kuangllbnu

/*
 * Copyright (c) 2011-2013 NVIDIA Corporation. All rights reserved.
 *
 * Redistribution and use in source and binary forms, with or without 
 * modification, are permitted provided that the following conditions are met:
 *
 *   Redistributions of source code must retain the above copyright notice, 
 *   this list of conditions and the following disclaimer.
 *
 *   Redistributions in binary form must reproduce the above copyright notice,

kuangllbnu

#!/bin/bash

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## In this gist, we'll reuse the commands from our 3.6 tutorial to align reads and generate BAM files.
## Check out the full post at https://medium.com/@johnnyisraeli/accelerating-germline-and-somatic-genomic-analysis-of-whole-genomes-and-exomes-with-nvidia-clara-e3deeae2acc9
and Gists at:
## https://gist.github.com/edawson/e84b2785db75d3c0aea9cc6a59969d45#file-full_pipeline_and_data_prep_parabricks3-6-sh
## and 
## https://gist.github.com/edawson/e84b2785db75d3c0aea9cc6a59969d45#file-step_1_align_reads_parabricks3-6-sh
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