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October 12, 2017 15:51
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Switching from Base R to tidyverse
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Taken from http://www.significantdigits.org/2017/10/switching-from-base-r-to-tidyverse/ | |
| Base R command | Tidyverse Command | Comment | | |
|-----------------------------------+--------------------------------------------+---------------------------------------------------------------| | |
| read.csv() | read_csv() | also see read_delim(), read_tsv() and readxl::read_xlsx() | | |
| sort(), order() | arrange() | see also order_by() | | |
| mtcars$mpg = ... | mutate() | see also transmute() which drops existing variables | | |
| mtcars[,c(“mpg”, “am”)], subset() | select(), rename() | see also pull() | | |
| mtcars[mtcars$am == 1,], subset() | filter() | | | |
| aggregate() | summarise(), summarize(), do() | see also varaints like summarize_if() | | |
| ifelse() | if_else(), case_when() | see also near() | | |
| unique() | distinct() | | | |
| length(unique()) | n_distinct() | | | |
| sample(), sample.int() | sample_n(), sample_frac() | | | |
| all.equal() | all_equal() | | | |
| merge() | inner_join(), left_join() | see also right_join(), full_join(), semi_join(), anti_join() | | |
| rbind(), cbind() | bind_rows(), bind_cols() | | | |
| x >= left & x <= right | between() | see also near() | | |
| nrow(), sum() | tally(), count(), add_tally(), add_count() | | | |
| c() | combine() | | | |
| extends base R | cumall(), cumany(), cummean() | | | |
| mtcars$mpg[1,] etc | first(), last(), n(), top_n() | | | |
| split(), aggregate() | group_by() | see also ungroup() | | |
| intersect(), union() | intersect(), union() | | | |
| No equivalent command in base R | lead(), lag() | | | |
| ifelse(..., NA) | na_if() | | | |
| switch() | recode() | see also forcats package when dealing with factors | | |
| mtcars[3:5,] | slice() | | | |
| seq_along(), quantile() | row_number(), ntile(), min_ran() etc | | | |
| no easy way | complete(), expand() | often used with nesting(), see also full_seq() | | |
| expand.grid() | crossing() | | | |
| ifelse(is.na(...), ...) | drop_na(), replace_na() | see also fill(), coalesce() | | |
| some mix of paste/strsplit | separate(), unite() | | | |
| reshape2::dcast() | spread() | | | |
| reshape2::melt() | gather() | | | |
| replicate() | rerun() | | | |
| unlist(lapply(x, `[[`, n)) | pluck() | | | |
| lapply(), sapply() | map(), map2() | see also map_chr(), map_lgl(), map_int(), map_dbl(), map_df() | | |
| paste0() | glue() | | |
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