List of rOpenSci packages

packages.md

List of packages we need on rOpenSci's new Rstudio Server

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Please add to list as needed

• rgbif
• ggplot2
• plyr
• dplyr
• reshape2
• data.table
• rfigshare

Github only

• EML

CRAN:

• taxize
• rbison
• rinat
• ecoengine
• rebird

Github

• spocc
• rCharts

rfisheries

here's the deps for ropensci package listed above

c('XML','RCurl','stringr','plyr','httr','RJSONIO','foreach','ape','Taxonstand','reshape2','data.table','reshape','vegan','phytools','testthat','roxygen2','rjson','knitr','mapproj','ggplot2','grid','gridExtra','maptools','sp','maps','assertthat','whisker','lubridate','leafletR','rinat','rbison','rgbif','ecoengine','rebird','ggmap','rgeos','RColorBrewer','rgdal','shiny')

the cran packages

c('stats','methods','plyr','digest','grid','gtable','reshape','scales','proto','MASS','quantreg','Hmisc','mapproj','maps','hexbin','maptools','multcomp','nlme','testthat','abind','tcltk','foreach','doMC','itertools','iterators','assertthat','utils','Rcpp','hflights','RSQLite','extfuns','RMySQL','RPostgreSQL','data','table','bigrquery','Lahman','knitr','microbenchmark','ggplot','mgcv','stringr','lattice','chron','fastmatch','xts','bit')

Here's the list for ropensci and cran packages together

c('abind','ape','assertthat','bigrquery','bit','chron','data','data.table','digest','doMC','ecoengine','extfuns','fastmatch','foreach','ggmap','ggplot','ggplot2','grid','gridExtra','gtable','hexbin','hflights','Hmisc','httr','iterators','itertools','knitr','Lahman','lattice','leafletR','lubridate','mapproj','maps','maptools','MASS','methods','mgcv','microbenchmark','multcomp','nlme','phytools','plyr','proto','quantreg','rbison','RColorBrewer','Rcpp','RCurl','rebird','reshape','reshape2','rgbif','rgdal','rgeos','rinat','rjson','RJSONIO','RMySQL','roxygen2','RPostgreSQL','RSQLite','scales','shiny','sp','stats','stringr','table','Taxonstand','tcltk','testthat','utils','vegan','whisker','XML','xts','yml')

Got it. So far the setup looks good. Still need to set up security groups and the logins for everyone.