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Created March 19, 2014 23:00
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check_fail
* installing *source* package 'git2r' ...
checking for gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables...
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether we are using the GNU C compiler... yes
checking whether gcc accepts -g... yes
checking for gcc option to accept ISO C89... none needed
checking for inflate in -lz... yes
checking how to run the C preprocessor... gcc -arch x86_64 -std=gnu99 -E
checking for grep that handles long lines and -e... /usr/bin/grep
checking for egrep... /usr/bin/grep -E
checking for ANSI C header files... yes
checking for sys/types.h... yes
checking for sys/stat.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for memory.h... yes
checking for strings.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for unistd.h... yes
checking for size_t... yes
checking for working alloca.h... yes
checking for alloca... yes
checking arpa/inet.h usability... yes
checking arpa/inet.h presence... yes
checking for arpa/inet.h... yes
checking fcntl.h usability... yes
checking fcntl.h presence... yes
checking for fcntl.h... yes
checking for inttypes.h... (cached) yes
checking langinfo.h usability... yes
checking langinfo.h presence... yes
checking for langinfo.h... yes
checking libintl.h usability... no
checking libintl.h presence... no
checking for libintl.h... no
checking limits.h usability... yes
checking limits.h presence... yes
checking for limits.h... yes
checking locale.h usability... yes
checking locale.h presence... yes
checking for locale.h... yes
checking malloc.h usability... no
checking malloc.h presence... no
checking for malloc.h... no
checking netdb.h usability... yes
checking netdb.h presence... yes
checking for netdb.h... yes
checking netinet/in.h usability... yes
checking netinet/in.h presence... yes
checking for netinet/in.h... yes
checking stddef.h usability... yes
checking stddef.h presence... yes
checking for stddef.h... yes
checking for stdint.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for string.h... (cached) yes
checking sys/param.h usability... yes
checking sys/param.h presence... yes
checking for sys/param.h... yes
checking sys/socket.h usability... yes
checking sys/socket.h presence... yes
checking for sys/socket.h... yes
checking sys/time.h usability... yes
checking sys/time.h presence... yes
checking for sys/time.h... yes
checking for unistd.h... (cached) yes
checking wchar.h usability... yes
checking wchar.h presence... yes
checking for wchar.h... yes
checking wctype.h usability... yes
checking wctype.h presence... yes
checking for wctype.h... yes
checking for stdbool.h that conforms to C99... yes
checking for _Bool... yes
checking for inline... inline
checking for int16_t... yes
checking for int32_t... yes
checking for int64_t... yes
checking for int8_t... yes
checking for mode_t... yes
checking for C/C++ restrict keyword... __restrict
checking for size_t... (cached) yes
checking for ssize_t... yes
checking for struct stat.st_rdev... yes
checking for uint16_t... yes
checking for uint32_t... yes
checking for uint64_t... yes
checking for uint8_t... yes
checking for error_at_line... no
checking for stdlib.h... (cached) yes
checking for GNU libc compatible malloc... yes
checking whether time.h and sys/time.h may both be included... yes
checking for sys/time.h... (cached) yes
checking for unistd.h... (cached) yes
checking for stdlib.h... (cached) yes
checking for sys/param.h... (cached) yes
checking for alarm... yes
checking for working mktime... no
checking for getpagesize... yes
checking for working mmap... yes
checking for stdlib.h... (cached) yes
checking for GNU libc compatible realloc... yes
checking for btowc... yes
checking for clock_gettime... no
checking for getcwd... yes
checking for gethostbyname... yes
checking for gettimeofday... yes
checking for isascii... yes
checking for memchr... yes
checking for memmove... yes
checking for memset... yes
checking for munmap... yes
checking for pstat_getdynamic... no
checking for re_comp... no
checking for realpath... yes
checking for regcomp... yes
checking for select... yes
checking for socket... yes
checking for strcasecmp... yes
checking for strchr... yes
checking for strcspn... yes
checking for strdup... yes
checking for strerror... yes
checking for strncasecmp... yes
checking for strrchr... yes
checking for strspn... yes
checking for strstr... yes
checking for strtol... yes
checking for strtoul... yes
configure: creating ./config.status
config.status: creating src/Makevars
** libs
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/attr.c -o libgit2/attr.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/attr_file.c -o libgit2/attr_file.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/blame.c -o libgit2/blame.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/blame_git.c -o libgit2/blame_git.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/blob.c -o libgit2/blob.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/branch.c -o libgit2/branch.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/buffer.c -o libgit2/buffer.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/buf_text.c -o libgit2/buf_text.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/cache.c -o libgit2/cache.o
libgit2/cache.c:55:2: warning: implicit declaration of function 'Rprintf' is invalid in C99 [-Wimplicit-function-declaration]
Rprintf("Cache %p: %d items cached, %d bytes\n",
^
1 warning generated.
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/checkout.c -o libgit2/checkout.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/clone.c -o libgit2/clone.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/commit.c -o libgit2/commit.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/commit_list.c -o libgit2/commit_list.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/compress.c -o libgit2/compress.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/config.c -o libgit2/config.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/config_cache.c -o libgit2/config_cache.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/config_file.c -o libgit2/config_file.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/crlf.c -o libgit2/crlf.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/date.c -o libgit2/date.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/delta-apply.c -o libgit2/delta-apply.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/delta.c -o libgit2/delta.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/diff.c -o libgit2/diff.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/diff_driver.c -o libgit2/diff_driver.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/diff_file.c -o libgit2/diff_file.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/diff_patch.c -o libgit2/diff_patch.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/diff_print.c -o libgit2/diff_print.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/diff_tform.c -o libgit2/diff_tform.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/diff_xdiff.c -o libgit2/diff_xdiff.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/errors.c -o libgit2/errors.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/fetch.c -o libgit2/fetch.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/fetchhead.c -o libgit2/fetchhead.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/filebuf.c -o libgit2/filebuf.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/fileops.c -o libgit2/fileops.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/filter.c -o libgit2/filter.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/fnmatch.c -o libgit2/fnmatch.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/global.c -o libgit2/global.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/graph.c -o libgit2/graph.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/hash.c -o libgit2/hash.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/hashsig.c -o libgit2/hashsig.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/ident.c -o libgit2/ident.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/ignore.c -o libgit2/ignore.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/index.c -o libgit2/index.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/indexer.c -o libgit2/indexer.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/iterator.c -o libgit2/iterator.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/merge.c -o libgit2/merge.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/merge_file.c -o libgit2/merge_file.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/message.c -o libgit2/message.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/mwindow.c -o libgit2/mwindow.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/netops.c -o libgit2/netops.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/notes.c -o libgit2/notes.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/object_api.c -o libgit2/object_api.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/object.c -o libgit2/object.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/odb.c -o libgit2/odb.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/odb_loose.c -o libgit2/odb_loose.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/odb_pack.c -o libgit2/odb_pack.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/oid.c -o libgit2/oid.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/pack.c -o libgit2/pack.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/pack-objects.c -o libgit2/pack-objects.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/path.c -o libgit2/path.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/pathspec.c -o libgit2/pathspec.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/pool.c -o libgit2/pool.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/posix.c -o libgit2/posix.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/pqueue.c -o libgit2/pqueue.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/push.c -o libgit2/push.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/refdb.c -o libgit2/refdb.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/refdb_fs.c -o libgit2/refdb_fs.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/reflog.c -o libgit2/reflog.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/refs.c -o libgit2/refs.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/refspec.c -o libgit2/refspec.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/remote.c -o libgit2/remote.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/repository.c -o libgit2/repository.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/reset.c -o libgit2/reset.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/revert.c -o libgit2/revert.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/revparse.c -o libgit2/revparse.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/revwalk.c -o libgit2/revwalk.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/sha1_lookup.c -o libgit2/sha1_lookup.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/signature.c -o libgit2/signature.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/sortedcache.c -o libgit2/sortedcache.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/stash.c -o libgit2/stash.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/status.c -o libgit2/status.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/strmap.c -o libgit2/strmap.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/submodule.c -o libgit2/submodule.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/tag.c -o libgit2/tag.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/thread-utils.c -o libgit2/thread-utils.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/trace.c -o libgit2/trace.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/transport.c -o libgit2/transport.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/tree.c -o libgit2/tree.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/tree-cache.c -o libgit2/tree-cache.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/tsort.c -o libgit2/tsort.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/util.c -o libgit2/util.o
libgit2/util.c:439:4: warning: implicit declaration of function 'Rprintf' is invalid in C99 [-Wimplicit-function-declaration]
Rprintf("%02X ", (unsigned char)*line & 0xFF);
^
1 warning generated.
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/vector.c -o libgit2/vector.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/hash/hash_generic.c -o libgit2/hash/hash_generic.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c http-parser/http_parser.c -o http-parser/http_parser.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/transports/cred.c -o libgit2/transports/cred.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/transports/cred_helpers.c -o libgit2/transports/cred_helpers.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/transports/git.c -o libgit2/transports/git.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/transports/http.c -o libgit2/transports/http.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/transports/local.c -o libgit2/transports/local.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/transports/smart.c -o libgit2/transports/smart.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/transports/smart_pkt.c -o libgit2/transports/smart_pkt.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/transports/smart_protocol.c -o libgit2/transports/smart_protocol.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/transports/ssh.c -o libgit2/transports/ssh.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/transports/winhttp.c -o libgit2/transports/winhttp.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/unix/map.c -o libgit2/unix/map.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/xdiff/xdiffi.c -o libgit2/xdiff/xdiffi.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/xdiff/xemit.c -o libgit2/xdiff/xemit.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/xdiff/xhistogram.c -o libgit2/xdiff/xhistogram.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/xdiff/xmerge.c -o libgit2/xdiff/xmerge.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/xdiff/xpatience.c -o libgit2/xdiff/xpatience.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/xdiff/xprepare.c -o libgit2/xdiff/xprepare.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c libgit2/xdiff/xutils.c -o libgit2/xdiff/xutils.o
gcc -arch x86_64 -std=gnu99 -I/Library/Frameworks/R.framework/Resources/include -DNDEBUG -I/usr/local/include -I. -I/usr/local/include -Ilibgit2 -Ilibgit2/include -Ihttp-parser -fPIC -mtune=core2 -g -O2 -c git2r.c -o git2r.o
git2r.c:537:34: warning: passing 'const git_commit *' (aka 'const struct git_commit *') to parameter of type 'git_commit *' (aka 'struct git_commit *') discards qualifiers [-Wincompatible-pointer-types-discards-qualifiers]
summary = git_commit_summary(commit);
^~~~~~
libgit2/include/git2/commit.h:128:57: note: passing argument to parameter 'commit' here
GIT_EXTERN(const char *) git_commit_summary(git_commit *commit);
^
1 warning generated.
gcc -arch x86_64 -std=gnu99 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/usr/local/lib -L/usr/local/lib -o git2r.so libgit2/attr.o libgit2/attr_file.o libgit2/blame.o libgit2/blame_git.o libgit2/blob.o libgit2/branch.o libgit2/buffer.o libgit2/buf_text.o libgit2/cache.o libgit2/checkout.o libgit2/clone.o libgit2/commit.o libgit2/commit_list.o libgit2/compress.o libgit2/config.o libgit2/config_cache.o libgit2/config_file.o libgit2/crlf.o libgit2/date.o libgit2/delta-apply.o libgit2/delta.o libgit2/diff.o libgit2/diff_driver.o libgit2/diff_file.o libgit2/diff_patch.o libgit2/diff_print.o libgit2/diff_tform.o libgit2/diff_xdiff.o libgit2/errors.o libgit2/fetch.o libgit2/fetchhead.o libgit2/filebuf.o libgit2/fileops.o libgit2/filter.o libgit2/fnmatch.o libgit2/global.o libgit2/graph.o libgit2/hash.o libgit2/hashsig.o libgit2/ident.o libgit2/ignore.o libgit2/index.o libgit2/indexer.o libgit2/iterator.o libgit2/merge.o libgit2/merge_file.o libgit2/message.o libgit2/mwindow.o libgit2/netops.o libgit2/notes.o libgit2/object_api.o libgit2/object.o libgit2/odb.o libgit2/odb_loose.o libgit2/odb_pack.o libgit2/oid.o libgit2/pack.o libgit2/pack-objects.o libgit2/path.o libgit2/pathspec.o libgit2/pool.o libgit2/posix.o libgit2/pqueue.o libgit2/push.o libgit2/refdb.o libgit2/refdb_fs.o libgit2/reflog.o libgit2/refs.o libgit2/refspec.o libgit2/remote.o libgit2/repository.o libgit2/reset.o libgit2/revert.o libgit2/revparse.o libgit2/revwalk.o libgit2/sha1_lookup.o libgit2/signature.o libgit2/sortedcache.o libgit2/stash.o libgit2/status.o libgit2/strmap.o libgit2/submodule.o libgit2/tag.o libgit2/thread-utils.o libgit2/trace.o libgit2/transport.o libgit2/tree.o libgit2/tree-cache.o libgit2/tsort.o libgit2/util.o libgit2/vector.o libgit2/hash/hash_generic.o http-parser/http_parser.o libgit2/transports/cred.o libgit2/transports/cred_helpers.o libgit2/transports/git.o libgit2/transports/http.o libgit2/transports/local.o libgit2/transports/smart.o libgit2/transports/smart_pkt.o libgit2/transports/smart_protocol.o libgit2/transports/ssh.o libgit2/transports/winhttp.o libgit2/unix/map.o libgit2/xdiff/xdiffi.o libgit2/xdiff/xemit.o libgit2/xdiff/xhistogram.o libgit2/xdiff/xmerge.o libgit2/xdiff/xpatience.o libgit2/xdiff/xprepare.o libgit2/xdiff/xutils.o git2r.o -lz -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
/Applications/Xcode.app/Contents/Developer/Toolchains/XcodeDefault.xctoolchain/usr/bin/nm: no name list
installing to /private/var/folders/2v/fbdjfq9x4_g0gnbr_gqgh7hr0000gn/T/RtmpwpKFT2/git2r.Rcheck/git2r/libs
** R
** inst
** preparing package for lazy loading
Error in reconcilePropertiesAndPrototype(name, slots, prototype, superClasses, :
no definition was found for superclass "git_reference" in the specification of class "git_branch"
Error : unable to load R code in package 'git2r'
ERROR: lazy loading failed for package 'git2r'
* removing '/private/var/folders/2v/fbdjfq9x4_g0gnbr_gqgh7hr0000gn/T/RtmpwpKFT2/git2r.Rcheck/git2r'
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