kaicode

function getMonday() {
	var date = new Date();

	// Set date to Monday just gone
	var day = date.getDay()
	date.setDate(date.getDate() - (day == 0 ? -6:1));

	// Zero time
	date.setHours(0);
	date.setMinutes(0);

kaicode

SnomedCT_Release_INT_20140131/
SnomedCT_Release_INT_20140131/Documentation/
SnomedCT_Release_INT_20140131/Documentation/doc_Icd10MapTechnicalGuideExemplars_Current-en-US_INT_20140131.xlsx
SnomedCT_Release_INT_20140131/Documentation/doc_SnomedCTReleaseNotes_Current-en-US_INT_20140131.pdf
SnomedCT_Release_INT_20140131/Readme_en_20140131.txt
SnomedCT_Release_INT_20140131/Resources/
SnomedCT_Release_INT_20140131/Resources/OrderedTypeReferenceSetExemplar/
SnomedCT_Release_INT_20140131/Resources/OrderedTypeReferenceSetExemplar/zres2_icRefset_OrderedTypeFull_INT_20110731.txt
SnomedCT_Release_INT_20140131/Resources/OrderedTypeReferenceSetExemplar/zres2_icRefset_OrderedTypeSnapshot_INT_20110731.txt
SnomedCT_Release_INT_20140131/Resources/StatedRelationshipsToOwlKRSS/

kaicode

Count EffectiveDate
326016 20020131
15338 20020731
14770 20030131
11061 20030731
6766 20040131
10706 20040731
8488 20050131
5014 20050731
8389 20060131

kaicode

kaikewley:~$ curl -I browser.ihtsdotools.org
HTTP/1.1 200 OK
Server: nginx/1.1.19
Date: Wed, 18 Mar 2015 10:01:19 GMT
Content-Type: text/html; charset=utf-8
Content-Length: 70878
Last-Modified: Thu, 12 Mar 2015 08:17:31 GMT
Connection: keep-alive
X-Clacks-Overhead: GNU Terry Pratchett
Accept-Ranges: bytes

kaicode

select distinct SUBSTRING_INDEX(term, '(', -1) from description_s as d left join concept_s as c on d.conceptid = c.id where d.typeid = 900000000000003001 and d.active = 1 and c.active = 1 limit 1000;
+--------------------------------+
| SUBSTRING_INDEX(term, '(', -1) |
+--------------------------------+
| finding)                       |
| body structure)                |
| disorder)                      |
| procedure)                     |
| morphologic abnormality)       |
| regime/therapy)                |

kaicode

set @branch='MAIN/WRPTEST/WRPTEST-336'
delete from component_change where concept_change_id in (select id from concept_change where activity_id in (select id from activity where branch = (select id from branch where branch_path=@branch)));
delete from concept_change where activity_id in (select id from activity where branch = (select id from branch where branch_path=@branch));
delete from activity where branch = (select id from branch where branch_path=@branch);
delete from branch where branch_path=@branch;

kaicode

import java.io.IOException;
import java.util.List;

import javax.servlet.FilterChain;
import javax.servlet.ServletException;
import javax.servlet.http.HttpServletRequest;
import javax.servlet.http.HttpServletResponse;

import org.springframework.security.authentication.AbstractAuthenticationToken;

kaicode

map $http_cookie $ihtsdo_cookie { default ""; "~(;\s|^)dev-ims-ihtsdo=(?<token>[^\;]+)" "dev-ims-ihtsdo=$token"; }

server {
  server_name _;
  listen 80;
  rewrite ^ https://$host$request_uri permanent;
  #endofhttpServer
}

server {

kaicode

library(httr)
library(jsonlite)

# ECL examples here https://confluence.ihtsdotools.org/display/DOCECL/6.+Examples
# Can test them in the browser here: 
ecl <- "<  404684003 |Clinical finding|:
             363698007 |Finding site| = << 39057004 |Pulmonary valve structure|, 
             116676008 |Associated morphology| = << 415582006 |Stenosis|"

kaicode

$ java -Xms6g -jar snomed-owl-toolkit*executable.jar -rf2-to-owl -rf2-snapshot-archives SnomedCT_InternationalRF2_PRODUCTION_20200131T120000Z.zip -version 20200131

Creating Ontology using the following options:
  Snapshot archives: [SnomedCT_InternationalRF2_PRODUCTION_20200131T120000Z.zip]
  Delta archive: -none-
  Ontology URI: http://snomed.info/sct/900000000000207008
  Ontology Version: 20200131
  Include Description Annotations: true

2020-02-28 13:44:00,759 [INFO  ] [main] org.snomed.otf.owltoolkit.conversion.RF2ToOWLService - Loading RF2 files