Given a sequence run, and an anonymous activity_run, insert the anonymous run into the sequence_run.

replace_run_in_sequence.rb

def replace_run_in_sequence(seq_r_id, new_run_id)
  new_run = Run.find(new_run_id)
  sequence_run = SequenceRun.find(seq_r_id)
  old_run = sequence_run.runs.detect { |r| r.activity_id == new_run.activity_id }
  if old_run
    clone_run(old_run,new_run)
    if new_run.percent_complete > old_run.percent_complete
      puts "removing run #{old_run.id}"
      sequence_run.runs.delete(old_run)
      puts "adding run #{new_run.id}"
      sequence_run.runs << new_run
    else
      puts "something is wrong, the old run has more data than the new one"
    end
  else
    puts "Cant find matching activity run in sequence run"
  end
end

def clone_run(with_endpoint,anonymous)
  anonymous.remote_endpoint = with_endpoint.remote_endpoint
  anonymous.remote_id = with_endpoint.remote_id
  anonymous.collaboration_run_id = with_endpoint.collaboration_run_id
  anonymous.user = with_endpoint.user
  anonymous.sequence_run_id = with_endpoint.sequence_run_id
end