Javalanche-0.4 Error - Issue #5

gistfile1.txt

getMutationScores:
     [exec] /home/jalbert/workspace1/jgap_3.6.1_full/runMutations.sh /home/jalbert/workspace1/jgap_3.6.1_full/mutation-files/mutation-task-ogrep: mutation-files/output-runMutation-1.txt: No such file or directory
     [exec] rg_jgap-01.txt 1 ""
     [exec] Task 1 not completed - starting again
     [exec] Buildfile: /home/jalbert/workspace1/jgap_3.6.1_full/javalanche.xml
     [exec] 
     [exec] runMutations:
     [exec] 
     [exec] javalancheTask:
     [exec]     [junit] Run mutation testing (without impact detection)
     [exec]     [junit] org.objectweb.asm.tree.analysis.AnalyzerException: Error at instruction 23: Insufficient maximum stack size.
     [exec]     [junit] 	at org.objectweb.asm.tree.analysis.Analyzer.analyze(Analyzer.java:296)
     [exec]     [junit] 	at org.objectweb.asm.util.CheckMethodAdapter$1.visitEnd(CheckMethodAdapter.java:373)
     [exec]     [junit] 	at org.objectweb.asm.util.CheckMethodAdapter.visitEnd(CheckMethodAdapter.java:740)
     [exec]     [junit] 	at org.objectweb.asm.tree.MethodNode.accept(MethodNode.java:489)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.bytecodeMutations.removeSystemExit.RemoveSystemExitMethodNode.visitEnd(RemoveSystemExitMethodNode.java:102)
     [exec]     [junit] 	at org.objectweb.asm.ClassReader.accept(ClassReader.java:1490)
     [exec]     [junit] 	at org.objectweb.asm.ClassReader.accept(ClassReader.java:425)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.bytecodeMutations.BytecodeTransformer.transformBytecode(BytecodeTransformer.java:81)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.bytecodeMutations.BytecodeTransformer.transformBytecode(BytecodeTransformer.java:66)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.bytecodeMutations.BytecodeTransformer.transformBytecode(BytecodeTransformer.java:55)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.javaagent.classFileTransfomer.MutationFileTransformer.transform(MutationFileTransformer.java:92)
     [exec]     [junit] 	at sun.instrument.TransformerManager.transform(TransformerManager.java:188)
     [exec]     [junit] 	at sun.instrument.InstrumentationImpl.transform(InstrumentationImpl.java:385)
     [exec]     [junit] 	at java.lang.ClassLoader.defineClass1(Native Method)
     [exec]     [junit] 	at java.lang.ClassLoader.defineClass(ClassLoader.java:634)
     [exec]     [junit] 	at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
     [exec]     [junit] 	at java.net.URLClassLoader.defineClass(URLClassLoader.java:277)
     [exec]     [junit] 	at java.net.URLClassLoader.access$000(URLClassLoader.java:73)
     [exec]     [junit] 	at java.net.URLClassLoader$1.run(URLClassLoader.java:212)
     [exec]     [junit] 	at java.security.AccessController.doPrivileged(Native Method)
     [exec]     [junit] 	at java.net.URLClassLoader.findClass(URLClassLoader.java:205)
     [exec]     [junit] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:321)
     [exec]     [junit] 	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:294)
     [exec]     [junit] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:266)
     [exec]     [junit] 	at org.jgap.gp.impl.GPGenotypeTest.testConstruct_1(Unknown Source)
     [exec]     [junit] 	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
     [exec]     [junit] 	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
     [exec]     [junit] 	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
     [exec]     [junit] 	at java.lang.reflect.Method.invoke(Method.java:616)
     [exec]     [junit] 	at junit.framework.TestCase.runTest(TestCase.java:168)
     [exec]     [junit] 	at junit.framework.TestCase.runBare(TestCase.java:134)
     [exec]     [junit] 	at junit.framework.TestResult$1.protect(TestResult.java:110)
     [exec]     [junit] 	at junit.framework.TestResult.runProtected(TestResult.java:128)
     [exec]     [junit] 	at junit.framework.TestResult.run(TestResult.java:113)
     [exec]     [junit] 	at junit.framework.TestCase.run(TestCase.java:124)
     [exec]     [junit] 	at junit.framework.TestSuite.runTest(TestSuite.java:243)
     [exec]     [junit] 	at junit.framework.TestSuite.run(TestSuite.java:238)
     [exec]     [junit] 	at org.junit.internal.runners.JUnit38ClassRunner.run(JUnit38ClassRunner.java:101)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.runtime.testDriver.junit.Junit4MutationTestDriver.runTest(Junit4MutationTestDriver.java:231)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.runtime.testDriver.junit.Junit4MutationTestDriver.access$400(Junit4MutationTestDriver.java:59)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.runtime.testDriver.junit.Junit4MutationTestDriver$1.run(Junit4MutationTestDriver.java:330)
     [exec]     [junit] 	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
     [exec]     [junit] 	at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334)
     [exec]     [junit] 	at java.util.concurrent.FutureTask.run(FutureTask.java:166)
     [exec]     [junit] 	at java.lang.Thread.run(Thread.java:679)
     [exec]     [junit] Caused by: java.lang.IndexOutOfBoundsException: Insufficient maximum stack size.
     [exec]     [junit] 	at org.objectweb.asm.tree.analysis.Frame.push(Frame.java:207)
     [exec]     [junit] 	at org.objectweb.asm.tree.analysis.Frame.execute(Frame.java:312)
     [exec]     [junit] 	at org.objectweb.asm.tree.analysis.Analyzer.analyze(Analyzer.java:194)
     [exec]     [junit] 	... 44 more
     [exec]     [junit]      1 FATAL [transform - de.unisb.cs.st.javalanche.mutation.javaagent.classFileTransfomer.MutationFileTransformer] -  Transformation of class org/jgap/gp/impl/GPGenotype failed
     [exec]     [junit]   java.lang.RuntimeException: Error at instruction 23: Insufficient maximum stack size. run()V
     [exec]     [junit] 00000 R .  :  :    L0
     [exec]     [junit] 00001 R .  :  :    FRAME FULL [org/jgap/gp/impl/GPGenotype] []
     [exec]     [junit] 00002 ?    :    FRAME FULL [org/jgap/gp/impl/GPGenotype] []
     [exec]     [junit] 00003 ?    :     INVOKESTATIC java/lang/Thread.currentThread ()Ljava/lang/Thread;
     [exec]     [junit] 00004 ?    :     POP
     [exec]     [junit] 00005 ?    :     INVOKESTATIC java/lang/Thread.interrupted ()Z
     [exec]     [junit] 00006 ?    :     IFNE L1
     [exec]     [junit] 00007 ?    :     ALOAD 0
     [exec]     [junit] 00008 ?    :     INVOKEVIRTUAL org/jgap/gp/impl/GPGenotype.evolve ()V
     [exec]     [junit] 00009 ?    :     ALOAD 0
     [exec]     [junit] 00010 ?    :     INVOKEVIRTUAL org/jgap/gp/impl/GPGenotype.calcFitness ()V
     [exec]     [junit] 00011 ?    :     INVOKESTATIC java/lang/System.gc ()V
     [exec]     [junit] 00012 ?    :     GOTO L0
     [exec]     [junit] 00013 ?    :    L1
     [exec]     [junit] 00014 ?    :    FRAME FULL [org/jgap/gp/impl/GPGenotype] []
     [exec]     [junit] 00015 ?    :     GOTO L2
     [exec]     [junit] 00016 R .  : R  :    L3
     [exec]     [junit] 00017 R .  : R  :    FRAME FULL [org/jgap/gp/impl/GPGenotype] [java/lang/Exception]
     [exec]     [junit] 00018 R .  : R  :     ASTORE 1
     [exec]     [junit] 00019 R R  :  :     ALOAD 1
     [exec]     [junit] 00020 R R  : R  :     INVOKEVIRTUAL java/lang/Exception.printStackTrace ()V
     [exec]     [junit] 00021 R R  :  :    L4
     [exec]     [junit] 00022 R R  :  :     NEW java/lang/RuntimeException
     [exec]     [junit] 00023 R R  : R  :     DUP
     [exec]     [junit] 00024 ?    :     LDC "Replaced System.exit()"
     [exec]     [junit] 00025 ?    :     INVOKESPECIAL java/lang/RuntimeException.<init> (Ljava/lang/String;)V
     [exec]     [junit] 00026 ?    :     ATHROW
     [exec]     [junit] 00027 ?    :    L5
     [exec]     [junit] 00028 ?    :    L2
     [exec]     [junit] 00029 ?    :    FRAME FULL [org/jgap/gp/impl/GPGenotype] []
     [exec]     [junit] 00030 ?    :     RETURN
     [exec]     [junit]      TRYCATCHBLOCK L0 L1 L3 java/lang/Exception
     [exec]     [junit] 
     [exec]     [junit] 
     [exec]     [junit] 	at org.objectweb.asm.util.CheckMethodAdapter$1.visitEnd(CheckMethodAdapter.java:385)
     [exec]     [junit] 	at org.objectweb.asm.util.CheckMethodAdapter.visitEnd(CheckMethodAdapter.java:740)
     [exec]     [junit] 	at org.objectweb.asm.tree.MethodNode.accept(MethodNode.java:489)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.bytecodeMutations.removeSystemExit.RemoveSystemExitMethodNode.visitEnd(RemoveSystemExitMethodNode.java:102)
     [exec]     [junit] 	at org.objectweb.asm.ClassReader.accept(ClassReader.java:1490)
     [exec]     [junit] 	at org.objectweb.asm.ClassReader.accept(ClassReader.java:425)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.bytecodeMutations.BytecodeTransformer.transformBytecode(BytecodeTransformer.java:81)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.bytecodeMutations.BytecodeTransformer.transformBytecode(BytecodeTransformer.java:66)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.bytecodeMutations.BytecodeTransformer.transformBytecode(BytecodeTransformer.java:55)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.javaagent.classFileTransfomer.MutationFileTransformer.transform(MutationFileTransformer.java:92)
     [exec]     [junit] 	at sun.instrument.TransformerManager.transform(TransformerManager.java:188)
     [exec]     [junit] 	at sun.instrument.InstrumentationImpl.transform(InstrumentationImpl.java:385)
     [exec]     [junit] 	at java.lang.ClassLoader.defineClass1(Native Method)
     [exec]     [junit] 	at java.lang.ClassLoader.defineClass(ClassLoader.java:634)
     [exec]     [junit] 	at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
     [exec]     [junit] 	at java.net.URLClassLoader.defineClass(URLClassLoader.java:277)
     [exec]     [junit] 	at java.net.URLClassLoader.access$000(URLClassLoader.java:73)
     [exec]     [junit] 	at java.net.URLClassLoader$1.run(URLClassLoader.java:212)
     [exec]     [junit] 	at java.security.AccessController.doPrivileged(Native Method)
     [exec]     [junit] 	at java.net.URLClassLoader.findClass(URLClassLoader.java:205)
     [exec]     [junit] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:321)
     [exec]     [junit] 	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:294)
     [exec]     [junit] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:266)
     [exec]     [junit] 	at org.jgap.gp.impl.GPGenotypeTest.testConstruct_1(Unknown Source)
     [exec]     [junit] 	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
     [exec]     [junit] 	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
     [exec]     [junit] 	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
     [exec]     [junit] 	at java.lang.reflect.Method.invoke(Method.java:616)
     [exec]     [junit] 	at junit.framework.TestCase.runTest(TestCase.java:168)
     [exec]     [junit] 	at junit.framework.TestCase.runBare(TestCase.java:134)
     [exec]     [junit] 	at junit.framework.TestResult$1.protect(TestResult.java:110)
     [exec]     [junit] 	at junit.framework.TestResult.runProtected(TestResult.java:128)
     [exec]     [junit] 	at junit.framework.TestResult.run(TestResult.java:113)
     [exec]     [junit] 	at junit.framework.TestCase.run(TestCase.java:124)
     [exec]     [junit] 	at junit.framework.TestSuite.runTest(TestSuite.java:243)
     [exec]     [junit] 	at junit.framework.TestSuite.run(TestSuite.java:238)
     [exec]     [junit] 	at org.junit.internal.runners.JUnit38ClassRunner.run(JUnit38ClassRunner.java:101)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.runtime.testDriver.junit.Junit4MutationTestDriver.runTest(Junit4MutationTestDriver.java:231)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.runtime.testDriver.junit.Junit4MutationTestDriver.access$400(Junit4MutationTestDriver.java:59)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.runtime.testDriver.junit.Junit4MutationTestDriver$1.run(Junit4MutationTestDriver.java:330)
     [exec]     [junit] 	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
     [exec]     [junit] 	at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334)
     [exec]     [junit] 	at java.util.concurrent.FutureTask.run(FutureTask.java:166)
     [exec]     [junit] 	at java.lang.Thread.run(Thread.java:679)
     [exec]     [junit]      8 FATAL [transform - de.unisb.cs.st.javalanche.mutation.javaagent.classFileTransfomer.MutationFileTransformer] -  java.lang.RuntimeException: Error at instruction 23: Insufficient maximum stack size. run()V
     [exec]     [junit] 00000 R .  :  :    L0
     [exec]     [junit] 00001 R .  :  :    FRAME FULL [org/jgap/gp/impl/GPGenotype] []
     [exec]     [junit] 00002 ?    :    FRAME FULL [org/jgap/gp/impl/GPGenotype] []
     [exec]     [junit] 00003 ?    :     INVOKESTATIC java/lang/Thread.currentThread ()Ljava/lang/Thread;
     [exec]     [junit] 00004 ?    :     POP
     [exec]     [junit] 00005 ?    :     INVOKESTATIC java/lang/Thread.interrupted ()Z
     [exec]     [junit] 00006 ?    :     IFNE L1
     [exec]     [junit] 00007 ?    :     ALOAD 0
     [exec]     [junit] 00008 ?    :     INVOKEVIRTUAL org/jgap/gp/impl/GPGenotype.evolve ()V
     [exec]     [junit] 00009 ?    :     ALOAD 0
     [exec]     [junit] 00010 ?    :     INVOKEVIRTUAL org/jgap/gp/impl/GPGenotype.calcFitness ()V
     [exec]     [junit] 00011 ?    :     INVOKESTATIC java/lang/System.gc ()V
     [exec]     [junit] 00012 ?    :     GOTO L0
     [exec]     [junit] 00013 ?    :    L1
     [exec]     [junit] 00014 ?    :    FRAME FULL [org/jgap/gp/impl/GPGenotype] []
     [exec]     [junit] 00015 ?    :     GOTO L2
     [exec]     [junit] 00016 R .  : R  :    L3
     [exec]     [junit] 00017 R .  : R  :    FRAME FULL [org/jgap/gp/impl/GPGenotype] [java/lang/Exception]
     [exec]     [junit] 00018 R .  : R  :     ASTORE 1
     [exec]     [junit] 00019 R R  :  :     ALOAD 1
     [exec]     [junit] 00020 R R  : R  :     INVOKEVIRTUAL java/lang/Exception.printStackTrace ()V
     [exec]     [junit] 00021 R R  :  :    L4
     [exec]     [junit] 00022 R R  :  :     NEW java/lang/RuntimeException
     [exec]     [junit] 00023 R R  : R  :     DUP
     [exec]     [junit] 00024 ?    :     LDC "Replaced System.exit()"
     [exec]     [junit] 00025 ?    :     INVOKESPECIAL java/lang/RuntimeException.<init> (Ljava/lang/String;)V
     [exec]     [junit] 00026 ?    :     ATHROW
     [exec]     [junit] 00027 ?    :    L5
     [exec]     [junit] 00028 ?    :    L2
     [exec]     [junit] 00029 ?    :    FRAME FULL [org/jgap/gp/impl/GPGenotype] []
     [exec]     [junit] 00030 ?    :     RETURN
     [exec]     [junit]      TRYCATCHBLOCK L0 L1 L3 java/lang/Exception
     [exec]     [junit] 
     [exec]     [junit] 
     [exec]     [junit] 	at org.objectweb.asm.util.CheckMethodAdapter$1.visitEnd(CheckMethodAdapter.java:385)
     [exec]     [junit] 	at org.objectweb.asm.util.CheckMethodAdapter.visitEnd(CheckMethodAdapter.java:740)
     [exec]     [junit] 	at org.objectweb.asm.tree.MethodNode.accept(MethodNode.java:489)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.bytecodeMutations.removeSystemExit.RemoveSystemExitMethodNode.visitEnd(RemoveSystemExitMethodNode.java:102)
     [exec]     [junit] 	at org.objectweb.asm.ClassReader.accept(ClassReader.java:1490)
     [exec]     [junit] 	at org.objectweb.asm.ClassReader.accept(ClassReader.java:425)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.bytecodeMutations.BytecodeTransformer.transformBytecode(BytecodeTransformer.java:81)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.bytecodeMutations.BytecodeTransformer.transformBytecode(BytecodeTransformer.java:66)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.bytecodeMutations.BytecodeTransformer.transformBytecode(BytecodeTransformer.java:55)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.javaagent.classFileTransfomer.MutationFileTransformer.transform(MutationFileTransformer.java:92)
     [exec]     [junit] 	at sun.instrument.TransformerManager.transform(TransformerManager.java:188)
     [exec]     [junit] 	at sun.instrument.InstrumentationImpl.transform(InstrumentationImpl.java:385)
     [exec]     [junit] 	at java.lang.ClassLoader.defineClass1(Native Method)
     [exec]     [junit] 	at java.lang.ClassLoader.defineClass(ClassLoader.java:634)
     [exec]     [junit] 	at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
     [exec]     [junit] 	at java.net.URLClassLoader.defineClass(URLClassLoader.java:277)
     [exec]     [junit] 	at java.net.URLClassLoader.access$000(URLClassLoader.java:73)
     [exec]     [junit] 	at java.net.URLClassLoader$1.run(URLClassLoader.java:212)
     [exec]     [junit] 	at java.security.AccessController.doPrivileged(Native Method)
     [exec]     [junit] 	at java.net.URLClassLoader.findClass(URLClassLoader.java:205)
     [exec]     [junit] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:321)
     [exec]     [junit] 	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:294)
     [exec]     [junit] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:266)
     [exec]     [junit] 	at org.jgap.gp.impl.GPGenotypeTest.testConstruct_1(Unknown Source)
     [exec]     [junit] 	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
     [exec]     [junit] 	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
     [exec]     [junit] 	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
     [exec]     [junit] 	at java.lang.reflect.Method.invoke(Method.java:616)
     [exec]     [junit] 	at junit.framework.TestCase.runTest(TestCase.java:168)
     [exec]     [junit] 	at junit.framework.TestCase.runBare(TestCase.java:134)
     [exec]     [junit] 	at junit.framework.TestResult$1.protect(TestResult.java:110)
     [exec]     [junit] 	at junit.framework.TestResult.runProtected(TestResult.java:128)
     [exec]     [junit] 	at junit.framework.TestResult.run(TestResult.java:113)
     [exec]     [junit] 	at junit.framework.TestCase.run(TestCase.java:124)
     [exec]     [junit] 	at junit.framework.TestSuite.runTest(TestSuite.java:243)
     [exec]     [junit] 	at junit.framework.TestSuite.run(TestSuite.java:238)
     [exec]     [junit] 	at org.junit.internal.runners.JUnit38ClassRunner.run(JUnit38ClassRunner.java:101)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.runtime.testDriver.junit.Junit4MutationTestDriver.runTest(Junit4MutationTestDriver.java:231)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.runtime.testDriver.junit.Junit4MutationTestDriver.access$400(Junit4MutationTestDriver.java:59)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.runtime.testDriver.junit.Junit4MutationTestDriver$1.run(Junit4MutationTestDriver.java:330)
     [exec]     [junit] 	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
     [exec]     [junit] 	at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334)
     [exec]     [junit] 	at java.util.concurrent.FutureTask.run(FutureTask.java:166)
     [exec]     [junit] 	at java.lang.Thread.run(Thread.java:679)
     [exec]     [junit] 
     [exec]     [junit] java.lang.RuntimeException: Error at instruction 23: Insufficient maximum stack size. run()V
     [exec]     [junit] 00000 R .  :  :    L0
     [exec]     [junit] 00001 R .  :  :    FRAME FULL [org/jgap/gp/impl/GPGenotype] []
     [exec]     [junit] 00002 ?    :    FRAME FULL [org/jgap/gp/impl/GPGenotype] []
     [exec]     [junit] 00003 ?    :     INVOKESTATIC java/lang/Thread.currentThread ()Ljava/lang/Thread;
     [exec]     [junit] 00004 ?    :     POP
     [exec]     [junit] 00005 ?    :     INVOKESTATIC java/lang/Thread.interrupted ()Z
     [exec]     [junit] 00006 ?    :     IFNE L1
     [exec]     [junit] 00007 ?    :     ALOAD 0
     [exec]     [junit] 00008 ?    :     INVOKEVIRTUAL org/jgap/gp/impl/GPGenotype.evolve ()V
     [exec]     [junit] 00009 ?    :     ALOAD 0
     [exec]     [junit] 00010 ?    :     INVOKEVIRTUAL org/jgap/gp/impl/GPGenotype.calcFitness ()V
     [exec]     [junit] 00011 ?    :     INVOKESTATIC java/lang/System.gc ()V
     [exec]     [junit] 00012 ?    :     GOTO L0
     [exec]     [junit] 00013 ?    :    L1
     [exec]     [junit] 00014 ?    :    FRAME FULL [org/jgap/gp/impl/GPGenotype] []
     [exec]     [junit] 00015 ?    :     GOTO L2
     [exec]     [junit] 00016 R .  : R  :    L3
     [exec]     [junit] 00017 R .  : R  :    FRAME FULL [org/jgap/gp/impl/GPGenotype] [java/lang/Exception]
     [exec]     [junit] 00018 R .  : R  :     ASTORE 1
     [exec]     [junit] 00019 R R  :  :     ALOAD 1
     [exec]     [junit] 00020 R R  : R  :     INVOKEVIRTUAL java/lang/Exception.printStackTrace ()V
     [exec]     [junit] 00021 R R  :  :    L4
     [exec]     [junit] 00022 R R  :  :     NEW java/lang/RuntimeException
     [exec]     [junit] 00023 R R  : R  :     DUP
     [exec]     [junit] 00024 ?    :     LDC "Replaced System.exit()"
     [exec]     [junit] 00025 ?    :     INVOKESPECIAL java/lang/RuntimeException.<init> (Ljava/lang/String;)V
     [exec]     [junit] 00026 ?    :     ATHROW
     [exec]     [junit] 00027 ?    :    L5
     [exec]     [junit] 00028 ?    :    L2
     [exec]     [junit] 00029 ?    :    FRAME FULL [org/jgap/gp/impl/GPGenotype] []
     [exec]     [junit] 00030 ?    :     RETURN
     [exec]     [junit]      TRYCATCHBLOCK L0 L1 L3 java/lang/Exception
     [exec]     [junit] 
     [exec]     [junit] 
     [exec]     [junit] 	at org.objectweb.asm.util.CheckMethodAdapter$1.visitEnd(CheckMethodAdapter.java:385)
     [exec]     [junit] 	at org.objectweb.asm.util.CheckMethodAdapter.visitEnd(CheckMethodAdapter.java:740)
     [exec]     [junit] 	at org.objectweb.asm.tree.MethodNode.accept(MethodNode.java:489)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.bytecodeMutations.removeSystemExit.RemoveSystemExitMethodNode.visitEnd(RemoveSystemExitMethodNode.java:102)
     [exec]     [junit] 	at org.objectweb.asm.ClassReader.accept(ClassReader.java:1490)
     [exec]     [junit] 	at org.objectweb.asm.ClassReader.accept(ClassReader.java:425)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.bytecodeMutations.BytecodeTransformer.transformBytecode(BytecodeTransformer.java:81)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.bytecodeMutations.BytecodeTransformer.transformBytecode(BytecodeTransformer.java:66)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.bytecodeMutations.BytecodeTransformer.transformBytecode(BytecodeTransformer.java:55)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.javaagent.classFileTransfomer.MutationFileTransformer.transform(MutationFileTransformer.java:92)
     [exec]     [junit] 	at sun.instrument.TransformerManager.transform(TransformerManager.java:188)
     [exec]     [junit] 	at sun.instrument.InstrumentationImpl.transform(InstrumentationImpl.java:385)
     [exec]     [junit] 	at java.lang.ClassLoader.defineClass1(Native Method)
     [exec]     [junit] 	at java.lang.ClassLoader.defineClass(ClassLoader.java:634)
     [exec]     [junit] 	at java.security.SecureClassLoader.defineClass(SecureClassLoader.java:142)
     [exec]     [junit] 	at java.net.URLClassLoader.defineClass(URLClassLoader.java:277)
     [exec]     [junit] 	at java.net.URLClassLoader.access$000(URLClassLoader.java:73)
     [exec]     [junit] 	at java.net.URLClassLoader$1.run(URLClassLoader.java:212)
     [exec]     [junit] 	at java.security.AccessController.doPrivileged(Native Method)
     [exec]     [junit] 	at java.net.URLClassLoader.findClass(URLClassLoader.java:205)
     [exec]     [junit] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:321)
     [exec]     [junit] 	at sun.misc.Launcher$AppClassLoader.loadClass(Launcher.java:294)
     [exec]     [junit] 	at java.lang.ClassLoader.loadClass(ClassLoader.java:266)
     [exec]     [junit] 	at org.jgap.gp.impl.GPGenotypeTest.testConstruct_1(Unknown Source)
     [exec]     [junit] 	at sun.reflect.NativeMethodAccessorImpl.invoke0(Native Method)
     [exec]     [junit] 	at sun.reflect.NativeMethodAccessorImpl.invoke(NativeMethodAccessorImpl.java:57)
     [exec]     [junit] 	at sun.reflect.DelegatingMethodAccessorImpl.invoke(DelegatingMethodAccessorImpl.java:43)
     [exec]     [junit] 	at java.lang.reflect.Method.invoke(Method.java:616)
     [exec]     [junit] 	at junit.framework.TestCase.runTest(TestCase.java:168)
     [exec]     [junit] 	at junit.framework.TestCase.runBare(TestCase.java:134)
     [exec]     [junit] 	at junit.framework.TestResult$1.protect(TestResult.java:110)
     [exec]     [junit] 	at junit.framework.TestResult.runProtected(TestResult.java:128)
     [exec]     [junit] 	at junit.framework.TestResult.run(TestResult.java:113)
     [exec]     [junit] 	at junit.framework.TestCase.run(TestCase.java:124)
     [exec]     [junit] 	at junit.framework.TestSuite.runTest(TestSuite.java:243)
     [exec]     [junit] 	at junit.framework.TestSuite.run(TestSuite.java:238)
     [exec]     [junit] 	at org.junit.internal.runners.JUnit38ClassRunner.run(JUnit38ClassRunner.java:101)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.runtime.testDriver.junit.Junit4MutationTestDriver.runTest(Junit4MutationTestDriver.java:231)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.runtime.testDriver.junit.Junit4MutationTestDriver.access$400(Junit4MutationTestDriver.java:59)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.runtime.testDriver.junit.Junit4MutationTestDriver$1.run(Junit4MutationTestDriver.java:330)
     [exec]     [junit] 	at java.util.concurrent.Executors$RunnableAdapter.call(Executors.java:471)
     [exec]     [junit] 	at java.util.concurrent.FutureTask$Sync.innerRun(FutureTask.java:334)
     [exec]     [junit] 	at java.util.concurrent.FutureTask.run(FutureTask.java:166)
     [exec]     [junit] 	at java.lang.Thread.run(Thread.java:679)
     [exec]     [junit] Exception in thread "Thread-5" java.lang.IllegalArgumentException: 
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.runtime.ResultReporter.report(ResultReporter.java:65)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.runtime.ResultReporter.mutationEnd(ResultReporter.java:131)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.runtime.testDriver.MutationTestDriver.mutationEnd(MutationTestDriver.java:931)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.runtime.testDriver.MutationTestDriver.unexpectedShutdown(MutationTestDriver.java:870)
     [exec]     [junit] 	at de.unisb.cs.st.javalanche.mutation.runtime.testDriver.MutationDriverShutdownHook.run(MutationDriverShutdownHook.java:49)
     [exec]     [junit] 	at java.lang.Thread.run(Thread.java:679)
     [exec]     [junit]   
     [exec]     [junit] Test de.unisb.cs.st.javalanche.mutation.runtime.testDriver.junit.JavalancheWrapperTestSuite FAILED (crashed)
     [exec] 
     [exec] BUILD SUCCESSFUL
     [exec] Total time: 21 seconds
     [exec] Task 1 not completed - starting again
     [exec] Buildfile: /home/jalbert/workspace1/jgap_3.6.1_full/javalanche.xml
     [exec] 
     [exec] runMutations:
     [exec] 
     [exec] javalancheTask:
     [exec]     [junit] Run mutation testing (without impact detection)
...

Did you ever find a solution for this problem? I'm running into the same thing no matter how much I increase the stack size.