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Katarina Mladenovic kmladenovic

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kmladenovic / run_rnaseq_from_demux.sh
Last active October 23, 2025 13:25
#!/bin/bash
set -e
set -o pipefail
# --------------------------
# User-set parameters
# --------------------------
# IDs and workspace details or default to 'scidev/testing'
@kmladenovic
kmladenovic / run_rnaseq_from_demux.sh
Created October 22, 2025 15:03
#!/bin/bash
set -e
set -o pipefail
# --------------------------
# User-set parameters
# --------------------------
# IDs and workspace details or default to 'scidev/testing'
@kmladenovic
kmladenovic / sh
Created October 22, 2025 15:02
run_rnaseq_from_demux
#!/bin/bash
set -e
set -o pipefail
# --------------------------
# User-set parameters
# --------------------------
# IDs and workspace details or default to 'scidev/testing'
@kmladenovic
kmladenovic / gist:f48f5a2fcfe60cadd52da268db36914a
Created October 22, 2025 14:37
#!/bin/bash
set -e
set -o pipefail
# --------------------------
# User-set parameters
# --------------------------
# IDs and workspace details or default to 'scidev/testing'
@kmladenovic
kmladenovic / gist:139914ecc0ced4260763cbcb9cec0c19
Created October 22, 2025 14:37
#!/bin/bash
set -e
set -o pipefail
# --------------------------
# User-set parameters
# --------------------------
# IDs and workspace details or default to 'scidev/testing'