Draft version of INSDC (DDBJ/EMBL/GenBank/RefSeq) ontology in RDF/Turtle format.
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@prefix owl: <http://www.w3.org/2002/07/owl#> . | |
@prefix rdf: <http://www.w3.org/1999/02/22-rdf-syntax-ns#> . | |
@prefix rdfs: <http://www.w3.org/2000/01/rdf-schema#> . | |
@prefix xml: <http://www.w3.org/XML/1998/namespace> . | |
@prefix xsd: <http://www.w3.org/2001/XMLSchema#> . | |
@prefix obo: <http://purl.obolibrary.org/obo/> . | |
@prefix : <http://insdc.org/owl/#> . | |
<http://insdc.org/owl/> | |
a owl:Ontology . | |
### Classes | |
<http://insdc.org/owl/Entry> | |
a owl:Class . | |
<http://insdc.org/owl/Feature> | |
a owl:Class . | |
<http://indsc.org/owl/Qualifier> | |
a owl:Class . | |
<http://insdc.org/owl/Keyword> | |
a owl:Class . | |
<http://insdc.org/owl/Reference> | |
a owl:Class . | |
<http://insdc.org/owl/DbXref> | |
a owl:Class . | |
<http://insdc.org/owl/Location> | |
a owl:Class . | |
<http://insdc.org/owl/Sequence> | |
a owl:Class . | |
### Properties | |
# LOCUS | |
<http://insdc.org/owl/locus> | |
a owl:DatatypeProperty ; | |
rdfs:domain <http://insdc.org/owl/Entry> ; | |
rdfs:range xsd:string . | |
<http://insdc.org/owl/length> | |
a owl:DatatypeProperty ; | |
rdfs:domain <http://insdc.org/owl/Sequence> ; | |
rdfs:range xsd:integer . | |
# spaces, ss- (single-stranded), ds- (double-stranded), or ms- (mixed-stranded) | |
# SO_0000983 (so:strand_attribute) | |
# SO_0000984 (so:single) | |
# SO_0000985 (so:double) | |
<http://insdc.org/owl/strand> | |
a owl:ObjectProperty ; | |
rdfs:domain <http://insdc.org/owl/Entry> ; | |
rdfs:range [ | |
a owl:Class ; | |
owl:unionOf (obo:SO_0000984 obo:SO_0000985) | |
] . | |
# NA, DNA, RNA, tRNA (transfer RNA), rRNA (ribosomal RNA), mRNA (messenger RNA), uRNA (small nuclear RNA). | |
# SO_0000348 (so:nucleic_acid) | |
# SO_0000352 (so:DNA) | |
# SO_0000356 (so:RNA) | |
# SO_0000253 (so:tRNA) | |
# SO_0000252 (so:rRNA) | |
# SO_0000234 (so:mRNA) | |
# SO_0000274 (so:snRNA) | |
<http://insdc.org/owl/molecule> | |
a owl:ObjectProperty ; | |
rdfs:domain <http://insdc.org/owl/Entry> ; | |
rdfs:range [ | |
a owl:Class ; | |
owl:unionOf (obo:SO_0000348 obo:SO_0000352 obo:SO_0000356 obo:SO_0000253 obo:obo:SO_0000252 obo:SO_0000234 obo:SO_0000274) | |
] . | |
# 'linear' followed by two spaces, or 'circular' | |
# SO_0000987 (so:linear) | |
# SO_0000988 (so:circular) | |
<http://insdc.org/owl/topology> | |
a owl:ObjectProperty ; | |
rdfs:domain <http://insdc.org/owl/Sequence> ; | |
rdfs:range [ | |
a owl:Class ; | |
owl:unionOf (obo:SO_0000987 obo:SO_0000988) | |
] . | |
<http://insdc.org/owl/division> | |
a owl:ObjectProperty ; | |
rdfs:domain <http://insdc.org/owl/Entry> . | |
<http://insdc.org/owl/date> | |
a owl:DatatypeProperty ; | |
rdfs:domain <http://insdc.org/owl/Entry> ; | |
rdfs:range xsd:date . | |
# Entry | |
<http://insdc.org/owl/definition> | |
a owl:DatatypeProperty ; | |
rdfs:domain <http://insdc.org/owl/Entry> ; | |
rdfs:range xsd:string . | |
<http://insdc.org/owl/accession> | |
a owl:DatatypeProperty ; | |
rdfs:domain <http://insdc.org/owl/Entry> ; | |
rdfs:range xsd:string . | |
<http://insdc.org/owl/version> | |
a owl:DatatypeProperty ; | |
rdfs:domain <http://insdc.org/owl/Entry> ; | |
rdfs:range xsd:integer . | |
<http://insdc.org/owl/project> | |
a owl:DatatypeProperty ; | |
rdfs:domain <http://insdc.org/owl/Entry> ; | |
rdfs:range xsd:string . | |
<http://insdc.org/owl/dblink> | |
a owl:ObjectProperty ; | |
rdfs:domain <http://insdc.org/owl/Entry> . | |
<http://insdc.org/owl/keyword> | |
a owl:ObjectProperty ; | |
rdfs:domain <http://insdc.org/owl/Entry> ; | |
rdfs:range <http://insdc.org/owl/Keyword> . | |
<http://insdc.org/owl/segment> | |
a owl:DatatypeProperty ; | |
rdfs:domain <http://insdc.org/owl/Entry> ; | |
rdfs:range xsd:string . | |
<http://insdc.org/owl/organism> | |
a owl:DatatypeProperty ; | |
rdfs:domain <http://insdc.org/owl/Entry> ; | |
rdfs:range xsd:string . | |
<http://insdc.org/owl/lineage> | |
a owl:DatatypeProperty ; | |
rdfs:domain <http://insdc.org/owl/Entry> ; | |
rdfs:range xsd:string . | |
<http://insdc.org/owl/reference> | |
a owl:ObjectProperty ; | |
rdfs:domain <http://insdc.org/owl/Entry> ; | |
rdfs:range <http://insdc.org/owl/Reference> . | |
<http://insdc.org/owl/comment> | |
a owl:DatatypeProperty ; | |
rdfs:domain <http://insdc.org/owl/Entry> ; | |
rdfs:range xsd:string . | |
<http://insdc.org/owl/feature> | |
a owl:ObjectProperty ; | |
rdfs:domain <http://insdc.org/owl/Entry> ; | |
rdfs:range <http://insdc.org/owl/Feature> . | |
<http://insdc.org/owl/qualifier> | |
a owl:ObjectProperty ; | |
rdfs:domain <http://insdc.org/owl/Feature> ; | |
rdfs:range <http://insdc.org/owl/Qualifier> . | |
# Sequence | |
<http://insdc.org/owl/contig> | |
a owl:DatatypeProperty ; | |
rdfs:domain <http://insdc.org/owl/Entry> ; | |
rdfs:range xsd:string . | |
<http://insdc.org/owl/sequence> | |
a owl:ObjectProperty ; | |
rdfs:domain <http://insdc.org/owl/Entry> ; | |
rdfs:range <http://insdc.org/owl/Sequence> . | |
### Sub Classes | |
# Feature Key -- the feature key name | |
<http://insdc.org/owl/FK0001> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "source" . | |
<http://insdc.org/owl/FK0002> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "assembly_gap" . | |
<http://insdc.org/owl/FK0003> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "attenuator" . | |
<http://insdc.org/owl/FK0004> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "C_region" . | |
<http://insdc.org/owl/FK0005> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "CAAT_signal" . | |
<http://insdc.org/owl/FK0006> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "CDS" . | |
<http://insdc.org/owl/FK0007> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "centromere" . | |
<http://insdc.org/owl/FK0008> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "D-loop" . | |
<http://insdc.org/owl/FK0009> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "D_segment" . | |
<http://insdc.org/owl/FK0010> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "enhancer" . | |
<http://insdc.org/owl/FK0011> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "exon" . | |
<http://insdc.org/owl/FK0012> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "gap" . | |
<http://insdc.org/owl/FK0013> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "GC_signal" . | |
<http://insdc.org/owl/FK0014> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "gene" . | |
<http://insdc.org/owl/FK0015> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "iDNA" . | |
<http://insdc.org/owl/FK0016> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "intron" . | |
<http://insdc.org/owl/FK0017> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "J_segment" . | |
<http://insdc.org/owl/FK0018> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "LTR" . | |
<http://insdc.org/owl/FK0019> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "mat_peptide" . | |
<http://insdc.org/owl/FK0020> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "misc_binding" . | |
<http://insdc.org/owl/FK0021> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "misc_difference" . | |
<http://insdc.org/owl/FK0022> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "misc_feature" . | |
<http://insdc.org/owl/FK0023> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "misc_recomb" . | |
<http://insdc.org/owl/FK0024> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "misc_RNA" . | |
<http://insdc.org/owl/FK0025> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "misc_signal" . | |
<http://insdc.org/owl/FK0026> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "misc_structure" . | |
<http://insdc.org/owl/FK0027> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "mobile_element" . | |
<http://insdc.org/owl/FK0028> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "modified_base" . | |
<http://insdc.org/owl/FK0029> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "mRNA" . | |
<http://insdc.org/owl/FK0030> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "ncRNA" . | |
<http://insdc.org/owl/FK0031> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "N_region" . | |
<http://insdc.org/owl/FK0032> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "old_sequence" . | |
<http://insdc.org/owl/FK0033> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "operon" . | |
<http://insdc.org/owl/FK0034> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "oriT" . | |
<http://insdc.org/owl/FK0035> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "polyA_signal" . | |
<http://insdc.org/owl/FK0036> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "polyA_site" . | |
<http://insdc.org/owl/FK0037> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "precursor_RNA" . | |
<http://insdc.org/owl/FK0038> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "prim_transcript" . | |
<http://insdc.org/owl/FK0039> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "primer_bind" . | |
<http://insdc.org/owl/FK0040> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "promoter" . | |
<http://insdc.org/owl/FK0041> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "protein_bind" . | |
<http://insdc.org/owl/FK0042> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "RBS" . | |
<http://insdc.org/owl/FK0043> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "repeat_region" . | |
<http://insdc.org/owl/FK0044> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "rep_origin" . | |
<http://insdc.org/owl/FK0045> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "rRNA" . | |
<http://insdc.org/owl/FK0046> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "S_region" . | |
<http://insdc.org/owl/FK0047> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "sig_peptide" . | |
<http://insdc.org/owl/FK0048> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "stem_loop" . | |
<http://insdc.org/owl/FK0049> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "STS" . | |
<http://insdc.org/owl/FK0050> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "TATA_signal" . | |
<http://insdc.org/owl/FK0051> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "telomere" . | |
<http://insdc.org/owl/FK0052> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "terminator" . | |
<http://insdc.org/owl/FK0053> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "tmRNA" . | |
<http://insdc.org/owl/FK0054> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "transit_peptide" . | |
<http://insdc.org/owl/FK0055> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "tRNA" . | |
<http://insdc.org/owl/FK0056> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "unsure" . | |
<http://insdc.org/owl/FK0057> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "V_region" . | |
<http://insdc.org/owl/FK0058> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "V_segment" . | |
<http://insdc.org/owl/FK0059> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "variation" . | |
<http://insdc.org/owl/FK0060> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "3'UTR" . | |
<http://insdc.org/owl/FK0061> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "5'UTR" . | |
<http://insdc.org/owl/FK0062> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "-10_signal" . | |
<http://insdc.org/owl/FK0063> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Feature> ; | |
rdfs:label "-35_signal" . | |
# Qualifier -- name of qualifier; qualifier requires a value if followed by an equal sign | |
<http://insdc.org/owl/FQ0001> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "allele" . | |
<http://insdc.org/owl/FQ0002> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "altitude" . | |
<http://insdc.org/owl/FQ0003> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "anticodon" . | |
<http://insdc.org/owl/FQ0004> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "artificial_location" . | |
<http://insdc.org/owl/FQ0005> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "bio_material" . | |
<http://insdc.org/owl/FQ0006> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "bound_moiety" . | |
<http://insdc.org/owl/FQ0007> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "cell_line" . | |
<http://insdc.org/owl/FQ0008> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "cell_type" . | |
<http://insdc.org/owl/FQ0009> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "chromosome" . | |
<http://insdc.org/owl/FQ0010> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "citation" . | |
<http://insdc.org/owl/FQ0011> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "clone" . | |
<http://insdc.org/owl/FQ0012> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "clone_lib" . | |
<http://insdc.org/owl/FQ0013> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "codon_start" . | |
<http://insdc.org/owl/FQ0014> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "collected_by " . | |
<http://insdc.org/owl/FQ0015> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "collection_date " . | |
<http://insdc.org/owl/FQ0016> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "compare" . | |
<http://insdc.org/owl/FQ0017> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "country" . | |
<http://insdc.org/owl/FQ0018> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "cultivar" . | |
<http://insdc.org/owl/FQ0019> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "culture_collection" . | |
<http://insdc.org/owl/FQ0020> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "db_xref" . | |
<http://insdc.org/owl/FQ0021> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "dev_stage" . | |
<http://insdc.org/owl/FQ0022> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "direction" . | |
<http://insdc.org/owl/FQ0023> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "EC_number" . | |
<http://insdc.org/owl/FQ0024> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "ecotype" . | |
<http://insdc.org/owl/FQ0025> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "environmental_sample" . | |
<http://insdc.org/owl/FQ0026> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "estimated_length" . | |
<http://insdc.org/owl/FQ0027> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "exception" . | |
<http://insdc.org/owl/FQ0028> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "experiment" . | |
<http://insdc.org/owl/FQ0029> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "focus" . | |
<http://insdc.org/owl/FQ0030> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "frequency" . | |
<http://insdc.org/owl/FQ0031> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "function" . | |
<http://insdc.org/owl/FQ0032> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "gap_type" . | |
<http://insdc.org/owl/FQ0033> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "gene" . | |
<http://insdc.org/owl/FQ0034> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "gene_synonym" . | |
<http://insdc.org/owl/FQ0035> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "germline" . | |
<http://insdc.org/owl/FQ0036> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "haplogroup" . | |
<http://insdc.org/owl/FQ0037> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "haplotype" . | |
<http://insdc.org/owl/FQ0038> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "host" . | |
<http://insdc.org/owl/FQ0039> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "identified_by " . | |
<http://insdc.org/owl/FQ0040> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "inference" . | |
<http://insdc.org/owl/FQ0041> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "isolate" . | |
<http://insdc.org/owl/FQ0042> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "isolation_source" . | |
<http://insdc.org/owl/FQ0043> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "lab_host" . | |
<http://insdc.org/owl/FQ0044> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "lat_lon " . | |
<http://insdc.org/owl/FQ0045> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "linkage_evidence" . | |
<http://insdc.org/owl/FQ0046> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "locus_tag" . | |
<http://insdc.org/owl/FQ0047> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "macronuclear" . | |
<http://insdc.org/owl/FQ0048> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "map" . | |
<http://insdc.org/owl/FQ0049> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "mating_type" . | |
<http://insdc.org/owl/FQ0050> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "mobile_element_type" . | |
<http://insdc.org/owl/FQ0051> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "mod_base" . | |
<http://insdc.org/owl/FQ0052> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "mol_type" . | |
<http://insdc.org/owl/FQ0053> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "ncRNA_class" . | |
<http://insdc.org/owl/FQ0054> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "note" . | |
<http://insdc.org/owl/FQ0055> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "number" . | |
<http://insdc.org/owl/FQ0056> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "old_locus_tag" . | |
<http://insdc.org/owl/FQ0057> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "operon" . | |
<http://insdc.org/owl/FQ0058> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "organelle " . | |
<http://insdc.org/owl/FQ0059> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "organism" . | |
<http://insdc.org/owl/FQ0060> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "partial" . | |
<http://insdc.org/owl/FQ0061> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "PCR_conditions" . | |
<http://insdc.org/owl/FQ0062> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "PCR_primers" . | |
<http://insdc.org/owl/FQ0063> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "phenotype" . | |
<http://insdc.org/owl/FQ0064> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "plasmid" . | |
<http://insdc.org/owl/FQ0065> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "pop_variant" . | |
<http://insdc.org/owl/FQ0066> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "product" . | |
<http://insdc.org/owl/FQ0067> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "protein_id" . | |
<http://insdc.org/owl/FQ0068> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "proviral" . | |
<http://insdc.org/owl/FQ0069> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "pseudo" . | |
<http://insdc.org/owl/FQ0070> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "pseudogene" . | |
<http://insdc.org/owl/FQ0071> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "rearranged" . | |
<http://insdc.org/owl/FQ0072> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "replace" . | |
<http://insdc.org/owl/FQ0073> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "ribosomal_slippage" . | |
<http://insdc.org/owl/FQ0074> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "rpt_family" . | |
<http://insdc.org/owl/FQ0075> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "rpt_type" . | |
<http://insdc.org/owl/FQ0076> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "rpt_unit_range" . | |
<http://insdc.org/owl/FQ0077> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "rpt_unit_seq" . | |
<http://insdc.org/owl/FQ0078> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "satellite" . | |
<http://insdc.org/owl/FQ0079> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "segment" . | |
<http://insdc.org/owl/FQ0080> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "serotype" . | |
<http://insdc.org/owl/FQ0081> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "serovar" . | |
<http://insdc.org/owl/FQ0082> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "sex" . | |
<http://insdc.org/owl/FQ0083> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "specimen_voucher" . | |
<http://insdc.org/owl/FQ0084> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "standard_name" . | |
<http://insdc.org/owl/FQ0085> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "strain" . | |
<http://insdc.org/owl/FQ0086> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "sub_clone" . | |
<http://insdc.org/owl/FQ0087> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "sub_species" . | |
<http://insdc.org/owl/FQ0088> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "sub_strain" . | |
<http://insdc.org/owl/FQ0089> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "tag_peptide" . | |
<http://insdc.org/owl/FQ0090> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "tissue_lib" . | |
<http://insdc.org/owl/FQ0091> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "tissue_type" . | |
<http://insdc.org/owl/FQ0092> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "transgenic" . | |
<http://insdc.org/owl/FQ0093> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "translation" . | |
<http://insdc.org/owl/FQ0094> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "transl_except" . | |
<http://insdc.org/owl/FQ0095> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "transl_table" . | |
<http://insdc.org/owl/FQ0096> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "trans_splicing " . | |
<http://insdc.org/owl/FQ0097> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/Qualifier> ; | |
rdfs:label "variety" . | |
# DB cross reference | |
<http://insdc.org/owl/DB0001> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "taxon" . | |
<http://insdc.org/owl/DB0002> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "PubMed" . | |
<http://insdc.org/owl/DB0003> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "BioProject" . | |
<http://insdc.org/owl/DB0004> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "RefSeq" . | |
<http://insdc.org/owl/DB0005> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "GI" . | |
<http://insdc.org/owl/DB0006> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "GeneID" . | |
<http://insdc.org/owl/DB0007> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "Protein" . | |
<http://insdc.org/owl/DB0008> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "UniSTS" . | |
<http://insdc.org/owl/DB0009> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "ASAP" . | |
<http://insdc.org/owl/DB0010> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "ATCC" . | |
<http://insdc.org/owl/DB0011> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "CDD" . | |
<http://insdc.org/owl/DB0012> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "ECOCYC" . | |
<http://insdc.org/owl/DB0013> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "EcoGene" . | |
<http://insdc.org/owl/DB0014> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "ERIC" . | |
<http://insdc.org/owl/DB0015> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "GO" . | |
<http://insdc.org/owl/DB0016> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "GOA" . | |
<http://insdc.org/owl/DB0017> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "Greengenes" . | |
<http://insdc.org/owl/DB0018> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "HMP" . | |
<http://insdc.org/owl/DB0019> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "HOMD" . | |
<http://insdc.org/owl/DB0020> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "HSSP" . | |
<http://insdc.org/owl/DB0021> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "ISFinder" . | |
<http://insdc.org/owl/DB0022> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "InterPro" . | |
<http://insdc.org/owl/DB0023> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "NBRC" . | |
<http://insdc.org/owl/DB0024> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "Pathema" . | |
<http://insdc.org/owl/DB0025> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "PDB" . | |
<http://insdc.org/owl/DB0026> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "PFAM" . | |
<http://insdc.org/owl/DB0027> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "PSEUDO" . | |
<http://insdc.org/owl/DB0028> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "PseudoCap" . | |
<http://insdc.org/owl/DB0029> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "REBASE" . | |
<http://insdc.org/owl/DB0030> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "TIGRFAM" . | |
<http://insdc.org/owl/DB0031> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "UniProtKB/Swiss-Prot" . | |
<http://insdc.org/owl/DB0032> | |
a owl:Class ; | |
rdfs:subClassOf <http://insdc.org/owl/DbXref> ; | |
rdfs:label "UniProtKB/TrEMBL" . |
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