Last active
January 2, 2019 23:23
-
-
Save juliohm/79383a8cdfb5865ba30f3a1eb85a6ff8 to your computer and use it in GitHub Desktop.
Profiling Kriging
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| 9 /buildworker/worker/package_linux64/build/src/gf.c:2184; jl_apply_generic | |
| 1 /buildworker/worker/package_linux64/build/src/jltypes.c:635; typekey_compare | |
| 30140 /buildworker/worker/package_linux64/build/src/task.c:268; start_task | |
| 30140 /buildworker/worker/package_linux64/build/src/julia.h:1536; jl_apply | |
| 30140 /buildworker/worker/package_linux64/build/src/gf.c:2182; jl_apply_generic | |
| 30140 /buildworker/worker/package_linux64/build/src/gf.c:1829; jl_fptr_trampoline | |
| 30140 ./task.jl:259; (::getfield(IJulia, Symbol("##12#15")))() | |
| 30140 /home/juliohm/.julia/packages/IJulia/DL02A/src/eventloop.jl:8; eventloop(::ZMQ.Socket) | |
| 30140 ./essentials.jl:685; invokelatest | |
| 30140 ./essentials.jl:686; #invokelatest#1 | |
| 30140 /buildworker/worker/package_linux64/build/src/builtins.c:594; jl_f__apply_latest | |
| 30140 /buildworker/worker/package_linux64/build/src/builtins.c:556; jl_f__apply | |
| 30140 /buildworker/worker/package_linux64/build/src/julia.h:1536; jl_apply | |
| 30140 /buildworker/worker/package_linux64/build/src/gf.c:2182; jl_apply_generic | |
| 30140 /buildworker/worker/package_linux64/build/src/gf.c:1829; jl_fptr_trampoline | |
| 30140 /home/juliohm/.julia/packages/IJulia/DL02A/src/execute_request.jl:65; execute_request(::ZMQ.Socket, ::IJulia.Msg) | |
| 30140 /buildworker/worker/package_linux64/build/src/gf.c:2182; jl_apply_generic | |
| 30140 /buildworker/worker/package_linux64/build/src/gf.c:1829; jl_fptr_trampoline | |
| 30140 /home/juliohm/.julia/packages/SoftGlobalScope/8FGzf/src/SoftGlobalScope.jl:207; softscope_include_string(::Module, ::String, ::String) | |
| 30140 ./boot.jl:319; eval | |
| 30140 /buildworker/worker/package_linux64/build/src/builtins.c:622; jl_toplevel_eval_in | |
| 30140 /buildworker/worker/package_linux64/build/src/toplevel.c:781; jl_toplevel_eval_flex | |
| 30140 /buildworker/worker/package_linux64/build/src/gf.c:1829; jl_fptr_trampoline | |
| 30140 ./In[2]:5; top-level scope | |
| 30140 /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.0/Profile/src/Profile.jl:25; macro expansion | |
| 30140 /buildworker/worker/package_linux64/build/src/gf.c:2182; jl_apply_generic | |
| 30132 /home/juliohm/.julia/dev/GeoStats/src/solvers/kriging.jl:123; solve(::EstimationProblem{PointSetData{Float64,2},RegularGrid{Float64,2},SimpleMapper}, ::Kriging) | |
| 29391 /home/juliohm/.julia/dev/GeoStats/src/solvers/kriging.jl:187; solve_locally(::EstimationProblem{PointSetData{Float64,2},RegularGrid{Float64,2},SimpleMapper}, ::Symbol, ::Dict{Symbol,Tuple}) | |
| 29390 /buildworker/worker/package_linux64/build/src/gf.c:2182; jl_apply_generic | |
| 29251 /home/juliohm/.julia/dev/KrigingEstimators/src/estimators.jl:24; fit!(::OrdinaryKriging{Float64,Float64}, ::SubArray{Float64,2,Array{Float64,2},Tuple{Base.Slice{Base.OneTo{Int64}},UnitRange{Int64}},true}, ::SubArray{Float64,1,Array{Float64,1},Tuple{Array{Int64,1}},false}) | |
| 4354 /home/juliohm/.julia/dev/KrigingEstimators/src/estimators.jl:78; set_lhs!(::OrdinaryKriging{Float64,Float64}, ::SubArray{Float64,2,Array{Float64,2},Tuple{Base.Slice{Base.OneTo{Int64}},UnitRange{Int64}},true}) | |
| 4317 /buildworker/worker/package_linux64/build/src/gf.c:2182; jl_apply_generic | |
| 4317 unknown stackframe | |
| 690 /home/juliohm/.julia/dev/Variography/src/pairwise.jl:30; pairwise!(::Array{Float64,2}, ::GaussianVariogram{Float64,Distances.Euclidean}, ::SubArray{Float64,2,Array{Float64,2},Tuple{Base.Slice{Base.OneTo{Int64}},UnitRange{Int64}},true}) | |
| 690 ./subarray.jl:135; view | |
| 690 ./subarray.jl:149; unsafe_view | |
| 690 ./subarray.jl:150; _maybe_reindex | |
| 690 ./subarray.jl:156; _maybe_reindex | |
| 690 ./subarray.jl:156; _maybe_reindex | |
| 673 ./subarray.jl:160; _maybe_reindex | |
| 672 ./subarray.jl:22; Type | |
| 632 ./subarray.jl:16; Type | |
| 343 /buildworker/worker/package_linux64/build/src/gc.c:954; jl_gc_pool_alloc | |
| 343 /buildworker/worker/package_linux64/build/src/gc.c:2633; jl_gc_collect | |
| 92 /buildworker/worker/package_linux64/build/src/gc.c:2562; _jl_gc_collect | |
| 91 /buildworker/worker/package_linux64/build/src/gc.c:1221; gc_sweep_other | |
| 69 /buildworker/worker/package_linux64/build/src/gc.c:887; sweep_malloced_arrays | |
| 225 /buildworker/worker/package_linux64/build/src/gc.c:2565; _jl_gc_collect | |
| 219 /buildworker/worker/package_linux64/build/src/gc.c:1279; gc_sweep_pool | |
| 219 /buildworker/worker/package_linux64/build/src/gc.c:1208; sweep_pool_pagetable | |
| 219 /buildworker/worker/package_linux64/build/src/gc.c:1179; sweep_pool_pagetable1 | |
| 215 /buildworker/worker/package_linux64/build/src/gc.c:1159; sweep_pool_pagetable0 | |
| 210 /buildworker/worker/package_linux64/build/src/gc.c:1139; sweep_pool_page | |
| 101 /buildworker/worker/package_linux64/build/src/gc.c:1071; sweep_page | |
| 3480 /home/juliohm/.julia/dev/Variography/src/pairwise.jl:31; pairwise!(::Array{Float64,2}, ::GaussianVariogram{Float64,Distances.Euclidean}, ::SubArray{Float64,2,Array{Float64,2},Tuple{Base.Slice{Base.OneTo{Int64}},UnitRange{Int64}},true}) | |
| 3430 /home/juliohm/.julia/dev/Variography/src/theoretical_variograms.jl:64; (::GaussianVariogram{Float64,Distances.Euclidean})(::SubArray{Float64,1,Array{Float64,2},Tuple{Base.Slice{Base.OneTo{Int64}},Int64},true}, ::SubArray{Float64,1,Array{Float64,2},Tuple{Base.Slice{Base.OneTo{In... | |
| 2406 /home/juliohm/.julia/dev/Variography/src/theoretical_variograms.jl:63; GaussianVariogram | |
| 2406 ./broadcast.jl:724; materialize | |
| 2406 ./broadcast.jl:734; copy | |
| 2406 ./broadcast.jl:507; getindex | |
| 2327 ./broadcast.jl:546; _broadcast_getindex | |
| 2327 ./broadcast.jl:570; _getindex | |
| 2268 ./broadcast.jl:546; _broadcast_getindex | |
| 2268 ./broadcast.jl:570; _getindex | |
| 2227 ./broadcast.jl:571; _getindex | |
| 2137 ./broadcast.jl:546; _broadcast_getindex | |
| 2137 ./broadcast.jl:570; _getindex | |
| 2137 ./broadcast.jl:571; _getindex | |
| 383 ./broadcast.jl:546; _broadcast_getindex | |
| 383 ./broadcast.jl:571; _getindex | |
| 302 ./broadcast.jl:546; _broadcast_getindex | |
| 302 ./broadcast.jl:570; _getindex | |
| 302 ./broadcast.jl:571; _getindex | |
| 234 ./broadcast.jl:546; _broadcast_getindex | |
| 234 ./broadcast.jl:570; _getindex | |
| 234 ./broadcast.jl:570; _getindex | |
| 234 ./broadcast.jl:547; _broadcast_getindex | |
| 234 ./broadcast.jl:574; _broadcast_getindex_evalf | |
| 234 ./float.jl:401; / | |
| 81 ./float.jl:399; _broadcast_getindex | |
| 1754 ./broadcast.jl:547; _broadcast_getindex | |
| 1754 ./broadcast.jl:574; _broadcast_getindex_evalf | |
| 364 ./special/exp.jl:116; exp(::Float64) | |
| 223 ./special/exp.jl:52; exp_kernel | |
| 223 ./float.jl:404; muladd | |
| 459 ./special/exp.jl:117; exp(::Float64) | |
| 195 ./float.jl:397; - | |
| 203 ./float.jl:401; / | |
| 842 /home/juliohm/.julia/packages/Distances/8u7Bg/src/metrics.jl:160; evaluate | |
| 395 ./simdloop.jl:65; macro expansion | |
| 378 /home/juliohm/.julia/packages/Distances/8u7Bg/src/metrics.jl:212; eval_end | |
| 78 ./math.jl:479; sqrt | |
| 56 ./float.jl:452; < | |
| 300 ./math.jl:480; sqrt | |
| 329 ./simdloop.jl:73; macro expansion | |
| 297 /home/juliohm/.julia/packages/Distances/8u7Bg/src/metrics.jl:163; macro expansion | |
| 144 /home/juliohm/.julia/packages/Distances/8u7Bg/src/metrics.jl:210; eval_op | |
| 144 ./float.jl:397; - | |
| 153 /home/juliohm/.julia/packages/Distances/8u7Bg/src/metrics.jl:211; eval_reduce | |
| 153 ./float.jl:395; + | |
| 19203 /home/juliohm/.julia/dev/KrigingEstimators/src/estimators.jl:81; set_lhs!(::OrdinaryKriging{Float64,Float64}, ::SubArray{Float64,2,Array{Float64,2},Tuple{Base.Slice{Base.OneTo{Int64}},UnitRange{Int64}},true}) | |
| 7111 ./array.jl:732; getindex | |
| 344 /buildworker/worker/package_linux64/build/src/array.c:532; jl_arrayref | |
| 521 /buildworker/worker/package_linux64/build/src/builtins.c:1049; jl_f_arrayref | |
| 1397 /buildworker/worker/package_linux64/build/src/builtins.c:1052; jl_f_arrayref | |
| 167 /buildworker/worker/package_linux64/build/src/builtins.c:1025; array_nd_index | |
| 293 /buildworker/worker/package_linux64/build/src/builtins.c:1030; array_nd_index | |
| 171 /buildworker/worker/package_linux64/build/src/builtins.c:1033; array_nd_index | |
| 154 /buildworker/worker/package_linux64/build/src/builtins.c:1034; array_nd_index | |
| 715 /buildworker/worker/package_linux64/build/src/datatype.c:680; jl_box_int64 | |
| 1082 /buildworker/worker/package_linux64/build/src/datatype.c:551; jl_new_bits | |
| 881 /buildworker/worker/package_linux64/build/src/gc.c:2668; jl_gc_alloc | |
| 652 /buildworker/worker/package_linux64/build/src/julia_internal.h:274; jl_gc_alloc_ | |
| 219 /buildworker/worker/package_linux64/build/src/gc.c:954; jl_gc_pool_alloc | |
| 219 /buildworker/worker/package_linux64/build/src/gc.c:2633; jl_gc_collect | |
| 116 /buildworker/worker/package_linux64/build/src/gc.c:2468; _jl_gc_collect | |
| 48 /buildworker/worker/package_linux64/build/src/gc.c:1815; gc_mark_loop | |
| 41 /buildworker/worker/package_linux64/build/src/gc.c:1551; gc_mark_scan_obj8 | |
| 30 /buildworker/worker/package_linux64/build/src/gc.c:1425; gc_try_setmark | |
| 73 /buildworker/worker/package_linux64/build/src/gc.c:2565; _jl_gc_collect | |
| 72 /buildworker/worker/package_linux64/build/src/gc.c:1279; gc_sweep_pool | |
| 72 /buildworker/worker/package_linux64/build/src/gc.c:1208; sweep_pool_pagetable | |
| 72 /buildworker/worker/package_linux64/build/src/gc.c:1179; sweep_pool_pagetable1 | |
| 72 /buildworker/worker/package_linux64/build/src/gc.c:1159; sweep_pool_pagetable0 | |
| 72 /buildworker/worker/package_linux64/build/src/gc.c:1139; sweep_pool_page | |
| 610 /buildworker/worker/package_linux64/build/src/gf.c:2178; jl_apply_generic | |
| 5028 /buildworker/worker/package_linux64/build/src/gf.c:2179; jl_apply_generic | |
| 331 /buildworker/worker/package_linux64/build/src/gf.c:2114; jl_lookup_generic_ | |
| 674 /buildworker/worker/package_linux64/build/src/gf.c:2121; jl_lookup_generic_ | |
| 2623 /buildworker/worker/package_linux64/build/src/gf.c:2122; jl_lookup_generic_ | |
| 908 /buildworker/worker/package_linux64/build/src/gf.c:2123; jl_lookup_generic_ | |
| 147 /buildworker/worker/package_linux64/build/src/gf.c:2050; sig_match_fast | |
| 742 /buildworker/worker/package_linux64/build/src/gf.c:2053; sig_match_fast | |
| 3233 /buildworker/worker/package_linux64/build/src/gf.c:2182; jl_apply_generic | |
| 1713 /home/juliohm/Desktop/julia-1.0.0/lib/julia/sys.so:?; jfptr_-_19042.clone_1 | |
| 470 /buildworker/worker/package_linux64/build/src/gc.c:954; jl_gc_pool_alloc | |
| 470 /buildworker/worker/package_linux64/build/src/gc.c:2633; jl_gc_collect | |
| 125 /buildworker/worker/package_linux64/build/src/gc.c:2562; _jl_gc_collect | |
| 124 /buildworker/worker/package_linux64/build/src/gc.c:1221; gc_sweep_other | |
| 94 /buildworker/worker/package_linux64/build/src/gc.c:887; sweep_malloced_arrays | |
| 314 /buildworker/worker/package_linux64/build/src/gc.c:2565; _jl_gc_collect | |
| 305 /buildworker/worker/package_linux64/build/src/gc.c:1279; gc_sweep_pool | |
| 305 /buildworker/worker/package_linux64/build/src/gc.c:1208; sweep_pool_pagetable | |
| 303 /buildworker/worker/package_linux64/build/src/gc.c:1179; sweep_pool_pagetable1 | |
| 299 /buildworker/worker/package_linux64/build/src/gc.c:1159; sweep_pool_pagetable0 | |
| 295 /buildworker/worker/package_linux64/build/src/gc.c:1139; sweep_pool_page | |
| 124 /buildworker/worker/package_linux64/build/src/gc.c:1071; sweep_page | |
| 390 /buildworker/worker/package_linux64/build/src/gc.c:958; jl_gc_pool_alloc | |
| 1353 unknown stackframe | |
| 312 ./array.jl:771; setindex!(::Array{Float64,2}, ::Float64, ::Int64, ::Int64) | |
| 4700 /home/juliohm/.julia/dev/KrigingEstimators/src/estimators.jl:89; set_lhs!(::OrdinaryKriging{Float64,Float64}, ::SubArray{Float64,2,Array{Float64,2},Tuple{Base.Slice{Base.OneTo{Int64}},UnitRange{Int64}},true}) | |
| 4697 /buildworker/worker/package_linux64/build/src/gf.c:2182; jl_apply_generic | |
| 4697 /home/juliohm/.julia/dev/KrigingEstimators/src/estimators/ordinary_kriging.jl:54; factorize(::OrdinaryKriging{Float64,Float64}, ::Array{Float64,2}) | |
| 4694 ./none:0; #lu | |
| 4694 ./none:0; #lu | |
| 4694 /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.0/LinearAlgebra/src/lu.jl:142; #lu#101 | |
| 4549 ./none:0; #lu! | |
| 4549 unknown stackframe | |
| 4547 /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.0/LinearAlgebra/src/lapack.jl:550; #lu!#97(::Bool, ::Function, ::Array{Float64,2}, ::Val{true}) | |
| 4547 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; dgetrf_64_ | |
| 4541 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; dgetrf_parallel | |
| 2771 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; dgetrf_parallel | |
| 1729 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; dgetrf_parallel | |
| 267 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; blas_level1_thread | |
| 263 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; exec_blas | |
| 237 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; exec_blas_async_wait | |
| 226 /usr/lib/libc.so.6:?; __sched_yield | |
| 371 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; exec_blas_async_wait | |
| 357 /usr/lib/libc.so.6:?; __sched_yield | |
| 420 /usr/lib/libpthread.so.0:?; __pthread_mutex_lock | |
| 381 /usr/lib/libpthread.so.0:?; __pthread_mutex_unlock_usercnt | |
| 231 /usr/lib/libpthread.so.0:?; __pthread_mutex_lock | |
| 225 /usr/lib/libpthread.so.0:?; __pthread_mutex_unlock_usercnt | |
| 375 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; exec_blas_async_wait | |
| 363 /usr/lib/libc.so.6:?; __sched_yield | |
| 362 /usr/lib/libpthread.so.0:?; __pthread_mutex_lock | |
| 394 /usr/lib/libpthread.so.0:?; __pthread_mutex_unlock_usercnt | |
| 1 /buildworker/worker/package_linux64/build/usr/share/julia/stdlib/v1.0/LinearAlgebra/src/factorization.jl:87; \(::LinearAlgebra.LU{Float64,Array{Float64,2}}, ::Array{Float64,1}) | |
| 1 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; add_y | |
| 3 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; blas_cpu_number | |
| 1 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; daxpy_k_HASWELL | |
| 1 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; daxpy_kernel_8 | |
| 3 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; ddot_kernel_8 | |
| 1 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; dgemm_incopy_HASWELL | |
| 1 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; dgemm_itcopy_HASWELL | |
| 266 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; dgemm_kernel_HASWELL | |
| 2 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; dgemv_kernel_4x4 | |
| 2 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; dger_k_HASWELL | |
| 1 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; dmin_k_HASWELL | |
| 1 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; dot_compute | |
| 5 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; dot_thread_function | |
| 2 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; dscal_k_HASWELL | |
| 2 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; dscal_kernel_inc_8 | |
| 15 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; dswap_k_HASWELL | |
| 1 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; dtrsv_NUN | |
| 1 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; exec_blas_async | |
| 86 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; idamax_k_HASWELL | |
| 1 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; inner_basic_thread.isra.0.constprop.1 | |
| 2 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; inner_thread | |
| 2 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; openblas_get_num_threads64_ | |
| 2 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; sgetf2_k | |
| 1 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; sgetrf_parallel | |
| 2 /home/juliohm/Desktop/julia-1.0.0/bin/../lib/julia/libopenblas64_.so:?; slaswp_minus | |
| 1 /home/juliohm/Desktop/julia-1.0.0/lib/julia/sys.so:?; jfptr_-_19042.clone_1 | |
| 5 /home/juliohm/Desktop/julia-1.0.0/lib/julia/sys.so:?; jl_system_image_data | |
| 3 /lib64/ld-linux-x86-64.so.2:?; _dl_tlsdesc_resolve_hold | |
| 2 /usr/lib/libc.so.6:?; __sched_getscheduler | |
| 1 /usr/lib/libc.so.6:?; systrim.isra.1.constprop.10 | |
| 36 /usr/lib/libpthread.so.0:?; __pthread_mutex_lock_full | |
| 30 /usr/lib/libpthread.so.0:?; __pthread_mutex_unlock_full | |
| 29 /usr/lib/libpthread.so.0:?; __pthread_mutex_unlock_usercnt | |
| 804 unknown stackframe | |
| 717 /buildworker/worker/package_linux64/build/src/gf.c:2184; jl_apply_generic |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment