |
names(res0) <- c("y", "x") | |
res <- as_tibble(lsfit(mod.mat[, -var], cbind(mod.mat[, var], response), | |
wt = wt, intercept = FALSE)$residuals) | |
names(res) <- c("y_partial", "x_partial") | |
bind_cols(res0, res) | |
} | |
data("Bfox", package = "car") | |
m1 <- lm(partic ~ tfr + menwage + womwage + debt + parttime, data = Bfox) | |
an <- reganatomy(m1, "womwage") | |
ggplot(an, aes(x = x, y = y)) + geom_point() | |
ggplot(an, aes(x = x_partial, y = y_partial)) + geom_point() | |
betawt <- function(model, variables = NULL) { | |
X <- model.matrix(model) | |
var_names <- colnames(X) | |
variables <- variables %||% setdiff(colnames(X), "(Intercept)") | |
badvars <- setdiff(variables, var_names) | |
if (length(badvars)) { | |
stop("Variables not found in model matrix: ", paste0(badvars, collapse = ", ")) | |
} | |
wt <- model$weights | |
offset <- model$offset | |
f <- function(i) { | |
ii <- which(i == var_names) | |
mod2 <- if (!is.null(wt)) { | |
lm.wfit(X[ , -ii], X[, ii], wt, offset = offset) | |
} else { | |
lm.fit(X[ , -ii], X[, ii], offset = offset) | |
} | |
weighted.residuals(mod2) ^ 2 | |
} | |
as_tibble(set_names(map(variables, f), variables)) | |
} | |
data("Bfox", package = "car") | |
m1 <- lm(partic ~ tfr + menwage + womwage + debt + parttime, data = Bfox) | |
an <- betawt(m1, c("womwage", "tfr", "debt", "parttime")) |
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