pyradex install log

gistfile1.txt

$ python setup.py install_radex install_myradex build install
/Users/adam/miniconda3/lib/python3.7/distutils/dist.py:274: UserWarning: Unknown distribution option: 'install_requires'
  warnings.warn(msg)
running install_radex
Downloading RADEX
Download succeeded, or at least didn't obviously fail.
Extracting RADEX source from file /Users/adam/.astropy/cache/download/py3/1defa05c60c0df7c847ebc33345310c6
Reading fortran codes...
        Reading file 'main.f' (format:fix,strict)
        Reading file 'radex.inc' (format:fix)
Line #25 in main.f:"      integer niter   ! iteration counter"
        updatevars: could not crack entity declaration "niter!". Ignoring.
Line #26 in main.f:"      integer imore   ! are we running again?"
        updatevars: could not crack entity declaration "imore!". Ignoring.
Line #26 in main.f:"      integer imore   ! are we running again?"
        updatevars: could not crack entity declaration "again?". Ignoring.
Line #29 in main.f:"      logical conv    ! are we converged?"
        updatevars: could not crack entity declaration "conv!". Ignoring.
Line #29 in main.f:"      logical conv    ! are we converged?"
        updatevars: attempt to change the type of "are" ("integer") to "logical". Ignoring.
Line #29 in main.f:"      logical conv    ! are we converged?"
        updatevars: attempt to change the type of "we" ("integer") to "logical". Ignoring.
Line #29 in main.f:"      logical conv    ! are we converged?"
        updatevars: could not crack entity declaration "converged?". Ignoring.
        Reading file 'background.f' (format:fix,strict)
        Reading file 'radex.inc' (format:fix)
        Reading file 'radex.inc' (format:fix)
        Reading file 'slatec.f' (format:fix,strict)
        Reading file 'matrix.f' (format:fix,strict)
        Reading file 'radex.inc' (format:fix)
Line #25 in matrix.f:"      integer niter            ! iteration counter"
        updatevars: could not crack entity declaration "niter!". Ignoring.
Line #26 in matrix.f:"      integer ilev,jlev,klev   ! to loop over energy levels"
        updatevars: could not crack entity declaration "klev!". Ignoring.
Line #27 in matrix.f:"      integer nplus            ! to solve statistical equilibrium"
        updatevars: could not crack entity declaration "nplus!". Ignoring.
Line #28 in matrix.f:"      integer iline            ! to loop over lines"
        updatevars: could not crack entity declaration "iline!". Ignoring.
Line #29 in matrix.f:"      integer m,n              ! line upper/lower levels"
        updatevars: could not crack entity declaration "n!". Ignoring.
Line #29 in matrix.f:"      integer m,n              ! line upper/lower levels"
        updatevars: could not crack entity declaration "upper/lower". Ignoring.
Line #30 in matrix.f:"      integer nthick           ! counts optically thick lines"
        updatevars: could not crack entity declaration "nthick!". Ignoring.
Line #31 in matrix.f:"      integer nfat             ! counts highly optically thick lines"
        updatevars: could not crack entity declaration "nfat!". Ignoring.
Line #32 in matrix.f:"      integer nreduce          ! size of reduced rate matrix"
        updatevars: could not crack entity declaration "nreduce!". Ignoring.
rmbadname1: Replacing "size" with "size_bn".
Line #34 in matrix.f:"      integer indx,dsign       ! needed for NumRep equation solver"
        updatevars: could not crack entity declaration "dsign!". Ignoring.
rmbadname1: Replacing "for" with "for_bn".
Line #35 in matrix.f:"      real*8 rhs(maxlev)           ! RHS of rate equation"
        updatevars: could not crack entity declaration "rhs(maxlev)!". Ignoring.
Line #35 in matrix.f:"      real*8 rhs(maxlev)           ! RHS of rate equation"
        updatevars: attempt to change the type of "of" ("integer") to "real". Ignoring.
Line #35 in matrix.f:"      real*8 rhs(maxlev)           ! RHS of rate equation"
        updatevars: attempt to change the type of "rate" ("integer") to "real". Ignoring.
Line #35 in matrix.f:"      real*8 rhs(maxlev)           ! RHS of rate equation"
        updatevars: attempt to change the type of "equation" ("integer") to "real". Ignoring.
Line #37 in matrix.f:"      real*8 yrate(maxlev,maxlev)  ! rate matrix"
        updatevars: could not crack entity declaration "yrate(maxlev,maxlev)!". Ignoring.
Line #37 in matrix.f:"      real*8 yrate(maxlev,maxlev)  ! rate matrix"
        updatevars: attempt to change the type of "rate" ("integer") to "real". Ignoring.
Line #37 in matrix.f:"      real*8 yrate(maxlev,maxlev)  ! rate matrix"
        updatevars: attempt to change the type of "matrix" ("integer") to "real". Ignoring.
Line #38 in matrix.f:"      real*8 etr,exr               ! to calculate radiative rates"
        updatevars: could not crack entity declaration "exr!". Ignoring.
Line #38 in matrix.f:"      real*8 etr,exr               ! to calculate radiative rates"
        updatevars: attempt to change the type of "to" ("integer") to "real". Ignoring.
Line #39 in matrix.f:"      real*8 xt                    ! frequency cubed"
        updatevars: could not crack entity declaration "xt!". Ignoring.
Line #40 in matrix.f:"      real*8 hnu                   ! photon energy"
        updatevars: could not crack entity declaration "hnu!". Ignoring.
Line #40 in matrix.f:"      real*8 hnu                   ! photon energy"
        updatevars: attempt to change the type of "energy" ("integer") to "real". Ignoring.
Line #41 in matrix.f:"      real*8 bnutex                ! line source function"
        updatevars: could not crack entity declaration "bnutex!". Ignoring.
Line #41 in matrix.f:"      real*8 bnutex                ! line source function"
        updatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.
Line #42 in matrix.f:"      real*8 cddv                  ! N(mol) / delta V"
        updatevars: could not crack entity declaration "cddv!". Ignoring.
Line #42 in matrix.f:"      real*8 cddv                  ! N(mol) / delta V"
        updatevars: attempt to change the type of "n" ("integer") to "real". Ignoring.
Line #42 in matrix.f:"      real*8 cddv                  ! N(mol) / delta V"
        updatevars: could not crack entity declaration "n(mol)/delta". Ignoring.
Line #43 in matrix.f:"      real*8 beta,escprob          ! escape probability"
        updatevars: could not crack entity declaration "escprob!". Ignoring.
Line #45 in matrix.f:"      real*8 bnu                   ! Planck function"
        updatevars: could not crack entity declaration "bnu!". Ignoring.
Line #46 in matrix.f:"      real*8 uarray(maxlev,maxlev) ! reduced rate matrix"
        updatevars: could not crack entity declaration "uarray(maxlev,maxlev)!". Ignoring.
Line #46 in matrix.f:"      real*8 uarray(maxlev,maxlev) ! reduced rate matrix"
        updatevars: attempt to change the type of "reduced" ("integer") to "real". Ignoring.
Line #46 in matrix.f:"      real*8 uarray(maxlev,maxlev) ! reduced rate matrix"
        updatevars: attempt to change the type of "rate" ("integer") to "real". Ignoring.
Line #46 in matrix.f:"      real*8 uarray(maxlev,maxlev) ! reduced rate matrix"
        updatevars: attempt to change the type of "matrix" ("integer") to "real". Ignoring.
Line #47 in matrix.f:"      real*8 redcrit               ! reduction criterion"
        updatevars: could not crack entity declaration "redcrit!". Ignoring.
Line #48 in matrix.f:"      real*8 sumx                  ! summed radiative rate"
        updatevars: could not crack entity declaration "sumx!". Ignoring.
Line #48 in matrix.f:"      real*8 sumx                  ! summed radiative rate"
        updatevars: attempt to change the type of "rate" ("integer") to "real". Ignoring.
Line #49 in matrix.f:"      real*8 total                 ! to normalize populations"
        updatevars: could not crack entity declaration "total!". Ignoring.
Line #49 in matrix.f:"      real*8 total                 ! to normalize populations"
        updatevars: attempt to change the type of "to" ("integer") to "real". Ignoring.
Line #51 in matrix.f:"      real*8 tsum,thistex          ! to check convergence"
        updatevars: could not crack entity declaration "thistex!". Ignoring.
Line #51 in matrix.f:"      real*8 tsum,thistex          ! to check convergence"
        updatevars: attempt to change the type of "to" ("integer") to "real". Ignoring.
Line #54 in matrix.f:"      logical conv                 ! are we converged?"
        updatevars: could not crack entity declaration "conv!". Ignoring.
Line #54 in matrix.f:"      logical conv                 ! are we converged?"
        updatevars: could not crack entity declaration "converged?". Ignoring.
        Reading file 'radex.inc' (format:fix)
Line #329 in matrix.f:"      real*8 taur  !optical radius"
        updatevars: could not crack entity declaration "taur!optical". Ignoring.
        Reading file 'io.f' (format:fix,strict)
        Reading file 'radex.inc' (format:fix)
Line #24 in io.f:"      integer length       ! subroutine to determine"
        updatevars: could not crack entity declaration "length!". Ignoring.
Line #26 in io.f:"      integer ipart        ! loop over collision partners"
        updatevars: could not crack entity declaration "ipart!". Ignoring.
Line #27 in io.f:"      character*10 partner ! name of collision partner"
        updatevars: no name pattern found for entity='!'. Skipping.
Line #27 in io.f:"      character*10 partner ! name of collision partner"
        updatevars: attempt to change the type of "collision" ("integer") to "character". Ignoring.
updatevars:collision: attempt to change empty charselector to {'*': '10'}. Ignoring.
Line #30 in io.f:"      integer id           ! ID code of collision partner"
        updatevars: could not crack entity declaration "id!". Ignoring.
Line #30 in io.f:"      integer id           ! ID code of collision partner"
        updatevars: attempt to change the type of "of" ("character") to "integer". Ignoring.
Line #30 in io.f:"      integer id           ! ID code of collision partner"
        updatevars: attempt to change the type of "partner" ("character") to "integer". Ignoring.
        Reading file 'radex.inc' (format:fix)
Line #162 in io.f:"      integer ipart  ! to loop over collision partners"
        updatevars: could not crack entity declaration "ipart!". Ignoring.
        Reading file 'radex.inc' (format:fix)
Line #201 in io.f:"      integer iline    ! to loop over lines"
        updatevars: could not crack entity declaration "iline!". Ignoring.
Line #202 in io.f:"      integer m,n      ! upper & lower level of the line"
        updatevars: could not crack entity declaration "n!". Ignoring.
Line #202 in io.f:"      integer m,n      ! upper & lower level of the line"
        updatevars: no name pattern found for entity='&'. Skipping.
Line #204 in io.f:"      integer niter    ! final number of iterations"
        updatevars: could not crack entity declaration "niter!". Ignoring.
Line #208 in io.f:"      real*8 xt        ! frequency cubed"
        updatevars: could not crack entity declaration "xt!". Ignoring.
Line #209 in io.f:"      real*8 hnu       ! photon energy"
        updatevars: could not crack entity declaration "hnu!". Ignoring.
Line #210 in io.f:"      real*8 bnutex    ! line source function"
        updatevars: could not crack entity declaration "bnutex!". Ignoring.
Line #210 in io.f:"      real*8 bnutex    ! line source function"
        updatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.
Line #211 in io.f:"      real*8 ftau      ! exp(-tau)"
        updatevars: could not crack entity declaration "ftau!". Ignoring.
Line #212 in io.f:"      real*8 toti      ! background intensity"
        updatevars: could not crack entity declaration "toti!". Ignoring.
Line #213 in io.f:"      real*8 tbl       ! black body temperature"
        updatevars: could not crack entity declaration "tbl!". Ignoring.
Line #214 in io.f:"      real*8 wh        ! Planck correction"
        updatevars: could not crack entity declaration "wh!". Ignoring.
Line #215 in io.f:"      real*8 tback     ! background temperature"
        updatevars: could not crack entity declaration "tback!". Ignoring.
Line #216 in io.f:"      real*8 ta        ! line antenna temperature"
        updatevars: could not crack entity declaration "ta!". Ignoring.
Line #216 in io.f:"      real*8 ta        ! line antenna temperature"
        updatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.
Line #217 in io.f:"      real*8 tr        ! line radiation temperature"
        updatevars: could not crack entity declaration "tr!". Ignoring.
Line #217 in io.f:"      real*8 tr        ! line radiation temperature"
        updatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.
Line #218 in io.f:"      real*8 beta,escprob ! escape probability"
        updatevars: no name pattern found for entity='!'. Skipping.
Line #220 in io.f:"      real*8 bnu       ! Planck function"
        updatevars: could not crack entity declaration "bnu!". Ignoring.
Line #221 in io.f:"      real*8 kkms      ! line integrated intensity (K km/s)"
        updatevars: could not crack entity declaration "kkms!". Ignoring.
Line #221 in io.f:"      real*8 kkms      ! line integrated intensity (K km/s)"
        updatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.
Line #222 in io.f:"      real*8 ergs      ! line flux (erg / s / cm^2)"
        updatevars: could not crack entity declaration "ergs!". Ignoring.
Line #222 in io.f:"      real*8 ergs      ! line flux (erg / s / cm^2)"
        updatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.
Line #227 in io.f:"      real*8 wavel     ! line wavelength (micron)"
        updatevars: could not crack entity declaration "wavel!". Ignoring.
Line #227 in io.f:"      real*8 wavel     ! line wavelength (micron)"
        updatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.
        Reading file 'readdata.f' (format:fix,strict)
        Reading file 'radex.inc' (format:fix)
Line #25 in readdata.f:"      integer ilev,jlev   ! to loop over energy levels"
        updatevars: could not crack entity declaration "jlev!". Ignoring.
Line #26 in readdata.f:"      integer iline       ! to loop over lines"
        updatevars: could not crack entity declaration "iline!". Ignoring.
Line #27 in readdata.f:"      integer ipart,jpart ! to loop over collision partners"
        updatevars: no name pattern found for entity='!'. Skipping.
Line #28 in readdata.f:"      integer itemp       ! to loop over collision temperatures"
        updatevars: could not crack entity declaration "itemp!". Ignoring.
Line #29 in readdata.f:"      integer icoll       ! to loop over collisional transitions"
        updatevars: could not crack entity declaration "icoll!". Ignoring.
Line #31 in readdata.f:"      integer dummy       ! to skip part of the file"
        updatevars: could not crack entity declaration "dummy!". Ignoring.
Line #34 in readdata.f:"      integer id(maxpart)      ! to identify collision partners"
        updatevars: could not crack entity declaration "id(maxpart)!". Ignoring.
Line #40 in readdata.f:"      real*8 temp(maxtemp) ! collision temperatures"
        updatevars: could not crack entity declaration "temp(maxtemp)!". Ignoring.
Line #40 in readdata.f:"      real*8 temp(maxtemp) ! collision temperatures"
        updatevars: attempt to change the type of "collision" ("integer") to "real". Ignoring.
Line #40 in readdata.f:"      real*8 temp(maxtemp) ! collision temperatures"
        updatevars: attempt to change the type of "temperatures" ("integer") to "real". Ignoring.
Line #43 in readdata.f:"      character*120 collref ! text about source of collisional data"
        updatevars: no name pattern found for entity='!'. Skipping.
Line #43 in readdata.f:"      character*120 collref ! text about source of collisional data"
        updatevars: attempt to change the type of "of" ("integer") to "character". Ignoring.
updatevars:of: attempt to change empty charselector to {'*': '120'}. Ignoring.
Line #43 in readdata.f:"      character*120 collref ! text about source of collisional data"
        updatevars: attempt to change the type of "collisional" ("integer") to "character". Ignoring.
updatevars:collisional: attempt to change empty charselector to {'*': '120'}. Ignoring.
Post-processing...
        Block: radex
analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
        Block: backrad
analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
        Block: galbr
analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
        Block: splcoeff
        Block: splintrp
        Block: ludcmp
        Block: lubksb
        Block: sgeir
        Block: r1mach
        Block: sasum
        Block: scopy
        Block: sdsdot
        Block: sgefa
        Block: isamax
        Block: saxpy
        Block: sscal
        Block: sgesl
        Block: sdot
        Block: xermsg
        Block: j4save
        Block: xercnt
        Block: xerhlt
        Block: xerprn
        Block: i1mach
        Block: xgetua
        Block: xersve
analyzevars: character array "character*8 libtab(10)" is considered as "character libtab(10,8)"; "intent(c)" is forced.
analyzevars: character array "character*8 subtab(10)" is considered as "character subtab(10,8)"; "intent(c)" is forced.
analyzevars: character array "character*20 mestab(10)" is considered as "character mestab(10,20)"; "intent(c)" is forced.
        Block: fdump
        Block: matrix
analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
        Block: escprob
analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
        Block: getinputs
analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
        Block: defaults
analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
        Block: length
        Block: output
analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
In: io.f:output
        getarrlen:variable "micron" undefined
        Block: readdata
analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
Post-processing (stage 2)...
Saving signatures to file "./radex.pyf"
rmbadname1: Replacing "size" with "size_bn".
rmbadname1: Replacing "for" with "for_bn".
updatevars:collision: attempt to change empty charselector to {'*': '10'}. Ignoring.
updatevars:of: attempt to change empty charselector to {'*': '120'}. Ignoring.
updatevars:collisional: attempt to change empty charselector to {'*': '120'}. Ignoring.
analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
analyzevars: character array "character*8 libtab(10)" is considered as "character libtab(10,8)"; "intent(c)" is forced.
analyzevars: character array "character*8 subtab(10)" is considered as "character subtab(10,8)"; "intent(c)" is forced.
analyzevars: character array "character*20 mestab(10)" is considered as "character mestab(10,20)"; "intent(c)" is forced.
analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
analyzevars: character array "character*6 qnum(2999)" is considered as "character qnum(2999,6)"; "intent(c)" is forced.
In file included from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1824:0,
                 from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/fortranobject.h:13,
                 from /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/fortranobject.c:2:
/Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 #warning "Using deprecated NumPy API, disable it with " \
  ^
In file included from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1824:0,
                 from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/fortranobject.h:13,
                 from /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/radexmodule.c:16:
/Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 #warning "Using deprecated NumPy API, disable it with " \
  ^
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/radexmodule.c:177:12: warning: ‘f2py_size’ defined but not used [-Wunused-function]
 static int f2py_size(PyArrayObject* var, ...)
            ^
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Warning: Nonconforming tab character in column 1 of line 6581
Warning: Nonconforming tab character in column 1 of line 6582
Warning: Nonconforming tab character in column 1 of line 6591
Warning: Nonconforming tab character in column 1 of line 6592
Warning: Nonconforming tab character in column 1 of line 6593
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:492.72:

      if (h.eq.0.d0) pause 'Warning: bad xin input in splintrp '
                                                                        1
Warning: Deleted feature: PAUSE statement at (1)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4022.31:

        real*8 xpopold(maxlev)
                               1
Warning: Nonconforming tab character at (1)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4395.3:

 41   write(*,21) 'Minimum and maximum output frequency [GHz] ? '
   1
Warning: Label 41 at (1) defined but not used
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4388.62:

     $     molfile = radat(1:length(radat))//molfile(1:length(molfile))
                                                              1
Warning: Character length of actual argument shorter than of dummy argument 'str' (120/200) at (1)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4388.36:

     $     molfile = radat(1:length(radat))//molfile(1:length(molfile))
                                    1
Warning: Character length of actual argument shorter than of dummy argument 'str' (120/200) at (1)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4389.36:

      write(13,20) molfile(1:length(molfile))
                                    1
Warning: Character length of actual argument shorter than of dummy argument 'str' (120/200) at (1)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4393.36:

      write(13,20) outfile(1:length(outfile))
                                    1
Warning: Character length of actual argument shorter than of dummy argument 'str' (120/200) at (1)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4193.42:

      call ludcmp(uarray,nreduce+1,maxlev,indx,dsign)
                                          1
Warning: Rank mismatch in argument 'indx' at (1) (rank-1 and scalar)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:776.12:

      IND = -LOG10(MAX(R1MACH(4),DNORM/XNORM))
            1
Warning: Possible change of value in conversion from REAL(8) to INTEGER(4) at (1)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4194.42:

      call lubksb(uarray,nreduce+1,maxlev,indx,rhs)
                                          1
Warning: Rank mismatch in argument 'indx' at (1) (rank-1 and scalar)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4211.40:

         call ludcmp(yrate,nplus,maxlev,indx,dsign)
                                        1
Warning: Rank mismatch in argument 'indx' at (1) (rank-1 and scalar)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4212.40:

         call lubksb(yrate,nplus,maxlev,indx,rhs)
                                        1
Warning: Rank mismatch in argument 'indx' at (1) (rank-1 and scalar)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4575.31:

     $      //version(1:length(version))
                               1
Warning: Character length of actual argument shorter than of dummy argument 'str' (20/200) at (1)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:547.35:

      SUBROUTINE lubksb(a,n,np,indx,b)
                                   1
Warning: Unused dummy argument 'indx' at (1)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:537.25:

      SUBROUTINE ludcmp(a,n,np,indx,d)
                         1
Warning: Unused dummy argument 'a' at (1)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:537.37:

      SUBROUTINE ludcmp(a,n,np,indx,d)
                                     1
Warning: Unused dummy argument 'd' at (1)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:537.35:

      SUBROUTINE ludcmp(a,n,np,indx,d)
                                   1
Warning: Unused dummy argument 'indx' at (1)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:2564.30:

      SUBROUTINE XERHLT (MESSG)
                              1
Warning: Unused dummy argument 'messg' at (1)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:2502.67:

      SUBROUTINE XERCNT (LIBRAR, SUBROU, MESSG, NERR, LEVEL, KONTRL)
                                                                   1
Warning: Unused dummy argument 'kontrl' at (1)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:2502.59:

      SUBROUTINE XERCNT (LIBRAR, SUBROU, MESSG, NERR, LEVEL, KONTRL)
                                                           1
Warning: Unused dummy argument 'level' at (1)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:2502.31:

      SUBROUTINE XERCNT (LIBRAR, SUBROU, MESSG, NERR, LEVEL, KONTRL)
                               1
Warning: Unused dummy argument 'librar' at (1)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:2502.46:

      SUBROUTINE XERCNT (LIBRAR, SUBROU, MESSG, NERR, LEVEL, KONTRL)
                                              1
Warning: Unused dummy argument 'messg' at (1)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:2502.52:

      SUBROUTINE XERCNT (LIBRAR, SUBROU, MESSG, NERR, LEVEL, KONTRL)
                                                    1
Warning: Unused dummy argument 'nerr' at (1)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:2502.39:

      SUBROUTINE XERCNT (LIBRAR, SUBROU, MESSG, NERR, LEVEL, KONTRL)
                                       1
Warning: Unused dummy argument 'subrou' at (1)
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f: In function ‘matrix’:
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4266:0: warning: ‘cddv’ may be used uninitialized in this function [-Wmaybe-uninitialized]
      $         /(fgaus*xt/aeinst(iline))
 ^
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f: In function ‘readdata’:
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:4847:0: warning: ‘nint’ may be used uninitialized in this function [-Wmaybe-uninitialized]
                   tlow=temp(nint)
 ^
b'Unknown vendor: "gfortran"\nrunning build\nrunning config_cc\nunifing config_cc, config, build_clib, build_ext, build commands --compiler options\nrunning config_fc\nunifing config_fc, config, build_clib, build_ext, build commands --fcompiler options\nrunning build_src\nbuild_src\nbuilding extension "radex" sources\nf2py options: []\nf2py:> /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/radexmodule.c\ncreating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7\nReading fortran codes...\n\tReading file \'/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f\' (format:fix,strict)\n\tReading file \'radex.inc\' (format:fix)\nLine #25 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer niter   ! iteration counter"\n\tupdatevars: could not crack entity declaration "niter!". Ignoring.\nLine #26 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer imore   ! are we running again?"\n\tupdatevars: could not crack entity declaration "imore!". Ignoring.\nLine #26 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer imore   ! are we running again?"\n\tupdatevars: could not crack entity declaration "again?". Ignoring.\nLine #29 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      logical conv    ! are we converged?"\n\tupdatevars: could not crack entity declaration "conv!". Ignoring.\nLine #29 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      logical conv    ! are we converged?"\n\tupdatevars: attempt to change the type of "are" ("integer") to "logical". Ignoring.\nLine #29 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      logical conv    ! are we converged?"\n\tupdatevars: attempt to change the type of "we" ("integer") to "logical". Ignoring.\nLine #29 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      logical conv    ! are we converged?"\n\tupdatevars: could not crack entity declaration "converged?". Ignoring.\n\tReading file \'radex.inc\' (format:fix)\n\tReading file \'radex.inc\' (format:fix)\n\tReading file \'radex.inc\' (format:fix)\nLine #3992 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer niter            ! iteration counter"\n\tupdatevars: could not crack entity declaration "niter!". Ignoring.\nLine #3993 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer ilev,jlev,klev   ! to loop over energy levels"\n\tupdatevars: could not crack entity declaration "klev!". Ignoring.\nLine #3994 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer nplus            ! to solve statistical equilibrium"\n\tupdatevars: could not crack entity declaration "nplus!". Ignoring.\nLine #3995 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer iline            ! to loop over lines"\n\tupdatevars: could not crack entity declaration "iline!". Ignoring.\nLine #3996 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer m,n              ! line upper/lower levels"\n\tupdatevars: could not crack entity declaration "n!". Ignoring.\nLine #3996 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer m,n              ! line upper/lower levels"\n\tupdatevars: could not crack entity declaration "upper/lower". Ignoring.\nLine #3997 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer nthick           ! counts optically thick lines"\n\tupdatevars: could not crack entity declaration "nthick!". Ignoring.\nLine #3998 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer nfat             ! counts highly optically thick lines"\n\tupdatevars: could not crack entity declaration "nfat!". Ignoring.\nLine #3999 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer nreduce          ! size of reduced rate matrix"\n\tupdatevars: could not crack entity declaration "nreduce!". Ignoring.\nLine #4001 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer indx,dsign       ! needed for NumRep equation solver"\n\tupdatevars: could not crack entity declaration "dsign!". Ignoring.\nLine #4002 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 rhs(maxlev)           ! RHS of rate equation"\n\tupdatevars: could not crack entity declaration "rhs(maxlev)!". Ignoring.\nLine #4002 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 rhs(maxlev)           ! RHS of rate equation"\n\tupdatevars: attempt to change the type of "of" ("integer") to "real". Ignoring.\nLine #4002 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 rhs(maxlev)           ! RHS of rate equation"\n\tupdatevars: attempt to change the type of "rate" ("integer") to "real". Ignoring.\nLine #4002 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 rhs(maxlev)           ! RHS of rate equation"\n\tupdatevars: attempt to change the type of "equation" ("integer") to "real". Ignoring.\nLine #4004 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 yrate(maxlev,maxlev)  ! rate matrix"\n\tupdatevars: could not crack entity declaration "yrate(maxlev,maxlev)!". Ignoring.\nLine #4004 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 yrate(maxlev,maxlev)  ! rate matrix"\n\tupdatevars: attempt to change the type of "rate" ("integer") to "real". Ignoring.\nLine #4004 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 yrate(maxlev,maxlev)  ! rate matrix"\n\tupdatevars: attempt to change the type of "matrix" ("integer") to "real". Ignoring.\nLine #4005 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 etr,exr               ! to calculate radiative rates"\n\tupdatevars: could not crack entity declaration "exr!". Ignoring.\nLine #4005 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 etr,exr               ! to calculate radiative rates"\n\tupdatevars: attempt to change the type of "to" ("integer") to "real". Ignoring.\nLine #4006 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 xt                    ! frequency cubed"\n\tupdatevars: could not crack entity declaration "xt!". Ignoring.\nLine #4007 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 hnu                   ! photon energy"\n\tupdatevars: could not crack entity declaration "hnu!". Ignoring.\nLine #4007 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 hnu                   ! photon energy"\n\tupdatevars: attempt to change the type of "energy" ("integer") to "real". Ignoring.\nLine #4008 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 bnutex                ! line source function"\n\tupdatevars: could not crack entity declaration "bnutex!". Ignoring.\nLine #4008 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 bnutex                ! line source function"\n\tupdatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.\nLine #4009 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 cddv                  ! N(mol) / delta V"\n\tupdatevars: could not crack entity declaration "cddv!". Ignoring.\nLine #4009 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 cddv                  ! N(mol) / delta V"\n\tupdatevars: attempt to change the type of "n" ("integer") to "real". Ignoring.\nLine #4009 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 cddv                  ! N(mol) / delta V"\n\tupdatevars: could not crack entity declaration "n(mol)/delta". Ignoring.\nLine #4010 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 beta,escprob          ! escape probability"\n\tupdatevars: could not crack entity declaration "escprob!". Ignoring.\nLine #4012 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 bnu                   ! Planck function"\n\tupdatevars: could not crack entity declaration "bnu!". Ignoring.\nLine #4013 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 uarray(maxlev,maxlev) ! reduced rate matrix"\n\tupdatevars: could not crack entity declaration "uarray(maxlev,maxlev)!". Ignoring.\nLine #4013 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 uarray(maxlev,maxlev) ! reduced rate matrix"\n\tupdatevars: attempt to change the type of "reduced" ("integer") to "real". Ignoring.\nLine #4013 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 uarray(maxlev,maxlev) ! reduced rate matrix"\n\tupdatevars: attempt to change the type of "rate" ("integer") to "real". Ignoring.\nLine #4013 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 uarray(maxlev,maxlev) ! reduced rate matrix"\n\tupdatevars: attempt to change the type of "matrix" ("integer") to "real". Ignoring.\nLine #4014 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 redcrit               ! reduction criterion"\n\tupdatevars: could not crack entity declaration "redcrit!". Ignoring.\nLine #4015 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 sumx                  ! summed radiative rate"\n\tupdatevars: could not crack entity declaration "sumx!". Ignoring.\nLine #4015 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 sumx                  ! summed radiative rate"\n\tupdatevars: attempt to change the type of "rate" ("integer") to "real". Ignoring.\nLine #4016 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 total                 ! to normalize populations"\n\tupdatevars: could not crack entity declaration "total!". Ignoring.\nLine #4016 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 total                 ! to normalize populations"\n\tupdatevars: attempt to change the type of "to" ("integer") to "real". Ignoring.\nLine #4018 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 tsum,thistex          ! to check convergence"\n\tupdatevars: could not crack entity declaration "thistex!". Ignoring.\nLine #4018 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 tsum,thistex          ! to check convergence"\n\tupdatevars: attempt to change the type of "to" ("integer") to "real". Ignoring.\nLine #4021 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      logical conv                 ! are we converged?"\n\tupdatevars: could not crack entity declaration "conv!". Ignoring.\nLine #4021 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      logical conv                 ! are we converged?"\n\tupdatevars: could not crack entity declaration "converged?". Ignoring.\n\tReading file \'radex.inc\' (format:fix)\nLine #4296 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 taur  !optical radius"\n\tupdatevars: could not crack entity declaration "taur!optical". Ignoring.\n\tReading file \'radex.inc\' (format:fix)\nLine #4365 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer length       ! subroutine to determine"\n\tupdatevars: could not crack entity declaration "length!". Ignoring.\nLine #4367 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer ipart        ! loop over collision partners"\n\tupdatevars: could not crack entity declaration "ipart!". Ignoring.\nLine #4368 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      character*10 partner ! name of collision partner"\n\tupdatevars: no name pattern found for entity=\'!\'. Skipping.\nLine #4368 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      character*10 partner ! name of collision partner"\n\tupdatevars: attempt to change the type of "collision" ("integer") to "character". Ignoring.\nLine #4371 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer id           ! ID code of collision partner"\n\tupdatevars: could not crack entity declaration "id!". Ignoring.\nLine #4371 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer id           ! ID code of collision partner"\n\tupdatevars: attempt to change the type of "of" ("character") to "integer". Ignoring.\nLine #4371 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer id           ! ID code of collision partner"\n\tupdatevars: attempt to change the type of "partner" ("character") to "integer". Ignoring.\n\tReading file \'radex.inc\' (format:fix)\nLine #4503 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer ipart  ! to loop over collision partners"\n\tupdatevars: could not crack entity declaration "ipart!". Ignoring.\n\tReading file \'radex.inc\' (format:fix)\nLine #4542 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer iline    ! to loop over lines"\n\tupdatevars: could not crack entity declaration "iline!". Ignoring.\nLine #4543 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer m,n      ! upper & lower level of the line"\n\tupdatevars: could not crack entity declaration "n!". Ignoring.\nLine #4543 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer m,n      ! upper & lower level of the line"\n\tupdatevars: no name pattern found for entity=\'&\'. Skipping.\nLine #4545 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer niter    ! final number of iterations"\n\tupdatevars: could not crack entity declaration "niter!". Ignoring.\nLine #4549 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 xt        ! frequency cubed"\n\tupdatevars: could not crack entity declaration "xt!". Ignoring.\nLine #4550 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 hnu       ! photon energy"\n\tupdatevars: could not crack entity declaration "hnu!". Ignoring.\nLine #4551 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 bnutex    ! line source function"\n\tupdatevars: could not crack entity declaration "bnutex!". Ignoring.\nLine #4551 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 bnutex    ! line source function"\n\tupdatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.\nLine #4552 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 ftau      ! exp(-tau)"\n\tupdatevars: could not crack entity declaration "ftau!". Ignoring.\nLine #4553 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 toti      ! background intensity"\n\tupdatevars: could not crack entity declaration "toti!". Ignoring.\nLine #4554 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 tbl       ! black body temperature"\n\tupdatevars: could not crack entity declaration "tbl!". Ignoring.\nLine #4555 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 wh        ! Planck correction"\n\tupdatevars: could not crack entity declaration "wh!". Ignoring.\nLine #4556 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 tback     ! background temperature"\n\tupdatevars: could not crack entity declaration "tback!". Ignoring.\nLine #4557 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 ta        ! line antenna temperature"\n\tupdatevars: could not crack entity declaration "ta!". Ignoring.\nLine #4557 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 ta        ! line antenna temperature"\n\tupdatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.\nLine #4558 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 tr        ! line radiation temperature"\n\tupdatevars: could not crack entity declaration "tr!". Ignoring.\nLine #4558 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 tr        ! line radiation temperature"\n\tupdatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.\nLine #4559 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 beta,escprob ! escape probability"\n\tupdatevars: no name pattern found for entity=\'!\'. Skipping.\nLine #4561 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 bnu       ! Planck function"\n\tupdatevars: could not crack entity declaration "bnu!". Ignoring.\nLine #4562 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 kkms      ! line integrated intensity (K km/s)"\n\tupdatevars: could not crack entity declaration "kkms!". Ignoring.\nLine #4562 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 kkms      ! line integrated intensity (K km/s)"\n\tupdatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.\nLine #4563 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 ergs      ! line flux (erg / s / cm^2)"\n\tupdatevars: could not crack entity declaration "ergs!". Ignoring.\nLine #4563 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 ergs      ! line flux (erg / s / cm^2)"\n\tupdatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.\nLine #4568 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 wavel     ! line wavelength (micron)"\n\tupdatevars: could not crack entity declaration "wavel!". Ignoring.\nLine #4568 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 wavel     ! line wavelength (micron)"\n\tupdatevars: attempt to change the type of "line" ("integer") to "real". Ignoring.\n\tReading file \'radex.inc\' (format:fix)\nLine #4718 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer ilev,jlev   ! to loop over energy levels"\n\tupdatevars: could not crack entity declaration "jlev!". Ignoring.\nLine #4719 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer iline       ! to loop over lines"\n\tupdatevars: could not crack entity declaration "iline!". Ignoring.\nLine #4720 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer ipart,jpart ! to loop over collision partners"\n\tupdatevars: no name pattern found for entity=\'!\'. Skipping.\nLine #4721 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer itemp       ! to loop over collision temperatures"\n\tupdatevars: could not crack entity declaration "itemp!". Ignoring.\nLine #4722 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer icoll       ! to loop over collisional transitions"\n\tupdatevars: could not crack entity declaration "icoll!". Ignoring.\nLine #4724 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer dummy       ! to skip part of the file"\n\tupdatevars: could not crack entity declaration "dummy!". Ignoring.\nLine #4727 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      integer id(maxpart)      ! to identify collision partners"\n\tupdatevars: could not crack entity declaration "id(maxpart)!". Ignoring.\nLine #4733 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 temp(maxtemp) ! collision temperatures"\n\tupdatevars: could not crack entity declaration "temp(maxtemp)!". Ignoring.\nLine #4733 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 temp(maxtemp) ! collision temperatures"\n\tupdatevars: attempt to change the type of "collision" ("integer") to "real". Ignoring.\nLine #4733 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      real*8 temp(maxtemp) ! collision temperatures"\n\tupdatevars: attempt to change the type of "temperatures" ("integer") to "real". Ignoring.\nLine #4736 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      character*120 collref ! text about source of collisional data"\n\tupdatevars: no name pattern found for entity=\'!\'. Skipping.\nLine #4736 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      character*120 collref ! text about source of collisional data"\n\tupdatevars: attempt to change the type of "of" ("integer") to "character". Ignoring.\nLine #4736 in /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:"      character*120 collref ! text about source of collisional data"\n\tupdatevars: attempt to change the type of "collisional" ("integer") to "character". Ignoring.\nPost-processing...\n\tBlock: radex\n\t\t\tBlock: radex\n\t\t\tBlock: backrad\n\t\t\tBlock: galbr\n\t\t\tBlock: splcoeff\n\t\t\tBlock: splintrp\n\t\t\tBlock: ludcmp\n\t\t\tBlock: lubksb\n\t\t\tBlock: sgeir\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:r1mach\nvars2fortran: No typespec for argument "i".\n\t\t\tBlock: r1mach\n\t\t\tBlock: sasum\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:scopy\nvars2fortran: No typespec for argument "n".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:scopy\nvars2fortran: No typespec for argument "incx".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:scopy\nvars2fortran: No typespec for argument "incy".\n\t\t\tBlock: scopy\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:sdsdot\nvars2fortran: No typespec for argument "n".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:sdsdot\nvars2fortran: No typespec for argument "incx".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:sdsdot\nvars2fortran: No typespec for argument "incy".\n\t\t\tBlock: sdsdot\n\t\t\tBlock: sgefa\n\t\t\tBlock: isamax\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:saxpy\nvars2fortran: No typespec for argument "n".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:saxpy\nvars2fortran: No typespec for argument "incx".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:saxpy\nvars2fortran: No typespec for argument "incy".\n\t\t\tBlock: saxpy\n\t\t\tBlock: sscal\n\t\t\tBlock: sgesl\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:sdot\nvars2fortran: No typespec for argument "n".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:sdot\nvars2fortran: No typespec for argument "incx".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:sdot\nvars2fortran: No typespec for argument "incy".\n\t\t\tBlock: sdot\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xermsg\nvars2fortran: No typespec for argument "nerr".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xermsg\nvars2fortran: No typespec for argument "level".\n\t\t\tBlock: xermsg\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:j4save\nvars2fortran: No typespec for argument "iwhich".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:j4save\nvars2fortran: No typespec for argument "ivalue".\n\t\t\tBlock: j4save\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xercnt\nvars2fortran: No typespec for argument "nerr".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xercnt\nvars2fortran: No typespec for argument "level".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xercnt\nvars2fortran: No typespec for argument "kontrl".\n\t\t\tBlock: xercnt\n\t\t\tBlock: xerhlt\n\t\t\tBlock: xerprn\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:i1mach\nvars2fortran: No typespec for argument "i".\n\t\t\tBlock: i1mach\n{\'attrspec\': [\'dimension(5)\']}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xgetua\nvars2fortran: No typespec for argument "iunita".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xgetua\nvars2fortran: No typespec for argument "n".\n\t\t\tBlock: xgetua\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xersve\nvars2fortran: No typespec for argument "kflag".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xersve\nvars2fortran: No typespec for argument "nerr".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xersve\nvars2fortran: No typespec for argument "level".\n{}\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:xersve\nvars2fortran: No typespec for argument "icount".\n\t\t\tBlock: xersve\n\t\t\tBlock: fdump\n\t\t\tBlock: matrix\n\t\t\tBlock: escprob\n\t\t\tBlock: getinputs\n\t\t\tBlock: defaults\n\t\t\tBlock: length\n\t\t\tBlock: output\nIn: :radex:/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f:output\n\tgetarrlen:variable "micron" undefined\n\t\t\tBlock: readdata\nPost-processing (stage 2)...\nBuilding modules...\n\tBuilding module "radex"...\n\t\tConstructing wrapper function "backrad"...\n\t\t  backrad()\n\t\tConstructing wrapper function "galbr"...\n\t\t  galbr()\n\t\tConstructing wrapper function "splcoeff"...\n\t\t  splcoeff(x,f,n,fp1,fpn,fpp)\n\t\tConstructing wrapper function "splintrp"...\n\t\t  splintrp(xin,fin,fppin,x,fout,[n])\n\t\tConstructing wrapper function "ludcmp"...\n\t\t  ludcmp(a,indx,d,[n,np])\n\t\tConstructing wrapper function "lubksb"...\n\t\t  lubksb(a,n,indx,b,[np])\n\t\tConstructing wrapper function "sgeir"...\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\n\t\t  sgeir(a,v,itask,ind,work,iwork,[lda,n])\n\t\tCreating wrapper for Fortran function "r1mach"("r1mach")...\n\t\tConstructing wrapper function "r1mach"...\n\t\t  r1mach = r1mach(i)\n\t\tCreating wrapper for Fortran function "sasum"("sasum")...\n\t\tConstructing wrapper function "sasum"...\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\n\t\t  sasum = sasum(n,sx,incx)\n\t\tConstructing wrapper function "scopy"...\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\n\t\t  scopy(n,sx,incx,sy,incy)\n\t\tCreating wrapper for Fortran function "sdsdot"("sdsdot")...\n\t\tConstructing wrapper function "sdsdot"...\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\n\t\t  sdsdot = sdsdot(n,sb,sx,incx,sy,incy)\n\t\tConstructing wrapper function "sgefa"...\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\n\t\t  sgefa(a,n,ipvt,info,[lda])\n\t\tCreating wrapper for Fortran function "isamax"("isamax")...\n\t\tConstructing wrapper function "isamax"...\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\n\t\t  isamax = isamax(n,sx,incx)\n\t\tConstructing wrapper function "saxpy"...\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\n\t\t  saxpy(n,sa,sx,incx,sy,incy)\n\t\tConstructing wrapper function "sscal"...\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\n\t\t  sscal(n,sa,sx,incx)\n\t\tConstructing wrapper function "sgesl"...\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\n\t\t  sgesl(a,n,ipvt,b,job,[lda])\n\t\tCreating wrapper for Fortran function "sdot"("sdot")...\n\t\tConstructing wrapper function "sdot"...\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\ngetarrdims:warning: assumed shape array, using 0 instead of \'*\'\n\t\t  sdot = sdot(n,sx,incx,sy,incy)\n\t\tConstructing wrapper function "xermsg"...\n\t\t  xermsg(librar,subrou,messg,nerr,level)\n\t\tCreating wrapper for Fortran function "j4save"("j4save")...\n\t\tConstructing wrapper function "j4save"...\n\t\t  j4save = j4save(iwhich,ivalue,iset)\n\t\tConstructing wrapper function "xercnt"...\n\t\t  xercnt(librar,subrou,messg,nerr,level,kontrl)\n\t\tConstructing wrapper function "xerhlt"...\n\t\t  xerhlt(messg)\n\t\tConstructing wrapper function "xerprn"...\n\t\t  xerprn(prefix,npref,messg,nwrap)\n\t\tCreating wrapper for Fortran function "i1mach"("i1mach")...\n\t\tConstructing wrapper function "i1mach"...\n\t\t  i1mach = i1mach(i)\n\t\tConstructing wrapper function "xgetua"...\n\t\t  xgetua(iunita,n)\n\t\tConstructing wrapper function "xersve"...\n\t\t  xersve(librar,subrou,messg,kflag,nerr,level,icount)\n\t\tConstructing wrapper function "fdump"...\n\t\t  fdump()\n\t\tConstructing wrapper function "matrix"...\n\t\t  matrix(niter,conv)\n\t\tCreating wrapper for Fortran function "escprob"("escprob")...\n\t\tConstructing wrapper function "escprob"...\n\t\t  escprob = escprob(tau)\n\t\tConstructing wrapper function "getinputs"...\n\t\t  getinputs()\n\t\tConstructing wrapper function "defaults"...\n\t\t  defaults()\n\t\tCreating wrapper for Fortran function "length"("length")...\n\t\tConstructing wrapper function "length"...\n\t\t  length = length(str)\n\t\tConstructing wrapper function "output"...\n\t\t  output(niter)\n\t\tConstructing wrapper function "readdata"...\n\t\t  readdata()\n\t\tConstructing COMMON block support for "impex"...\n\t\t  outfile,molfile,specref\n\t\tConstructing COMMON block support for "setup"...\n\t\t  radat,method,version,logfile\n\t\tConstructing COMMON block support for "imolec"...\n\t\t  nlev,nline,ncoll,npart,ntemp,iupp,ilow\n\t\tConstructing COMMON block support for "rmolec"...\n\t\t  amass,eterm,gstat,aeinst,eup\n\t\tConstructing COMMON block support for "cphys"...\n\t\t  density,tkin,tbg,cdmol,deltav,totdens\n\t\tConstructing COMMON block support for "freq"...\n\t\t  fmin,fmax\n\t\tConstructing COMMON block support for "radi"...\n\t\t  xnu,taul,tex,backi,totalb,spfreq,trj\n\t\tConstructing COMMON block support for "quant"...\n\t\t  qnum\n\t\tConstructing COMMON block support for "collie"...\n\t\t  crate,ctot,xpop\n\t\tConstructing COMMON block support for "dbg"...\n\t\t  debug\n\tWrote C/API module "radex" to file "/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/radexmodule.c"\n\tFortran 77 wrappers are saved to "/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/radex-f2pywrappers.f"\n  adding \'/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/fortranobject.c\' to sources.\n  adding \'/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7\' to include_dirs.\ncopying /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/f2py/src/fortranobject.c -> /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7\ncopying /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/f2py/src/fortranobject.h -> /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7\n  adding \'/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/radex-f2pywrappers.f\' to sources.\nbuild_src: building npy-pkg config files\nrunning build_ext\ncustomize UnixCCompiler\ncustomize UnixCCompiler using build_ext\ncustomize Gnu95FCompiler\nFound executable /Users/adam/miniconda3/bin/gfortran\ncustomize Gnu95FCompiler using build_ext\nbuilding \'radex\' extension\ncompiling C sources\nC compiler: gcc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I/Users/adam/miniconda3/include -arch x86_64 -I/Users/adam/miniconda3/include -arch x86_64\n\ncreating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var\ncreating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var/folders\ncreating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var/folders/_r\ncreating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr\ncreating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T\ncreating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy\ncreating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7\ncompile options: \'-I/Users/adam/repos/pyradex/Radex/src -I/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7 -I/Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include -I/Users/adam/miniconda3/include/python3.7m -c\'\ngcc: /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/radexmodule.c\ngcc: /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/fortranobject.c\ncompiling Fortran sources\nFortran f77 compiler: /Users/adam/miniconda3/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -m64 -fPIC -O3 -funroll-loops\nFortran f90 compiler: /Users/adam/miniconda3/bin/gfortran -Wall -g -fno-second-underscore -m64 -fPIC -O3 -funroll-loops\nFortran fix compiler: /Users/adam/miniconda3/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -Wall -g -fno-second-underscore -m64 -fPIC -O3 -funroll-loops\ncompile options: \'-I/Users/adam/repos/pyradex/Radex/src -I/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7 -I/Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include -I/Users/adam/miniconda3/include/python3.7m -c\'\ngfortran:f77: /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.f\ngfortran:f77: /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/radex-f2pywrappers.f\n/Users/adam/miniconda3/bin/gfortran -Wall -g -m64 -Wall -g -undefined dynamic_lookup -bundle /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/radexmodule.o /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/fortranobject.o /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpr23pkj84.o /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy/src.macosx-10.7-x86_64-3.7/radex-f2pywrappers.o -L/Users/adam/miniconda3/bin/../lib/gcc/x86_64-apple-darwin11.4.2/4.8.5 -L/Users/adam/miniconda3/bin/../lib/gcc/x86_64-apple-darwin11.4.2/4.8.5/../../.. -L/Users/adam/miniconda3/bin/../lib/gcc/x86_64-apple-darwin11.4.2/4.8.5/../../.. -lgfortran -o ./radex.cpython-37m-darwin.so\nRemoving build directory /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpsu_szjgy\n'
running install_myradex
rm ./*.mod ./*.o
rm: ./*.mod: No such file or directory
rm: ./*.o: No such file or directory
make: *** [clean] Error 1
gfortran -O3 -fPIC -c sub_global_variables.f90
gfortran -O3 -fPIC -c sub_trivials.f90
gfortran -O3 -fPIC -c nleq1.f
gfortran -O3 -fPIC -c linalg_nleq1.f
linalg_nleq1.f:1513.21:

         CALL XERBLA('DGER ',INFO)
                     1
Warning: Character length of actual argument shorter than of dummy argument 'srname' (5/6) at (1)
gfortran -O3 -fPIC -c statistic_equilibrium.f90
gfortran -O3 -fPIC -c my_radex.f90
gfortran -O3 -fPIC -c opkda1.f
opkda1.f:1255.43:

     1   RWORK(LACOR), IA, JA, RWORK(LWM), RWORK(LWM), IPFLAG, F, JAC)
                                           1
Warning: Type mismatch in argument 'iwk' at (1); passed REAL(8) to INTEGER(4)
opkda1.f:9498.51:

     1   RWORK(LACOR), IA, JA, IC, JC, RWORK(LWM), RWORK(LWM), IPFLAG,
                                                   1
Warning: Type mismatch in argument 'iwk' at (1); passed REAL(8) to INTEGER(4)
gfortran -O3 -fPIC -c opkda2.f
opkda2.f:938.72:

   10 ASSIGN 30 TO NEXT
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
opkda2.f:945.19:

   20    GO TO NEXT,(30, 50, 70, 110)
                   1
Warning: Deleted feature: Assigned GOTO statement at (1)
opkda2.f:947.72:

      ASSIGN 50 TO NEXT
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
opkda2.f:957.72:

      ASSIGN 70 TO NEXT
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
opkda2.f:963.72:

      ASSIGN 110 TO NEXT
                                                                        1
Warning: Deleted feature: ASSIGN statement at (1)
gfortran -O3 -fPIC -c opkdmain.f
gfortran -O3 -fPIC -c wnorm.f
gfortran -O3 -fPIC -c zibconst.f
gfortran -O3 -fPIC -c zibmon.f
gfortran -O3 -fPIC -c zibsec.f
f2py -c -m wrapper_my_radex wrapper_for_python.f90 -L my_radex.o opkda1.o opkda2.o opkdmain.o statistic_equilibrium.o sub_global_variables.o sub_trivials.o nleq1.o linalg_nleq1.o wnorm.o zibconst.o zibmon.o zibsec.o
running build
running config_cc
unifing config_cc, config, build_clib, build_ext, build commands --compiler options
running config_fc
unifing config_fc, config, build_clib, build_ext, build commands --fcompiler options
running build_src
build_src
building extension "wrapper_my_radex" sources
f2py options: []
f2py:> /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/wrapper_my_radexmodule.c
creating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7
Reading fortran codes...
        Reading file 'wrapper_for_python.f90' (format:free)
crackline: groupcounter=1 groupname={0: '', 1: 'module', 2: 'interface', 3: 'module', 4: 'subroutine'}
crackline: Mismatch of blocks encountered. Trying to fix it by assuming "end" statement.
Post-processing...
        Block: wrapper_my_radex
                        Block: myradex_wrapper
                                Block: config_basic
In: :wrapper_my_radex:wrapper_for_python.f90:myradex_wrapper:config_basic
get_useparameters: no module my_radex info used by config_basic
                                Block: run_one_params
In: :wrapper_my_radex:wrapper_for_python.f90:myradex_wrapper:run_one_params
get_useparameters: no module my_radex info used by run_one_params
In: :wrapper_my_radex:wrapper_for_python.f90:myradex_wrapper:run_one_params
get_useparameters: no module statistic_equilibrium info used by run_one_params
Post-processing (stage 2)...
        Block: wrapper_my_radex
                Block: unknown_interface
                        Block: myradex_wrapper
                                Block: config_basic
                                Block: run_one_params
Building modules...
        Building module "wrapper_my_radex"...
                Constructing F90 module support for "myradex_wrapper"...
                  Variables: flag_good n_item_column about column_names molecule_name
                        Constructing wrapper function "myradex_wrapper.config_basic"...
                          n_levels,n_item,n_transitions = config_basic(dir_transition_rates,filename_molecule,tbg,verbose)
                        Constructing wrapper function "myradex_wrapper.run_one_params"...
                          energies,f_occupations,data_transitions,cooling_rate = run_one_params(tkin,dv_cgs,dens_x_cgs,ncol_x_cgs,h2_density_cgs,hi_density_cgs,oh2_density_cgs,ph2_density_cgs,hii_density_cgs,electron_density_cgs,n_levels,n_item,n_transitions,geotype)
        Wrote C/API module "wrapper_my_radex" to file "/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/wrapper_my_radexmodule.c"
        Fortran 90 wrappers are saved to "/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/wrapper_my_radex-f2pywrappers2.f90"
  adding '/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/fortranobject.c' to sources.
  adding '/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7' to include_dirs.
copying /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/f2py/src/fortranobject.c -> /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7
copying /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/f2py/src/fortranobject.h -> /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7
  adding '/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/wrapper_my_radex-f2pywrappers2.f90' to sources.
build_src: building npy-pkg config files
running build_ext
customize UnixCCompiler
customize UnixCCompiler using build_ext
get_default_fcompiler: matching types: '['gnu95', 'nag', 'absoft', 'ibm', 'intel', 'gnu', 'g95', 'pg']'
customize Gnu95FCompiler
Found executable /Users/adam/miniconda3/bin/gfortran
customize Gnu95FCompiler
customize Gnu95FCompiler using build_ext
building 'wrapper_my_radex' extension
compiling C sources
C compiler: gcc -Wno-unused-result -Wsign-compare -Wunreachable-code -DNDEBUG -g -fwrapv -O3 -Wall -Wstrict-prototypes -I/Users/adam/miniconda3/include -arch x86_64 -I/Users/adam/miniconda3/include -arch x86_64

creating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/var
creating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/var/folders
creating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/var/folders/_r
creating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr
creating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T
creating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5
creating /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7
compile options: '-I/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7 -I/Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include -I/Users/adam/miniconda3/include/python3.7m -c'
gcc: /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/wrapper_my_radexmodule.c
gcc: /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/fortranobject.c
In file included from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1824:0,
                 from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/fortranobject.h:13,
                 from /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/wrapper_my_radexmodule.c:16:
/Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 #warning "Using deprecated NumPy API, disable it with " \
  ^
In file included from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarraytypes.h:1824:0,
                 from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/ndarrayobject.h:12,
                 from /Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/arrayobject.h:4,
                 from /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/fortranobject.h:13,
                 from /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/fortranobject.c:2:
/Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include/numpy/npy_1_7_deprecated_api.h:17:2: warning: #warning "Using deprecated NumPy API, disable it with " "#define NPY_NO_DEPRECATED_API NPY_1_7_API_VERSION" [-Wcpp]
 #warning "Using deprecated NumPy API, disable it with " \
  ^
/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/wrapper_my_radexmodule.c:134:12: warning: ‘f2py_size’ defined but not used [-Wunused-function]
 static int f2py_size(PyArrayObject* var, ...)
            ^
compiling Fortran 90 module sources
Fortran f77 compiler: /Users/adam/miniconda3/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -m64 -fPIC -O3 -funroll-loops
Fortran f90 compiler: /Users/adam/miniconda3/bin/gfortran -Wall -g -fno-second-underscore -m64 -fPIC -O3 -funroll-loops
Fortran fix compiler: /Users/adam/miniconda3/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -Wall -g -fno-second-underscore -m64 -fPIC -O3 -funroll-loops
compile options: '-I/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7 -I/Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include -I/Users/adam/miniconda3/include/python3.7m -c'
extra options: '-J/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/ -I/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/'
gfortran:f90: wrapper_for_python.f90
compiling Fortran sources
Fortran f77 compiler: /Users/adam/miniconda3/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -m64 -fPIC -O3 -funroll-loops
Fortran f90 compiler: /Users/adam/miniconda3/bin/gfortran -Wall -g -fno-second-underscore -m64 -fPIC -O3 -funroll-loops
Fortran fix compiler: /Users/adam/miniconda3/bin/gfortran -Wall -g -ffixed-form -fno-second-underscore -Wall -g -fno-second-underscore -m64 -fPIC -O3 -funroll-loops
compile options: '-I/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7 -I/Users/adam/miniconda3/lib/python3.7/site-packages/numpy/core/include -I/Users/adam/miniconda3/include/python3.7m -c'
extra options: '-J/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/ -I/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/'
gfortran:f90: /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/wrapper_my_radex-f2pywrappers2.f90
/Users/adam/miniconda3/bin/gfortran -Wall -g -m64 -Wall -g -undefined dynamic_lookup -bundle /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/wrapper_my_radexmodule.o /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/fortranobject.o /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/wrapper_for_python.o /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5/src.macosx-10.7-x86_64-3.7/wrapper_my_radex-f2pywrappers2.o my_radex.o opkda1.o opkda2.o opkdmain.o statistic_equilibrium.o sub_global_variables.o sub_trivials.o nleq1.o linalg_nleq1.o wnorm.o zibconst.o zibmon.o zibsec.o -L -L/Users/adam/miniconda3/bin/../lib/gcc/x86_64-apple-darwin11.4.2/4.8.5 -L/Users/adam/miniconda3/bin/../lib/gcc/x86_64-apple-darwin11.4.2/4.8.5/../../.. -L/Users/adam/miniconda3/bin/../lib/gcc/x86_64-apple-darwin11.4.2/4.8.5/../../.. -lgfortran -o ./wrapper_my_radex.cpython-37m-darwin.so
ld: warning: directory not found for option '-L-L/Users/adam/miniconda3/bin/../lib/gcc/x86_64-apple-darwin11.4.2/4.8.5'
Removing build directory /var/folders/_r/c4nkvmpn4vx6qc91qygz8h740000gr/T/tmpx9mdqkx5
make: `sub_trivials.o' is up to date.
rm ./*.mod ./*.o
running build
running build_py
creating build
creating build/lib
creating build/lib/pyradex
copying pyradex/version.py -> build/lib/pyradex
copying pyradex/base_class.py -> build/lib/pyradex
copying pyradex/__init__.py -> build/lib/pyradex
copying pyradex/core.py -> build/lib/pyradex
copying pyradex/read_radex.py -> build/lib/pyradex
copying pyradex/utils.py -> build/lib/pyradex
copying pyradex/grid_wrapper.py -> build/lib/pyradex
copying pyradex/despotic_interface.py -> build/lib/pyradex
copying pyradex/synthspec.py -> build/lib/pyradex
creating build/lib/pyradex/radex
copying pyradex/radex/__init__.py -> build/lib/pyradex/radex
creating build/lib/pyradex/tests
copying pyradex/tests/test_fjdu.py -> build/lib/pyradex/tests
copying pyradex/tests/test_grid.py -> build/lib/pyradex/tests
copying pyradex/tests/__init__.py -> build/lib/pyradex/tests
copying pyradex/tests/test_synthspec.py -> build/lib/pyradex/tests
copying pyradex/tests/test_radex.py -> build/lib/pyradex/tests
copying pyradex/tests/test_radex_myradex_consistency.py -> build/lib/pyradex/tests
copying pyradex/tests/test_radex_install.py -> build/lib/pyradex/tests
copying pyradex/tests/setup_package_data.py -> build/lib/pyradex/tests
creating build/lib/pyradex/fjdu
copying pyradex/fjdu/__init__.py -> build/lib/pyradex/fjdu
copying pyradex/fjdu/core.py -> build/lib/pyradex/fjdu
copying pyradex/radex/radex.so -> build/lib/pyradex/radex
creating build/lib/pyradex/tests/data
copying pyradex/tests/data/example.out -> build/lib/pyradex/tests/data
warning: build_py: byte-compiling is disabled, skipping.

running install
running install_lib
copying build/lib/pyradex/radex/radex.so -> /Users/adam/miniconda3/lib/python3.7/site-packages/pyradex/radex
warning: install_lib: byte-compiling is disabled, skipping.

running install_egg_info
Removing /Users/adam/miniconda3/lib/python3.7/site-packages/pyradex-0.4.2dev-py3.7.egg-info
Writing /Users/adam/miniconda3/lib/python3.7/site-packages/pyradex-0.4.2dev-py3.7.egg-info