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kylebarlow/parse_ddg_data.py

Created October 25, 2016 00:06
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parse_ddg_data.py
import pandas as pd
def get_mutant_part_of_string(s):
return s.split()[1][-1]
df = pd.read_csv('/home/kyle/Downloads/uby_1ubq.tsv', sep='\t')
print df.head()
df.loc[:,'mut_aa'] = pd.Series(df['Mutation'].apply(get_mutant_part_of_string), index=df.index)
print df.head()
print df[ df.mut_aa == 'C' ].head()
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