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December 2, 2016 21:48
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| /data/Development/compliance-checker stringerror ✔ | |
| $ conda list | |
| # packages in environment at /home/kwilcox/miniconda3/envs/cc35: | |
| # | |
| Using Anaconda API: https://api.anaconda.org | |
| arrow 0.8.0 py35_0 conda-forge | |
| ca-certificates 2016.9.26 0 conda-forge | |
| certifi 2016.9.26 py35_0 conda-forge | |
| cf_units 1.1.3 py35_0 conda-forge | |
| curl 7.49.1 1 conda-forge | |
| expat 2.1.0 2 conda-forge | |
| hdf4 4.2.12 0 conda-forge | |
| hdf5 1.8.17 7 conda-forge | |
| icu 56.1 4 conda-forge | |
| isodate 0.5.4 py35_0 conda-forge | |
| jinja2 2.8 py35_1 conda-forge | |
| jpeg 9b 0 conda-forge | |
| libiconv 1.14 3 conda-forge | |
| libnetcdf 4.4.1.1 0 conda-forge | |
| libxml2 2.9.3 9 conda-forge | |
| libxslt 1.1.29 1 conda-forge | |
| lxml 3.6.4 py35_1 conda-forge | |
| markupsafe 0.23 py35_0 conda-forge | |
| ncurses 5.9 10 conda-forge | |
| netcdf4 1.2.5 np111py35_0 conda-forge | |
| openssl 1.0.2h 3 conda-forge | |
| owslib 0.13.0 py35_0 conda-forge | |
| pip 9.0.1 py35_0 conda-forge | |
| py 1.4.31 py35_0 conda-forge | |
| pygeoif 0.6 py35_1 conda-forge | |
| pyproj 1.9.5.1 py35_0 conda-forge | |
| pytest 3.0.4 py35_0 conda-forge | |
| python 3.5.2 2 conda-forge | |
| python-dateutil 2.6.0 py35_0 conda-forge | |
| pytz 2016.7 py35_0 conda-forge | |
| readline 6.2 0 conda-forge | |
| requests 2.12.1 py35_0 conda-forge | |
| setuptools 29.0.1 py35_1 conda-forge | |
| six 1.10.0 py35_1 conda-forge | |
| sqlite 3.13.0 1 conda-forge | |
| tk 8.5.19 0 conda-forge | |
| udunits2 2.2.20 1 conda-forge | |
| wheel 0.29.0 py35_0 conda-forge | |
| xz 5.2.2 0 conda-forge | |
| zlib 1.2.8 3 conda-forge | |
| httpretty 0.8.14 py35_0 defaults | |
| libgfortran 3.0.0 1 defaults | |
| mkl 11.3.3 0 defaults | |
| numpy 1.11.2 py35_0 defaults |
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| ===================================================================== FAILURES ===================================================================== | |
| ____________________________________________________________ TestCF.test_check_calendar ____________________________________________________________ | |
| self = test_check_calendar ( compliance_checker.tests.test_cf:TestCF.test_check_calendar ) | |
| def test_check_calendar(self): | |
| dataset = self.load_dataset(STATIC_FILES['example-grid']) | |
| results = self.cf.check_calendar(dataset) | |
| for r in results: | |
| self.assertTrue(r.value) | |
| dataset = self.load_dataset(STATIC_FILES['bad']) | |
| results = self.cf.check_calendar(dataset) | |
| scored, out_of, messages = self.get_results(results) | |
| > assert "Variable time should have a valid calendar: 'nope' is not a valid calendar" in messages | |
| E AssertionError: assert "Variable time should have a valid calendar: 'nope' is not a valid calendar" in ["Variable bad_time_2 should have a v | |
| alid calendar: 'nope' is not a valid calendar"] | |
| compliance_checker/tests/test_cf.py:748: AssertionError | |
| ________________________________________________________ TestCF.test_check_time_coordinate _________________________________________________________ | |
| self = test_check_time_coordinate ( compliance_checker.tests.test_cf:TestCF.test_check_time_coordinate ) | |
| def test_check_time_coordinate(self): | |
| dataset = self.load_dataset(STATIC_FILES['example-grid']) | |
| results = self.cf.check_time_coordinate(dataset) | |
| for r in results: | |
| self.assertTrue(r.value) | |
| dataset = self.load_dataset(STATIC_FILES['bad']) | |
| results = self.cf.check_time_coordinate(dataset) | |
| scored, out_of, messages = self.get_results(results) | |
| > assert 'time does not have correct time units' in messages | |
| E AssertionError: assert 'time does not have correct time units' in ['bad_time_1 does not have units', 'bad_time_2 does not have correct time | |
| units'] | |
| compliance_checker/tests/test_cf.py:735: AssertionError | |
| __________________________________________________________ TestCF.test_naming_conventions __________________________________________________________ | |
| self = test_naming_conventions ( compliance_checker.tests.test_cf:TestCF.test_naming_conventions ) | |
| def test_naming_conventions(self): | |
| ''' | |
| Section 2.3 Naming Conventions | |
| Variable, dimension and attribute names should begin with a letter and be composed of letters, digits, and underscores. | |
| ''' | |
| dataset = self.load_dataset(STATIC_FILES['rutgers']) | |
| results = self.cf.check_naming_conventions(dataset) | |
| num_var = len(dataset.variables) | |
| result_dict = {result.name: result for result in results} | |
| result = result_dict[u'§2.3 Naming Conventions for variables'] | |
| assert result.value == (num_var, num_var) | |
| dataset = self.load_dataset(STATIC_FILES['bad']) | |
| results = self.cf.check_naming_conventions(dataset) | |
| result_dict = {result.name: result for result in results} | |
| result = result_dict[u'§2.3 Naming Conventions for variables'] | |
| > assert result.value == (13, 14) | |
| E AssertionError: assert (14, 15) == (13, 14) | |
| E At index 0 diff: 14 != 13 | |
| E Full diff: | |
| E - (14, 15) | |
| E + (13, 14) | |
| compliance_checker/tests/test_cf.py:120: AssertionError | |
| ___________________________________________________ TestFeatureDetection.test_trajectory_single ____________________________________________________ | |
| self = <compliance_checker.tests.test_feature_detection.TestFeatureDetection testMethod=test_trajectory_single> | |
| def test_trajectory_single(self): | |
| ''' | |
| Ensures trajectory-single detection works | |
| ''' | |
| with Dataset(resources.STATIC_FILES['trajectory-single']) as nc: | |
| for variable in util.get_geophysical_variables(nc): | |
| > assert util.is_single_trajectory(nc, variable), "{} is trajectory-single".format(variable) | |
| E AssertionError: temperature is trajectory-single | |
| E assert False | |
| E + where False = <function is_single_trajectory at 0x7f8810e696a8>(<class 'netCDF4._netCDF4.Dataset'>\nroot group (NETCDF3_CLASSIC | |
| data model, file format NETCDF3):\n dimensions(sizes)... lat(time), float32 lon(time), float32 z(time), float32 temperature(time)\n groups: \n | |
| , 'temperature') | |
| E + where <function is_single_trajectory at 0x7f8810e696a8> = util.is_single_trajectory | |
| compliance_checker/tests/test_feature_detection.py:64: AssertionError | |
| ====================================================== 4 failed, 113 passed in 50.54 seconds ======================================================= |
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