Junpeng Lao junpenglao

## [WIP] Laplace approximation in pymc3.ipynb

      
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                junpenglao
                / [WIP] Laplace approximation in pymc3.ipynb
            
            
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              April 1, 2018 19:19
            
              
                Laplace approximation in PyMC3
              
          
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## Indexing a RV_sparse model.ipynb

      
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                junpenglao
                / Indexing a RV_sparse model.ipynb
            
            
              Created
              March 29, 2018 13:05
            
              
                https://discourse.pymc.io/t/indexing-using-a-free-random-variable/939/
              
          
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## smooth breakpoint.ipynb

      
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                / smooth breakpoint.ipynb
            
            
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              June 17, 2022 18:57
            
              
                https://stackoverflow.com/questions/49144144/convert-numpy-function-to-theano
              
          
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## brms_monotonic_compare.ipynb

      
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                / brms_monotonic_compare.ipynb
            
            
              Created
              March 1, 2018 11:28
            
              
                Ordered Statistics in PyMC3
              
          
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## magic_box_theano.py
import numpy
import theano
import theano.tensor as tt
from theano.gradient import disconnected_grad as stop_grad

x = tt.dscalar('x')
y = x ** 2
gy = tt.grad(y, x)

f = theano.function([x], gy)

## Nonlinear_funcs.ipynb

      
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                junpenglao
                / Nonlinear_funcs.ipynb
            
            
              Created
              February 7, 2018 23:05
            
          
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## Check Effective Sample Size.ipynb

      
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                / Check Effective Sample Size.ipynb
            
            
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              February 12, 2018 15:52
            
          
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## HMC_in_pyro.ipynb

      
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                / HMC_in_pyro.ipynb
            
            
              Last active
              January 23, 2018 17:18
            
              
                Testing the HMC in Pyro (recently merged to dev branch)
              
          
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## 10.1101_227165.ipynb

      
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                junpenglao
                / 10.1101_227165.ipynb
            
            
              Created
              December 2, 2017 20:16
            
              
                Bayesian reanalysis of https://www.biorxiv.org/content/early/2017/11/30/227165
              
          
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## Marginal Likelihood in Python.ipynb

      
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                junpenglao
                / Marginal Likelihood in Python.ipynb
            
            
              Last active
              February 9, 2024 13:19
            
              
                Marginal Likelihood in Python and PyMC3, based on the paper reading of "A Tutorial on Bridge Sampling"
              
          
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	import numpy
	import theano
	import theano.tensor as tt
	from theano.gradient import disconnected_grad as stop_grad

	x = tt.dscalar('x')
	y = x ** 2
	gy = tt.grad(y, x)

	f = theano.function([x], gy)