Created
April 23, 2018 22:56
-
-
Save krlsdu/583220539ee8323bbad9b3386b397a7b to your computer and use it in GitHub Desktop.
rosalinda_test_rosalinda_computing_GC_content
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
defmodule GcTest do | |
use ExUnit.Case | |
doctest Gc | |
test "Computing GC Content" do | |
assert Gc.gc_content(">Rosalind_4140 | |
TTTGCCTTATAACGTCTCTGAGGTAATCCTGCGTACGCCCGTTAAACATCGGTACCAAGC | |
TCTGTTGATCGTCGCGCAGTAATCTAGCGTATAGGTGGTCTCGCGTTGCGACATACCAGA | |
TTGGTGGGGTCGGGGCACACACCCCAGGCCATCGAGCACCTTTCTGACATATGCAATGCC | |
GGCACTAGCAGCTCCAATTGCACAGGAACCGGCTGCCTTATATCATCGGATGATGATCTT | |
AGGTCACACTGCTCATTGCTGGGGTATCACAGCGCGCAATCCTAGTGGACCCTACAAAGA | |
TAACACATCGGGGTCCGGAAGTTGTAATTGCACACAACTTTGTTAACAGAAAGCGAGGAG | |
TTTGTTCGGACAGTCCAGGCCTTAAGATGGCCCTTTTGAATTAGCGTTATTTAGAGGGAG | |
ACCTGGCTGAGGGAACGTCAATCTGTAGACTCGGCTTTATAAGCAATGCTCAATAAAGGG | |
CTGAATGTTACACCAGTTTGGACACTGGCCTGATAGATGCTGAAGAGCGAACCCAGAGGG | |
TGCCGGTTAGAACATTCGGGCTATCCGACCGCGTGGTTTACGTACCGGTCCCGGGAATAG | |
GATAATGGACACGCAGCTACACATAGTCATTTGTGGAGCACCGAGCTCTCATCTCGCTTT | |
GGAGCTAATTAGCTGCTTGAACAGCTGTAATAGGCTCGAGGCGTTGTACTAAGAGATATC | |
GGCTAAGGTACGCATAAATTCGAGATCTGGTGCATAGGCTGTCCCGGAGGTAGGTCCGCA | |
ATTGAGGAACGCCGCGCTAAAATTCTGTCTATCCGAATGATTGATCCGTCCTATGCCTCA | |
TTGTTACTTTACGGTTCGGTAAGGCCGCGCCTGGCAATTCGAAAATAATCCTGCTCCCTC | |
TTCCAAGGTCAAGCATTCCGTCAGGCGCCTAAATTACAGCGGACGCCGTCAAATGCTTT | |
>Rosalind_3797 | |
TCTCAAGAGTTTGGTGTACGGAGACCACTTAATGGCTCCCAGAACACGATTTCCTTGATC | |
CTATATATCTCAGCACTATCCGTTGGACGGAGTACCACCCCTTTCTGCCAAATACGGAAA | |
TCAATCCATACAAACATATATATGATACTTCCTGTATTCAGCGATTTCTGGTTTTTCGGG | |
GATCAGAGGCAATTTAGCCCGGAAATGTCAGCCCGTCATCCGCTACAAGGGGCAGTCCTG | |
AGTTTCCTATGTCCTAAGCACTTAGTGCACTAGAGGGAGTTCCGTTATAGAGACCATGCT | |
TATCACATGATGGTTAAAGACCGTGTGGTCAAGGGTGCAAAAGTGTCCCAGTTGAGGCCC | |
CCTGGCCTTTGGCTACACCTGCGTAACCATCAGGTAGTCACGACGCGCGACCGTTCCATC | |
CGTTCCTCCCAATAGTTTTAGCCTTATGTCCATGGATAGCGATTCGTGTGCAACCTGCGT | |
ACAACCAGATCGGGTTACCCCCTATTGCCAGCGATTCCCTTTCATTGCAGCCTATTAGAG | |
TTTATTCCTCTGCCAACGCGGAAGCTTTGACAGTAGCAGGAAGACATAGCATACGAGATA | |
GCCTGGCTGACAAAACGGCTTCATTCCACCGTGGTGAATCTTCGCACACGAGTATTCGAT | |
AGACGGCCTTTGCTTGTGAGTACCAACCAAAGGTGTTTCCACATTTGGAAAATTTTCAAC | |
GACATGGAGAAACACAGGATGGTCCTCGTACATACGCATAGCCGTTATCACTCGATTGGA | |
TCAAGCATACGACATAACAAGAAAAACGTAGACAAAAACGACCTAAATCGTCGCCGTACG | |
GGCCCACCGAGGTATAGGCTCATATTTCGCAAGGTTTTAGATTTTAGGGTACTACTTAGG | |
ACTTGATGCGTTCGTCCGATAACATCGTTGGCCC | |
>Rosalind_8087 | |
TTAAAAAGCAAGCGGAAGAGCCTAAATTAATTGCATGCGGGTGCTTGGTGCTCTCACAAC | |
TCCGGGGGTTTGCTCAATGCCGCATCGCTAAGTCGCTATGATGAGATGAAGTACTTTTAG | |
TGGGACCCTGCCCTGTTGGCTCACTGGTGGGTTCGGACTATAGGCTCGTTCCCCGCGAGG | |
AAAGCCGCTCATGGAATTGAGCAAGTAGCGACTTTATGGGGTCCGCTGTAGCATACATGA | |
ACGAAAAGCAGGCGCAGCAAGTGTACGTTTACCAATTTGAAGGCGAACTAGTTTTAGGAC | |
AGATGGATTCTTCTCGACAACAAATTGCCGAATTGTCTCAACTCTCGACTGCCTAAGCGA | |
AAGAAAGAACTTGACTGTCCGGTTGCCTAGCATCATCAGGTTGCGTATCCAGTAGCAATT | |
TAATTGACTTGTAAACTGCTCCAACAAATGGCGACTGTTGGTAAGTAACCCACAATTGAC | |
TTCATTATGGTTGAGCCAGGTAGGCCGAACGTCTATTATTCCGAAAACCAGCTTCAGCCT | |
AAGGACGACTCGGTTCTTAACACCACTCTAGGTGGTACATTTTAGCCTGTTGCTCCTCCT | |
CGACCAAAATATATGCCTGCTATGTTATGCCACGTGAGCCCTCAGTCATGCGGTCCACTC | |
GTAGATCCATAACAATGGCTGGTCCTATGTGATCCCACACGCCACCTACACATAGGCTGA | |
CTTAAGTTCTGTCTGTTATAAAGGCGAGTGTGGAGACCGTGATGCGGCGACATAGTACCT | |
CAACGTAGCCATCATACAATCTAAGTACACAGCATTTCTTATTAAGCAAGGACCTAGGCG | |
TTCTATTGTTCTGGCAAAAAGCAACTCAACCAGAAGTGTAACCCGTTGCTGGCGGGTCAA | |
TACAAGCCGAGTTGCATTCAAAATCTCTGCGGAATGGGCCCGAACCACAGAACATTAGTT | |
CTTTTCTGTGG | |
>Rosalind_4878 | |
GTACTGGCCCCGGTTGTCGATCGGATTAATTCAAAAACCGTCGTTTGTTCTGTGTGGCAA | |
GGTTGAATATTGAGCCGTCTATGAAGATGCTCATCGGTTCGGTACGTCACCTCTATTAAG | |
CAAGGAGCAGCTCATGGACCGAGTCCCGACAAGTTACGTTGCTGTCCTGTCGTTCCATCC | |
CCCTCTTCCGACAATTTCTGCGTTCGTCTGTTGTAGACCCCATATGATTCGACTTTCAAC | |
GCACACCCGGAAGTGTTCCGCTGCTCTATTGACTCCCCGATGCTGATTCTTTTTACACCC | |
CTCGAGGCAAGGCCCCGTTTCATGTTGGACAGATGGAGTACATCCTTCGCCCATACTTGT | |
AGCTTGTAGCCCTGGATACTTGTAAGAAGCTTTGACAAGAGTCTCTCCTACTATCCCTTC | |
TTAGTGCTTAGCCAGTAGAATTTATCTACGTCGGTTTTTTAACTTTACGTGTCAAATAAC | |
GTTCTGCATATTTTCCTACAGGGTAAGCAACTACTCCAACGATACACTTGTGACGTGGCT | |
GTCTAGTCACCAACACGGACTTCCTTACCATACGATCGAAAAAGGGCTATGACGACATGG | |
TTTGCTCTAAAACCGTGGGTGTTTTTGCTATGGGGCTTTGTGGGCGCGATCTAAGGATGC | |
TCGTCTATTGCTGCACATAAATTTAGAAGAATCGCCCGGGCTGTCAAGGCGTATTGACAG | |
ACTTCATCATGGCAATCACAGGAATCACCGAGGACACGTTTGGTTTTTCTCAAGGTCAGG | |
GTTGTGCGGTGCCTCTATCTATACACTATTACATTCACGCGCAGGAAAGCATGCTTTTAT | |
TGTACCCTAAGGCGGCCAGAGGCCACGAAGGAAAATTTACTGGTCAGCT | |
>Rosalind_6943 | |
CAGGCCCAAAAGGGATCTTAGTATTTCAGACCGAGTACAAGGATCATCGGAGCCTTAGCC | |
CGTACTACTGGTGGGAATTTCTACATCTTTGCCGAGGGCCTATAGTATGGGAGGTTGTCC | |
GTGGACTTTCCGGCTACCAGTGTTTACGATGACTGGTCAACAAAACTTGGACTGGAGCTA | |
ACGCGTTCGGGGGCATGGGCGCTTTGCCCGGAGGTATAGATAGATATGAATGAAACGCGA | |
GAATACTTCTGCGTCGGTTGTATAGAAGGACACGTGAGAGACAGTGTGGTCCTGACCTGG | |
GTTAAGTGTCTCCTTTCGCGTCTTTTCTCTCCCCCGTTCGGAACACGTATCGACGCAATG | |
ACGTCCGCTAGGGGCTCCACTTGATTTCGTGATGACAACTGGTCGTTTATGACCCGCTCC | |
CTGCCAATTGGTGCCCCGGACGGTACGTAGTTGACGGCACATATGACAAAGGGCATTGAC | |
ATACATTAGTTCGGTTTTCACCGGACGCGTTACAAGAGCCCTCAAGCCTTATTTCGATTC | |
CCACTGTCTAAAGGCAAGTCTCCTTGTAAGGAGACCCGCGCCCCTCATCTTTCTCTCGCG | |
TACGGAGTGAGGGGCGTTAGATGAATCGTTAGCGGTCGGGCCCGCCTTACGCATAACCAA | |
GGTTACCGATAACGCCTCATCACTTCTCATATTTCCCATTAATATCCCTTGCACGTTAGA | |
GTTCTTGGTTGGCGTGTGAGTGATAGTCATAGAATCGATTAGCGGTGACTTGTCCCTTCA | |
CGCGGCTCGAGCTGGAATCGATTGG") == "Rosalind_6943 | |
51.4285714" | |
end | |
end |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment