cen_prein.sh

#!/bin/bash
####################################################################################
#
# File   : fed_prein.sh
# Project: SonATA
# Authors: The SonATA code is the result of many programmers
#          over many years
#
# Copyright 2011 The SETI Institute
#
# SonATA is free software: you can redistribute it and/or modify
# it under the terms of the GNU General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
#
# SonATA is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU General Public License for more details.
#
# You should have received a copy of the GNU General Public License
# along with SonATA. If not, see<http://www.gnu.org/licenses/>.
#
# Implementers of this code are requested to include the caption
# "Licensed through SETI" with a link to setiQuest.org.
#
# For alternate licensing arrangements, please contact
# The SETI Institute at www.seti.org or setiquest.org.
#
####################################################################################

CRNT_PWD=`pwd`
cd /tmp
exec > >(tee  ${0##*/}-$(date +"%b-%d-%y").log) ## Log the Script
clear


####################################################################################
#                            Checking for SonATA		                   #
####################################################################################
if [ -f $HOME'/SonATA/LICENSE.txt' ]
then
echo "SonATA successfully found"
else
echo "SonATA not found"
echo "If you want to contribute you should open a github account and use the" 
echo "            standard GitHub fork/pull mechanism"				
sleep 1
echo " For more information visit http://setiquest.org/wiki/index.php/GitHub"
echo "       and http://setiquest.org/content/sonata-download               "
sleep 1
echo "Do you want to continue building by downloading the SonATA without Github fork/pull (y/n)"
   while true; do
   read choice
   case $choice in
      [Nn]* ) echo  "Aborting the build"
	      exit 1;;
      [Yy]* ) echo  "Downloading the SonATA"
              cd $HOME
              git clone git://github.com/setiQuest/SonATA.git
              break;;
          * ) echo "Only y or n accepted";;   
          esac
          done
fi 
sleep 3

####################################################################################
#               Installing the dependencies for SonATA			      #
####################################################################################
echo "Installing the dependencies for SonATA"
echo "Root" && sleep 1 && su -c 'yum install wget sudo'
wget http://packages.sw.be/rpmforge-release/rpmforge-release-0.5.2-2.el5.rf.x86_64.rpm
sudo rpm --import http://apt.sw.be/RPM-GPG-KEY.dag.txt
sudo rpm -K rpmforge-release-0.5.2-2.el5.rf.*.rpm
sudo rpm -i rpmforge-release-0.5.2-2.el5.rf.*.rpm
sudo yum -y --nogpgcheck localinstall sonata-build-meta-1.0.alpha.centos-1.noarch.rpm
sudo yum -y erase autoconf
BUILD_DIR=$CRNT_PWD/build
mkdir $BUILD_DIR
mkdir $BUILD_DIR/downloads
mkdir $BUILD_DIR/installs
mkdir $BUILD_DIR/build

####################################
##Download and install libtool
#####################################
cd $BUILD_DIR/downloads
wget http://ftp.gnu.org/gnu/libtool/libtool-2.2.2.tar.gz
gunzip libtool-2.2.2.tar.gz
tar -xvf libtool-2.2.2.tar
cd libtool-2.2.2
cd $BUILD_DIR/build
$BUILD_DIR/downloads/libtool-2.2.2/configure 
make
sudo make install
rm -rf $BUILD_DIR/build/*
####################################
##Download and install autoconf
#####################################
cd $BUILD_DIR/downloads
wget http://ftp.gnu.org/gnu/autoconf/autoconf-2.63.tar.gz
gunzip autoconf-2.63.tar.gz
tar -xvf autoconf-2.63.tar
cd autoconf-2.63
cd $BUILD_DIR/build
$BUILD_DIR/downloads/autoconf-2.63/configure 
make
sudo make install
rm -rf $BUILD_DIR/build/*
####################################
##Download and install automake
#####################################
cd $BUILD_DIR/downloads
wget http://ftp.gnu.org/gnu/automake/automake-1.10.1.tar.gz
gunzip automake-1.10.1.tar.gz
tar -xvf automake-1.10.1.tar
cd automake-1.10.1
cd $BUILD_DIR/build
$BUILD_DIR/downloads/automake-1.10.1/configure 
make
sudo make install
rm -rf $BUILD_DIR/build/*

####################################
#Download and install GMP 4.3.2
####################################
cd $BUILD_DIR/downloads
wget ftp://ftp.gnu.org/gnu/gmp/gmp-4.3.2.tar.gz
gzip -d gmp-4.3.2.tar.gz
tar -xvf gmp-4.3.2.tar
cd gmp-4.3.2/
./configure --prefix=/usr/local
make
sudo make install
rm -rf $BUILD_DIR/build/*
####################################
#Download and install MPFR-2.4.2.tar.gz
####################################
cd $BUILD_DIR/downloads
wget http://ftp.gnu.org/gnu/mpfr/mpfr-2.4.2.tar.gz
gzip -d mpfr-2.4.2.tar.gz
tar -xvf mpfr-2.4.2.tar
cd mpfr-2.4.2
./configure --prefix=/usr/local
make
sudo make install
rm -rf $BUILD_DIR/build/*
#####################################
##Download and install fftw
#####################################
cd $BUILD_DIR/downloads
wget http://www.fftw.org/fftw-3.2.1.tar.gz
gunzip fftw-3.2.1.tar.gz
tar -xvf fftw-3.2.1.tar
cd fftw-3.2.1
cd $BUILD_DIR/build
$BUILD_DIR/downloads/fftw-3.2.1/configure --prefix=/usr/local --enable-threads --enable-float --enable-sse --disable-fortran
make
make check
sudo make install
rm -rf $BUILD_DIR/build/*
rm -rf $BUILD_DIR/downloads/*
####################################################################################
#               Installing and Configuring the java                                #
####################################################################################
echo "Download the java(y/n)?"
   while true; do
   read choice
   case $choice in
         [Yy]* ) echo "Installing and Configuring the java";
                 cd /tmp
                 wget -O jdk-6u26-linux-x64-rpm.bin http://download.oracle.com/otn-pub/java/jdk/6u26-b03/jdk-6u26-linux-x64-rpm.bin
                 chmod a+x jdk-6u26-linux-x64-rpm.bin
                 sudo su -c ./jdk-6u26-linux-x64-rpm.bin
                 sudo su -c '/usr/sbin/alternatives --install /usr/bin/java java /usr/java/jdk1.6.0_26/jre/bin/java 20000'
                 sudo su -c '/usr/sbin/alternatives --install /usr/bin/javac javac /usr/java/jdk1.6.0_26/bin/javac 20000'
                 sudo su -c '/usr/sbin/alternatives --install /usr/bin/jar jar /usr/java/jdk1.6.0_26/bin/jar 20000'
                 break;;
         [Nn]* ) echo "Ensure that Sun-Java is available during runtime";break;;
         * ) echo "Please answer y or n.";;
   esac
   done
sudo su -c '/usr/sbin/update-alternatives --config javac'
sudo su -c '/usr/sbin/update-alternatives --config java'
sleep 3


####################################################################################
#                Downloading the extra libraries and data       		      #
####################################################################################
echo "Downloading the extra libraries and data"

echo "Getting the ACE"
cd ~/SonATA/
PACKAGES_VERSION=packages_1.0
PACKAGES_DIR=packages
PACKAGES_FILE=$PACKAGES_VERSION.tar.gz
#wget http://setiquest.org/sonata_files/$PACKAGES_FILE
tar zxf $PACKAGES_FILE
rm -fr $PACKAGES_FILE
mv $PACKAGES_VERSION $PACKAGES_DIR
PACKAGES_PATH=`pwd`/$PACKAGES_DIR
cd ~/SonATA/packages
rm ACE_wrappers
wget http://download.dre.vanderbilt.edu/previous_versions/ACE-5.7.8.zip
unzip ACE-5.7.8.zip
cd ACE_wrappers
export ACE_ROOT=$PWD
cd $ACE_ROOT/ace
dos2unix ../bin/add_rel_link.sh
ln -s config-linux.h config.h
cd $ACE_ROOT/include/makeinclude
ln -s platform_linux.GNU platform_macros.GNU
cd $ACE_ROOT/ace
make
ACE_ROOT=$PACKAGES_PATH/ACE_wrappers
sleep 2
if [ -f $HOME'/sonata_install/data/vger-xpol-2010-07-14-406.pktdata' ]
then 
echo "Voyager Data Found"
else
echo "Getting the Voyager data"
mkdir ~/sonata_install
mkdir ~/sonata_install/data
cd ~/sonata_install/data
wget http://setiquest.org/sonata_files/vger-xpol-2010-07-14-406.pktdata.tar.Z
tar -xvzf vger-xpol-2010-07-14-406.pktdata.tar.Z
fi
sleep 3

####################################################################################
#                Preparing the files       		                            #
####################################################################################
echo "Preparing the files"
sed -i 's@ACE_ROOT="$ACE_ROOT"@ACE_ROOT="'$HOME'/SonATA/packages/ACE_wrappers"@g'    ~/SonATA/sse-pkg/configure.ac
sed -i 's@lappend ::auto_path /usr/local/lib@lappend ::auto_path '$HOME'/sonata_install/lib@g' ~/SonATA/scripts/sserc.tcl
echo "Resource the environment using assumption that you are using bash?(y/n)"
   while true; do
   read choice
   case $choice in
      [Nn]* ) echo  "Your shell should have these variable if you are using bash or equvialent other shell"
              echo  '  ACE_ROOT=$HOME/SonATA/packages/ACE_wrappers
                       PACKAGES_PATH=$HOME/SonATA/packages
                       export LD_LIBRARY_PATH=$ACE_ROOT/ace:$ACE_ROOT/lib:$PACKAGES_PATH/lib:$LD_LIBRARY_PATH
                       export PATH=.:$HOME/sonata_install/bin:$PACKAGES_PATH/bin:$PATH\
                       ulimit -s unlimited'
                       break;;
      [Yy]* ) echo  "Resourcing the enviroment by changing .bashrc"
              sed -i '
$ a\
ACE_ROOT=$HOME/SonATA/packages/ACE_wrappers\
PACKAGES_PATH=$HOME/SonATA/packages\
export LD_LIBRARY_PATH=$ACE_ROOT/ace:$ACE_ROOT/lib:$PACKAGES_PATH/lib:$LD_LIBRARY_PATH\
export PATH=.:$HOME/sonata_install/bin:$PACKAGES_PATH/bin:$PATH\
ulimit -s unlimited' ~/.bashrc
                       break;;
          * ) echo "Only y or n are accepted";;   
          esac
          done 

####################################################################################
#                Creating a shortcut to test SonATA              	           #
####################################################################################
cat > ~/Desktop/test_sonata <<EOD
#!/bin/tcsh
cd ~/sonata_install/scripts
source spacecraft-demo-xpol-env-vars.tcsh
ssh-add ~/.ssh/id_rsa 
runsse.sh
EOD
chmod +x  ~/Desktop/test_sonata

####################################################################################
#                Creating a ssh key and configuring it          	           #
####################################################################################
echo "Starting the ssh daemon"
sudo /etc/init.d/sshd start
cd ~/.ssh 2>/dev/null || (mkdir ~/.ssh && chmod 700 ~/.ssh) && cd ~/.ssh
echo "Creating the ssh key"
ssh-keygen -f id_rsa -t rsa -q
ssh-copy-id -i ~/.ssh/id_rsa.pub `whoami`@`hostname`
echo "###########################################################"
echo "#     Type ssh `whoami`@`hostname` and then exit          #"
echo "###########################################################"
sleep 3
echo "This will set the automatic key usage without password"