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| dpkg-buildpackage -rfakeroot -D -us -uc -b | |
| dpkg-buildpackage: source package relion | |
| dpkg-buildpackage: source version 1.3+dfsg-3 | |
| dpkg-buildpackage: source distribution unstable | |
| dpkg-buildpackage: source changed by Roland Fehrenbacher <rf@q-leap.de> | |
| dpkg-source --before-build relion-1.3+dfsg | |
| dpkg-buildpackage: host architecture amd64 | |
| dpkg-source: info: using options from relion-1.3+dfsg/debian/source/options: --compression=xz | |
| fakeroot debian/rules clean | |
| Relion API Version = 1.3 | |
| Relion most recent (current) lib interface = 1 | |
| dh clean --parallel --with autoreconf | |
| dh_testdir | |
| dh_auto_clean | |
| make -j1 distclean | |
| make[1]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| rm -f project reconstruct refine preprocess postprocess autopick particle_polish particle_sort run_ctffind refine_mpi preprocess_mpi autopick_mpi particle_polish_mpi particle_sort_mpi run_ctffind_mpi manualpick display maingui mask_create stack_create image_handler find_tiltpairs | |
| test -z "librelion-1.3.la" || rm -f librelion-1.3.la | |
| rm -f ./so_locations | |
| rm -rf .libs _libs | |
| rm -rf src/.libs src/_libs | |
| rm -rf src/Healpix_2.15a/.libs src/Healpix_2.15a/_libs | |
| rm -f *.o | |
| rm -f src/*.o | |
| rm -f src/*.lo | |
| rm -f src/Healpix_2.15a/*.o | |
| rm -f src/Healpix_2.15a/*.lo | |
| rm -f src/apps/*.o | |
| rm -f *.lo | |
| rm -f *.tab.c | |
| test -z "relion-1.3.pc" || rm -f relion-1.3.pc | |
| test . = "." || test -z "" || rm -f | |
| rm -f src/.deps/.dirstamp | |
| rm -f src/.dirstamp | |
| rm -f src/Healpix_2.15a/.deps/.dirstamp | |
| rm -f src/Healpix_2.15a/.dirstamp | |
| rm -f src/apps/.deps/.dirstamp | |
| rm -f src/apps/.dirstamp | |
| rm -f config.h stamp-h1 | |
| rm -f libtool config.lt | |
| rm -f TAGS ID GTAGS GRTAGS GSYMS GPATH tags | |
| rm -f cscope.out cscope.in.out cscope.po.out cscope.files | |
| rm -f config.status config.cache config.log configure.lineno config.status.lineno | |
| rm -rf src/.deps src/Healpix_2.15a/.deps src/apps/.deps | |
| rm -f Makefile | |
| make[1]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| dh_autoreconf_clean | |
| dh_clean | |
| debian/rules build | |
| Relion API Version = 1.3 | |
| Relion most recent (current) lib interface = 1 | |
| dh build --parallel --with autoreconf | |
| dh_testdir | |
| dh_autoreconf | |
| libtoolize: putting auxiliary files in `.'. | |
| libtoolize: copying file `./ltmain.sh' | |
| libtoolize: Consider adding `AC_CONFIG_MACRO_DIR([m4])' to configure.ac and | |
| libtoolize: rerunning libtoolize, to keep the correct libtool macros in-tree. | |
| libtoolize: Consider adding `-I m4' to ACLOCAL_AMFLAGS in Makefile.am. | |
| configure.ac:16: installing './compile' | |
| configure.ac:19: installing './config.guess' | |
| configure.ac:19: installing './config.sub' | |
| configure.ac:4: installing './install-sh' | |
| configure.ac:4: installing './missing' | |
| Makefile.am: installing './INSTALL' | |
| /usr/share/automake-1.15/am/ltlibrary.am: warning: 'librelion-@RELION_API_VERSION@.la': linking libtool libraries using a non-POSIX | |
| /usr/share/automake-1.15/am/ltlibrary.am: archiver requires 'AM_PROG_AR' in 'configure.ac' | |
| Makefile.am:44: while processing Libtool library 'librelion-@RELION_API_VERSION@.la' | |
| Makefile.am: installing './depcomp' | |
| debian/rules override_dh_auto_build | |
| make[1]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| Relion API Version = 1.3 | |
| Relion most recent (current) lib interface = 1 | |
| # We need to build 4 different versions for the 4 different binary | |
| # packages. This is necessary because unfortunately the binaries work | |
| # only with the exact same librelion they were built with. | |
| # First no MPI, no GUI (for relion-bin) ... | |
| dh_auto_configure -- --libdir=\${prefix}/lib/x86_64-linux-gnu --disable-gui | |
| ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --libdir=\${prefix}/lib/x86_64-linux-gnu --disable-gui | |
| configure: WARNING: unrecognized options: --disable-maintainer-mode | |
| checking for a BSD-compatible install... /usr/bin/install -c | |
| checking whether build environment is sane... yes | |
| checking for a thread-safe mkdir -p... /bin/mkdir -p | |
| checking for gawk... no | |
| checking for mawk... mawk | |
| checking whether make sets $(MAKE)... yes | |
| checking whether make supports nested variables... yes | |
| checking for gcc... gcc | |
| checking whether the C compiler works... yes | |
| checking for C compiler default output file name... a.out | |
| checking for suffix of executables... | |
| checking whether we are cross compiling... no | |
| checking for suffix of object files... o | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether gcc accepts -g... yes | |
| checking for gcc option to accept ISO C89... none needed | |
| checking whether gcc understands -c and -o together... yes | |
| checking for style of include used by make... GNU | |
| checking dependency style of gcc... none | |
| checking for g++... g++ | |
| checking whether we are using the GNU C++ compiler... yes | |
| checking whether g++ accepts -g... yes | |
| checking dependency style of g++... none | |
| checking build system type... x86_64-pc-linux-gnu | |
| checking host system type... x86_64-pc-linux-gnu | |
| checking how to print strings... printf | |
| checking for a sed that does not truncate output... /bin/sed | |
| checking for grep that handles long lines and -e... /bin/grep | |
| checking for egrep... /bin/grep -E | |
| checking for fgrep... /bin/grep -F | |
| checking for ld used by gcc... /usr/bin/ld | |
| checking if the linker (/usr/bin/ld) is GNU ld... yes | |
| checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B | |
| checking the name lister (/usr/bin/nm -B) interface... BSD nm | |
| checking whether ln -s works... yes | |
| checking the maximum length of command line arguments... 1572864 | |
| checking whether the shell understands some XSI constructs... yes | |
| checking whether the shell understands "+="... yes | |
| checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop | |
| checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop | |
| checking for /usr/bin/ld option to reload object files... -r | |
| checking for objdump... objdump | |
| checking how to recognize dependent libraries... pass_all | |
| checking for dlltool... no | |
| checking how to associate runtime and link libraries... printf %s\n | |
| checking for ar... ar | |
| checking for archiver @FILE support... @ | |
| checking for strip... strip | |
| checking for ranlib... ranlib | |
| checking command to parse /usr/bin/nm -B output from gcc object... ok | |
| checking for sysroot... no | |
| checking for mt... no | |
| checking if : is a manifest tool... no | |
| checking how to run the C preprocessor... gcc -E | |
| checking for ANSI C header files... yes | |
| checking for sys/types.h... yes | |
| checking for sys/stat.h... yes | |
| checking for stdlib.h... yes | |
| checking for string.h... yes | |
| checking for memory.h... yes | |
| checking for strings.h... yes | |
| checking for inttypes.h... yes | |
| checking for stdint.h... yes | |
| checking for unistd.h... yes | |
| checking for dlfcn.h... yes | |
| checking for objdir... .libs | |
| checking if gcc supports -fno-rtti -fno-exceptions... no | |
| checking for gcc option to produce PIC... -fPIC -DPIC | |
| checking if gcc PIC flag -fPIC -DPIC works... yes | |
| checking if gcc static flag -static works... yes | |
| checking if gcc supports -c -o file.o... yes | |
| checking if gcc supports -c -o file.o... (cached) yes | |
| checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking whether -lc should be explicitly linked in... no | |
| checking dynamic linker characteristics... GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking whether stripping libraries is possible... yes | |
| checking if libtool supports shared libraries... yes | |
| checking whether to build shared libraries... yes | |
| checking whether to build static libraries... yes | |
| checking how to run the C++ preprocessor... g++ -E | |
| checking for ld used by g++... /usr/bin/ld -m elf_x86_64 | |
| checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes | |
| checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking for g++ option to produce PIC... -fPIC -DPIC | |
| checking if g++ PIC flag -fPIC -DPIC works... yes | |
| checking if g++ static flag -static works... yes | |
| checking if g++ supports -c -o file.o... yes | |
| checking if g++ supports -c -o file.o... (cached) yes | |
| checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking dynamic linker characteristics... (cached) GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking for fftw3.h... yes | |
| checking for main in -lfftw3... yes | |
| checking for fftw_plan_with_nthreads in -lfftw3_threads... yes | |
| checking that generated files are newer than configure... done | |
| configure: creating ./config.status | |
| config.status: creating Makefile | |
| config.status: creating relion-1.3.pc | |
| config.status: creating config.h | |
| config.status: executing depfiles commands | |
| config.status: executing libtool commands | |
| configure: WARNING: unrecognized options: --disable-maintainer-mode | |
| make ; make install prefix=/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr | |
| make[2]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| (CDPATH="${ZSH_VERSION+.}:" && cd . && /bin/bash /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/missing autoheader) | |
| rm -f stamp-h1 | |
| touch config.h.in | |
| cd . && /bin/bash ./config.status config.h | |
| config.status: creating config.h | |
| config.status: config.h is unchanged | |
| make all-am | |
| make[3]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/args.lo src/args.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/args.cpp -fPIC -DPIC -o src/.libs/args.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/args.cpp -o src/args.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/assembly.lo src/assembly.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/assembly.cpp -fPIC -DPIC -o src/.libs/assembly.o | |
| src/assembly.cpp: In member function 'void Assembly::writePDB(std::__cxx11::string)': | |
| src/assembly.cpp:363:61: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] | |
| molecules[imol].name.c_str()); | |
| ^ | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/assembly.cpp -o src/assembly.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/autopicker.lo src/autopicker.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/autopicker.cpp -fPIC -DPIC -o src/.libs/autopicker.o | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/strings.h:53, | |
| from ./src/filename.h:65, | |
| from ./src/image.h:59, | |
| from ./src/autopicker.h:10, | |
| from src/autopicker.cpp:20: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/autopicker.cpp -o src/autopicker.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/backprojector.lo src/backprojector.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/backprojector.cpp -fPIC -DPIC -o src/.libs/backprojector.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/backprojector.cpp -o src/backprojector.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/complex.lo src/complex.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/complex.cpp -fPIC -DPIC -o src/.libs/complex.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/complex.cpp -o src/complex.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ctf.lo src/ctf.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctf.cpp -fPIC -DPIC -o src/.libs/ctf.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctf.cpp -o src/ctf.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ctffind_runner.lo src/ctffind_runner.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctffind_runner.cpp -fPIC -DPIC -o src/.libs/ctffind_runner.o | |
| src/ctffind_runner.cpp: In member function 'void CtffindRunner::executeCtffind3(FileName)': | |
| src/ctffind_runner.cpp:237:28: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result] | |
| system ( fn_cmnd.c_str() ); | |
| ^ | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/args.h:54, | |
| from ./src/metadata_table.h:60, | |
| from ./src/ctffind_runner.h:29, | |
| from src/ctffind_runner.cpp:20: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctffind_runner.cpp -o src/ctffind_runner.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/error.lo src/error.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/error.cpp -fPIC -DPIC -o src/.libs/error.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/error.cpp -o src/error.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/euler.lo src/euler.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/euler.cpp -fPIC -DPIC -o src/.libs/euler.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/euler.cpp -o src/euler.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/exp_model.lo src/exp_model.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/exp_model.cpp -fPIC -DPIC -o src/.libs/exp_model.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/exp_model.cpp -o src/exp_model.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/fftw.lo src/fftw.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/fftw.cpp -fPIC -DPIC -o src/.libs/fftw.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/fftw.cpp -o src/fftw.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/filename.lo src/filename.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/filename.cpp -fPIC -DPIC -o src/.libs/filename.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/filename.cpp -o src/filename.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/funcs.lo src/funcs.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/funcs.cpp -fPIC -DPIC -o src/.libs/funcs.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/funcs.cpp -o src/funcs.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/healpix_sampling.lo src/healpix_sampling.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/healpix_sampling.cpp -fPIC -DPIC -o src/.libs/healpix_sampling.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/healpix_sampling.cpp -o src/healpix_sampling.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/image.lo src/image.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/image.cpp -fPIC -DPIC -o src/.libs/image.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/image.cpp -o src/image.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/mask.lo src/mask.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/mask.cpp -fPIC -DPIC -o src/.libs/mask.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/mask.cpp -o src/mask.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/matrix1d.lo src/matrix1d.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/matrix1d.cpp -fPIC -DPIC -o src/.libs/matrix1d.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/matrix1d.cpp -o src/matrix1d.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/matrix2d.lo src/matrix2d.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/matrix2d.cpp -fPIC -DPIC -o src/.libs/matrix2d.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/matrix2d.cpp -o src/matrix2d.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/memory.lo src/memory.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/memory.cpp -fPIC -DPIC -o src/.libs/memory.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/memory.cpp -o src/memory.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/metadata_container.lo src/metadata_container.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_container.cpp -fPIC -DPIC -o src/.libs/metadata_container.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_container.cpp -o src/metadata_container.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/metadata_label.lo src/metadata_label.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_label.cpp -fPIC -DPIC -o src/.libs/metadata_label.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_label.cpp -o src/metadata_label.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/metadata_table.lo src/metadata_table.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_table.cpp -fPIC -DPIC -o src/.libs/metadata_table.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_table.cpp -o src/metadata_table.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ml_model.lo src/ml_model.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_model.cpp -fPIC -DPIC -o src/.libs/ml_model.o | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/args.h:54, | |
| from ./src/multidim_array.h:54, | |
| from ./src/fftw.h:50, | |
| from ./src/projector.h:23, | |
| from ./src/ml_model.h:23, | |
| from src/ml_model.cpp:21: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_model.cpp -o src/ml_model.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ml_optimiser.lo src/ml_optimiser.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_optimiser.cpp -fPIC -DPIC -o src/.libs/ml_optimiser.o | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/args.h:54, | |
| from ./src/multidim_array.h:54, | |
| from ./src/fftw.h:50, | |
| from ./src/projector.h:23, | |
| from ./src/ml_model.h:23, | |
| from ./src/ml_optimiser.h:24, | |
| from src/ml_optimiser.cpp:20: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_optimiser.cpp -o src/ml_optimiser.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/multidim_array.lo src/multidim_array.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/multidim_array.cpp -fPIC -DPIC -o src/.libs/multidim_array.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/multidim_array.cpp -o src/multidim_array.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/numerical_recipes.lo src/numerical_recipes.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/numerical_recipes.cpp -fPIC -DPIC -o src/.libs/numerical_recipes.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/numerical_recipes.cpp -o src/numerical_recipes.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/parallel.lo src/parallel.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/parallel.cpp -fPIC -DPIC -o src/.libs/parallel.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/parallel.cpp -o src/parallel.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/particle_polisher.lo src/particle_polisher.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_polisher.cpp -fPIC -DPIC -o src/.libs/particle_polisher.o | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/strings.h:53, | |
| from ./src/filename.h:65, | |
| from ./src/image.h:59, | |
| from ./src/particle_polisher.h:23, | |
| from src/particle_polisher.cpp:21: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_polisher.cpp -o src/particle_polisher.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/particle_sorter.lo src/particle_sorter.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_sorter.cpp -fPIC -DPIC -o src/.libs/particle_sorter.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_sorter.cpp -o src/particle_sorter.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/postprocessing.lo src/postprocessing.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/postprocessing.cpp -fPIC -DPIC -o src/.libs/postprocessing.o | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/strings.h:53, | |
| from ./src/filename.h:65, | |
| from ./src/image.h:59, | |
| from ./src/postprocessing.h:24, | |
| from src/postprocessing.cpp:21: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/postprocessing.cpp -o src/postprocessing.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/preprocessing.lo src/preprocessing.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/preprocessing.cpp -fPIC -DPIC -o src/.libs/preprocessing.o | |
| src/preprocessing.cpp: In member function 'void Preprocessing::runExtractParticles()': | |
| src/preprocessing.cpp:286:42: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result] | |
| system(("mkdir -p " + fn_dir).c_str()); | |
| ^ | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/strings.h:53, | |
| from ./src/filename.h:65, | |
| from ./src/image.h:59, | |
| from ./src/preprocessing.h:29, | |
| from src/preprocessing.cpp:20: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/preprocessing.cpp -o src/preprocessing.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/projector.lo src/projector.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/projector.cpp -fPIC -DPIC -o src/.libs/projector.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/projector.cpp -o src/projector.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/strings.lo src/strings.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/strings.cpp -fPIC -DPIC -o src/.libs/strings.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/strings.cpp -o src/strings.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/symmetries.lo src/symmetries.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/symmetries.cpp -fPIC -DPIC -o src/.libs/symmetries.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/symmetries.cpp -o src/symmetries.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/tabfuncs.lo src/tabfuncs.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/tabfuncs.cpp -fPIC -DPIC -o src/.libs/tabfuncs.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/tabfuncs.cpp -o src/tabfuncs.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/time.lo src/time.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/time.cpp -fPIC -DPIC -o src/.libs/time.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/time.cpp -o src/time.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/transformations.lo src/transformations.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/transformations.cpp -fPIC -DPIC -o src/.libs/transformations.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/transformations.cpp -o src/transformations.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/Healpix_2.15a/cxxutils.lo src/Healpix_2.15a/cxxutils.cc | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/Healpix_2.15a/cxxutils.cc -fPIC -DPIC -o src/Healpix_2.15a/.libs/cxxutils.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/Healpix_2.15a/cxxutils.cc -o src/Healpix_2.15a/cxxutils.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/Healpix_2.15a/healpix_base.lo src/Healpix_2.15a/healpix_base.cc | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/Healpix_2.15a/healpix_base.cc -fPIC -DPIC -o src/Healpix_2.15a/.libs/healpix_base.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/Healpix_2.15a/healpix_base.cc -o src/Healpix_2.15a/healpix_base.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -version-info 1:3:0 -Wl,-z,relro -o librelion-1.3.la -rpath /usr/lib/x86_64-linux-gnu src/args.lo src/assembly.lo src/autopicker.lo src/backprojector.lo src/complex.lo src/ctf.lo src/ctffind_runner.lo src/error.lo src/euler.lo src/exp_model.lo src/fftw.lo src/filename.lo src/funcs.lo src/healpix_sampling.lo src/image.lo src/mask.lo src/matrix1d.lo src/matrix2d.lo src/memory.lo src/metadata_container.lo src/metadata_label.lo src/metadata_table.lo src/ml_model.lo src/ml_optimiser.lo src/multidim_array.lo src/numerical_recipes.lo src/parallel.lo src/particle_polisher.lo src/particle_sorter.lo src/postprocessing.lo src/preprocessing.lo src/projector.lo src/strings.lo src/symmetries.lo src/tabfuncs.lo src/time.lo src/transformations.lo src/Healpix_2.15a/cxxutils.lo src/Healpix_2.15a/healpix_base.lo -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/5/crtbeginS.o src/.libs/args.o src/.libs/assembly.o src/.libs/autopicker.o src/.libs/backprojector.o src/.libs/complex.o src/.libs/ctf.o src/.libs/ctffind_runner.o src/.libs/error.o src/.libs/euler.o src/.libs/exp_model.o src/.libs/fftw.o src/.libs/filename.o src/.libs/funcs.o src/.libs/healpix_sampling.o src/.libs/image.o src/.libs/mask.o src/.libs/matrix1d.o src/.libs/matrix2d.o src/.libs/memory.o src/.libs/metadata_container.o src/.libs/metadata_label.o src/.libs/metadata_table.o src/.libs/ml_model.o src/.libs/ml_optimiser.o src/.libs/multidim_array.o src/.libs/numerical_recipes.o src/.libs/parallel.o src/.libs/particle_polisher.o src/.libs/particle_sorter.o src/.libs/postprocessing.o src/.libs/preprocessing.o src/.libs/projector.o src/.libs/strings.o src/.libs/symmetries.o src/.libs/tabfuncs.o src/.libs/time.o src/.libs/transformations.o src/Healpix_2.15a/.libs/cxxutils.o src/Healpix_2.15a/.libs/healpix_base.o -lfftw3_threads -lfftw3 -L/usr/lib/gcc/x86_64-linux-gnu/5 -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/5/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu/crtn.o -O2 -Wl,-z -Wl,relro -Wl,-soname -Wl,librelion-1.3.so.1 -o .libs/librelion-1.3.so.1.0.3 | |
| libtool: link: (cd ".libs" && rm -f "librelion-1.3.so.1" && ln -s "librelion-1.3.so.1.0.3" "librelion-1.3.so.1") | |
| libtool: link: (cd ".libs" && rm -f "librelion-1.3.so" && ln -s "librelion-1.3.so.1.0.3" "librelion-1.3.so") | |
| libtool: link: ar cru .libs/librelion-1.3.a src/args.o src/assembly.o src/autopicker.o src/backprojector.o src/complex.o src/ctf.o src/ctffind_runner.o src/error.o src/euler.o src/exp_model.o src/fftw.o src/filename.o src/funcs.o src/healpix_sampling.o src/image.o src/mask.o src/matrix1d.o src/matrix2d.o src/memory.o src/metadata_container.o src/metadata_label.o src/metadata_table.o src/ml_model.o src/ml_optimiser.o src/multidim_array.o src/numerical_recipes.o src/parallel.o src/particle_polisher.o src/particle_sorter.o src/postprocessing.o src/preprocessing.o src/projector.o src/strings.o src/symmetries.o src/tabfuncs.o src/time.o src/transformations.o src/Healpix_2.15a/cxxutils.o src/Healpix_2.15a/healpix_base.o | |
| ar: `u' modifier ignored since `D' is the default (see `U') | |
| libtool: link: ranlib .libs/librelion-1.3.a | |
| libtool: link: ( cd ".libs" && rm -f "librelion-1.3.la" && ln -s "../librelion-1.3.la" "librelion-1.3.la" ) | |
| g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/project.o src/apps/project.cpp | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/args.h:54, | |
| from ./src/multidim_array.h:54, | |
| from ./src/fftw.h:50, | |
| from ./src/projector.h:23, | |
| from src/apps/project.cpp:21: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o project src/apps/project.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/project src/apps/project.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/reconstruct.o src/apps/reconstruct.cpp | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/args.h:54, | |
| from ./src/multidim_array.h:54, | |
| from ./src/fftw.h:50, | |
| from ./src/projector.h:23, | |
| from ./src/backprojector.h:31, | |
| from src/apps/reconstruct.cpp:21: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o reconstruct src/apps/reconstruct.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/reconstruct src/apps/reconstruct.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/refine.o src/apps/refine.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o refine src/apps/refine.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/refine src/apps/refine.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/preprocess.o src/apps/preprocess.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o preprocess src/apps/preprocess.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/preprocess src/apps/preprocess.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/postprocess.o src/apps/postprocess.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o postprocess src/apps/postprocess.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/postprocess src/apps/postprocess.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/autopick.o src/apps/autopick.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o autopick src/apps/autopick.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/autopick src/apps/autopick.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/particle_polish.o src/apps/particle_polish.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o particle_polish src/apps/particle_polish.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/particle_polish src/apps/particle_polish.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/particle_sort.o src/apps/particle_sort.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o particle_sort src/apps/particle_sort.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/particle_sort src/apps/particle_sort.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/run_ctffind.o src/apps/run_ctffind.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o run_ctffind src/apps/run_ctffind.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/run_ctffind src/apps/run_ctffind.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/mask_create.o src/apps/mask_create.cpp | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/strings.h:53, | |
| from ./src/filename.h:65, | |
| from ./src/image.h:59, | |
| from src/apps/mask_create.cpp:21: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o mask_create src/apps/mask_create.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/mask_create src/apps/mask_create.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/stack_create.o src/apps/stack_create.cpp | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/strings.h:53, | |
| from ./src/filename.h:65, | |
| from ./src/image.h:59, | |
| from src/apps/stack_create.cpp:21: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o stack_create src/apps/stack_create.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/stack_create src/apps/stack_create.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/image_handler.o src/apps/image_handler.cpp | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/strings.h:53, | |
| from ./src/filename.h:65, | |
| from ./src/image.h:59, | |
| from src/apps/image_handler.cpp:21: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o image_handler src/apps/image_handler.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/image_handler src/apps/image_handler.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/find_tiltpairs.o src/apps/find_tiltpairs.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o find_tiltpairs src/apps/find_tiltpairs.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/find_tiltpairs src/apps/find_tiltpairs.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| make[3]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make[2]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make[2]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make[3]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/lib/x86_64-linux-gnu' | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c librelion-1.3.la '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/librelion-1.3.so.1.0.3 /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 | |
| libtool: install: (cd /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/lib/x86_64-linux-gnu && { ln -s -f librelion-1.3.so.1.0.3 librelion-1.3.so.1 || { rm -f librelion-1.3.so.1 && ln -s librelion-1.3.so.1.0.3 librelion-1.3.so.1; }; }) | |
| libtool: install: (cd /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/lib/x86_64-linux-gnu && { ln -s -f librelion-1.3.so.1.0.3 librelion-1.3.so || { rm -f librelion-1.3.so && ln -s librelion-1.3.so.1.0.3 librelion-1.3.so; }; }) | |
| libtool: install: /usr/bin/install -c .libs/librelion-1.3.lai /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/lib/x86_64-linux-gnu/librelion-1.3.la | |
| libtool: install: /usr/bin/install -c .libs/librelion-1.3.a /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/lib/x86_64-linux-gnu/librelion-1.3.a | |
| libtool: install: chmod 644 /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/lib/x86_64-linux-gnu/librelion-1.3.a | |
| libtool: install: ranlib /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/lib/x86_64-linux-gnu/librelion-1.3.a | |
| libtool: install: warning: remember to run `libtool --finish /usr/lib/x86_64-linux-gnu' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin' | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c project '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_project' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/project /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_project | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c reconstruct '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_reconstruct' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/reconstruct /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_reconstruct | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c refine '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_refine' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/refine /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_refine | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c preprocess '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_preprocess' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/preprocess /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_preprocess | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c postprocess '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_postprocess' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/postprocess /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_postprocess | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c autopick '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_autopick' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/autopick /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_autopick | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c particle_polish '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_particle_polish' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/particle_polish /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_particle_polish | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c particle_sort '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_particle_sort' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/particle_sort /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_particle_sort | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c run_ctffind '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_run_ctffind' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/run_ctffind /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_run_ctffind | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c mask_create '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_mask_create' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/mask_create /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_mask_create | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c stack_create '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_stack_create' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/stack_create /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_stack_create | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c image_handler '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_image_handler' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/image_handler /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_image_handler | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c find_tiltpairs '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_find_tiltpairs' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/find_tiltpairs /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_find_tiltpairs | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin' | |
| /usr/bin/install -c scripts/star_datablock_ctfdat '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_star_datablock_ctfdat' | |
| /usr/bin/install -c scripts/star_datablock_stack '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_star_datablock_stack' | |
| /usr/bin/install -c scripts/star_datablock_singlefiles '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_star_datablock_singlefiles' | |
| /usr/bin/install -c scripts/star_loopheader '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_star_loopheader' | |
| /usr/bin/install -c scripts/star_plottable '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_star_plottable' | |
| /usr/bin/install -c scripts/star_printtable '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_star_printtable' | |
| /usr/bin/install -c scripts/qsub.csh '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/bin/./relion_qsub.csh' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/include/relion-1.3' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/include/relion-1.3/src' | |
| /usr/bin/install -c -m 644 src/args.h src/assembly.h src/autopicker.h src/backprojector.h src/complex.h src/ctf.h src/ctffind_runner.h src/displayer.h src/error.h src/euler.h src/exp_model.h src/fftw.h src/filename.h src/funcs.h src/gcc_version.h src/gui_entries.h src/gui_jobwindow.h src/gui_mainwindow.h src/healpix_sampling.h src/image.h src/macros.h src/mask.h src/matrix1d.h src/matrix2d.h src/memory.h src/metadata_container.h src/metadata_label.h src/metadata_table.h src/ml_model.h src/ml_optimiser.h src/multidim_array.h src/numerical_recipes.h src/parallel.h src/particle_polisher.h src/particle_sorter.h src/postprocessing.h src/preprocessing.h src/projector.h src/rwIMAGIC.h src/rwMRC.h '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/include/relion-1.3/src' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/include/relion-1.3/src' | |
| /usr/bin/install -c -m 644 src/rwSPIDER.h src/strings.h src/symmetries.h src/tabfuncs.h src/time.h src/transformations.h '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/include/relion-1.3/src' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/include/relion-1.3/src/Healpix_2.15a' | |
| /usr/bin/install -c -m 644 src/Healpix_2.15a/arr.h src/Healpix_2.15a/cxxutils.h src/Healpix_2.15a/datatypes.h src/Healpix_2.15a/geom_utils.h src/Healpix_2.15a/lsconstants.h src/Healpix_2.15a/message_error.h src/Healpix_2.15a/openmp_support.h src/Healpix_2.15a/pointing.h src/Healpix_2.15a/vec3.h src/Healpix_2.15a/healpix_base.h '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/include/relion-1.3/src/Healpix_2.15a' | |
| /usr/bin/install -c -m 644 relion.h '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/include/relion-1.3/.' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/lib/x86_64-linux-gnu/pkgconfig' | |
| /usr/bin/install -c -m 644 relion-1.3.pc '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/simple/usr/lib/x86_64-linux-gnu/pkgconfig' | |
| make[3]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make[2]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make clean | |
| make[2]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| rm -f project reconstruct refine preprocess postprocess autopick particle_polish particle_sort run_ctffind mask_create stack_create image_handler find_tiltpairs | |
| test -z "librelion-1.3.la" || rm -f librelion-1.3.la | |
| rm -f ./so_locations | |
| rm -rf .libs _libs | |
| rm -rf src/.libs src/_libs | |
| rm -rf src/Healpix_2.15a/.libs src/Healpix_2.15a/_libs | |
| rm -f *.o | |
| rm -f src/*.o | |
| rm -f src/*.lo | |
| rm -f src/Healpix_2.15a/*.o | |
| rm -f src/Healpix_2.15a/*.lo | |
| rm -f src/apps/*.o | |
| rm -f *.lo | |
| make[2]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| # ... then add MPI (for relion-bin+mpi) ... | |
| MPICXX=mpicxx.openmpi dh_auto_configure -- --libdir=\${prefix}/lib/x86_64-linux-gnu --enable-mpi --disable-gui | |
| ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --libdir=\${prefix}/lib/x86_64-linux-gnu --enable-mpi --disable-gui | |
| configure: WARNING: unrecognized options: --disable-maintainer-mode | |
| checking for a BSD-compatible install... /usr/bin/install -c | |
| checking whether build environment is sane... yes | |
| checking for a thread-safe mkdir -p... /bin/mkdir -p | |
| checking for gawk... no | |
| checking for mawk... mawk | |
| checking whether make sets $(MAKE)... yes | |
| checking whether make supports nested variables... yes | |
| checking for gcc... gcc | |
| checking whether the C compiler works... yes | |
| checking for C compiler default output file name... a.out | |
| checking for suffix of executables... | |
| checking whether we are cross compiling... no | |
| checking for suffix of object files... o | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether gcc accepts -g... yes | |
| checking for gcc option to accept ISO C89... none needed | |
| checking whether gcc understands -c and -o together... yes | |
| checking for style of include used by make... GNU | |
| checking dependency style of gcc... none | |
| checking for g++... g++ | |
| checking whether we are using the GNU C++ compiler... yes | |
| checking whether g++ accepts -g... yes | |
| checking dependency style of g++... none | |
| checking build system type... x86_64-pc-linux-gnu | |
| checking host system type... x86_64-pc-linux-gnu | |
| checking how to print strings... printf | |
| checking for a sed that does not truncate output... /bin/sed | |
| checking for grep that handles long lines and -e... /bin/grep | |
| checking for egrep... /bin/grep -E | |
| checking for fgrep... /bin/grep -F | |
| checking for ld used by gcc... /usr/bin/ld | |
| checking if the linker (/usr/bin/ld) is GNU ld... yes | |
| checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B | |
| checking the name lister (/usr/bin/nm -B) interface... BSD nm | |
| checking whether ln -s works... yes | |
| checking the maximum length of command line arguments... 1572864 | |
| checking whether the shell understands some XSI constructs... yes | |
| checking whether the shell understands "+="... yes | |
| checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop | |
| checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop | |
| checking for /usr/bin/ld option to reload object files... -r | |
| checking for objdump... objdump | |
| checking how to recognize dependent libraries... pass_all | |
| checking for dlltool... no | |
| checking how to associate runtime and link libraries... printf %s\n | |
| checking for ar... ar | |
| checking for archiver @FILE support... @ | |
| checking for strip... strip | |
| checking for ranlib... ranlib | |
| checking command to parse /usr/bin/nm -B output from gcc object... ok | |
| checking for sysroot... no | |
| checking for mt... no | |
| checking if : is a manifest tool... no | |
| checking how to run the C preprocessor... gcc -E | |
| checking for ANSI C header files... yes | |
| checking for sys/types.h... yes | |
| checking for sys/stat.h... yes | |
| checking for stdlib.h... yes | |
| checking for string.h... yes | |
| checking for memory.h... yes | |
| checking for strings.h... yes | |
| checking for inttypes.h... yes | |
| checking for stdint.h... yes | |
| checking for unistd.h... yes | |
| checking for dlfcn.h... yes | |
| checking for objdir... .libs | |
| checking if gcc supports -fno-rtti -fno-exceptions... no | |
| checking for gcc option to produce PIC... -fPIC -DPIC | |
| checking if gcc PIC flag -fPIC -DPIC works... yes | |
| checking if gcc static flag -static works... yes | |
| checking if gcc supports -c -o file.o... yes | |
| checking if gcc supports -c -o file.o... (cached) yes | |
| checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking whether -lc should be explicitly linked in... no | |
| checking dynamic linker characteristics... GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking whether stripping libraries is possible... yes | |
| checking if libtool supports shared libraries... yes | |
| checking whether to build shared libraries... yes | |
| checking whether to build static libraries... yes | |
| checking how to run the C++ preprocessor... g++ -E | |
| checking for ld used by g++... /usr/bin/ld -m elf_x86_64 | |
| checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes | |
| checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking for g++ option to produce PIC... -fPIC -DPIC | |
| checking if g++ PIC flag -fPIC -DPIC works... yes | |
| checking if g++ static flag -static works... yes | |
| checking if g++ supports -c -o file.o... yes | |
| checking if g++ supports -c -o file.o... (cached) yes | |
| checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking dynamic linker characteristics... (cached) GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking for mpic++... mpicxx.openmpi | |
| checking for fftw3.h... yes | |
| checking for main in -lfftw3... yes | |
| checking for fftw_plan_with_nthreads in -lfftw3_threads... yes | |
| checking that generated files are newer than configure... done | |
| configure: creating ./config.status | |
| config.status: creating Makefile | |
| config.status: creating relion-1.3.pc | |
| config.status: creating config.h | |
| config.status: executing depfiles commands | |
| config.status: executing libtool commands | |
| configure: WARNING: unrecognized options: --disable-maintainer-mode | |
| make ; make install prefix=/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr | |
| make[2]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make all-am | |
| make[3]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/args.lo src/args.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/args.cpp -fPIC -DPIC -o src/.libs/args.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/args.cpp -o src/args.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/assembly.lo src/assembly.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/assembly.cpp -fPIC -DPIC -o src/.libs/assembly.o | |
| src/assembly.cpp: In member function 'void Assembly::writePDB(std::__cxx11::string)': | |
| src/assembly.cpp:363:61: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] | |
| molecules[imol].name.c_str()); | |
| ^ | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/assembly.cpp -o src/assembly.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/autopicker.lo src/autopicker.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/autopicker.cpp -fPIC -DPIC -o src/.libs/autopicker.o | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/strings.h:53, | |
| from ./src/filename.h:65, | |
| from ./src/image.h:59, | |
| from ./src/autopicker.h:10, | |
| from src/autopicker.cpp:20: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/autopicker.cpp -o src/autopicker.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/backprojector.lo src/backprojector.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/backprojector.cpp -fPIC -DPIC -o src/.libs/backprojector.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/backprojector.cpp -o src/backprojector.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/complex.lo src/complex.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/complex.cpp -fPIC -DPIC -o src/.libs/complex.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/complex.cpp -o src/complex.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ctf.lo src/ctf.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctf.cpp -fPIC -DPIC -o src/.libs/ctf.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctf.cpp -o src/ctf.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ctffind_runner.lo src/ctffind_runner.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctffind_runner.cpp -fPIC -DPIC -o src/.libs/ctffind_runner.o | |
| src/ctffind_runner.cpp: In member function 'void CtffindRunner::executeCtffind3(FileName)': | |
| src/ctffind_runner.cpp:237:28: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result] | |
| system ( fn_cmnd.c_str() ); | |
| ^ | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/args.h:54, | |
| from ./src/metadata_table.h:60, | |
| from ./src/ctffind_runner.h:29, | |
| from src/ctffind_runner.cpp:20: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctffind_runner.cpp -o src/ctffind_runner.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/error.lo src/error.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/error.cpp -fPIC -DPIC -o src/.libs/error.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/error.cpp -o src/error.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/euler.lo src/euler.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/euler.cpp -fPIC -DPIC -o src/.libs/euler.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/euler.cpp -o src/euler.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/exp_model.lo src/exp_model.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/exp_model.cpp -fPIC -DPIC -o src/.libs/exp_model.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/exp_model.cpp -o src/exp_model.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/fftw.lo src/fftw.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/fftw.cpp -fPIC -DPIC -o src/.libs/fftw.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/fftw.cpp -o src/fftw.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/filename.lo src/filename.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/filename.cpp -fPIC -DPIC -o src/.libs/filename.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/filename.cpp -o src/filename.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/funcs.lo src/funcs.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/funcs.cpp -fPIC -DPIC -o src/.libs/funcs.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/funcs.cpp -o src/funcs.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/healpix_sampling.lo src/healpix_sampling.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/healpix_sampling.cpp -fPIC -DPIC -o src/.libs/healpix_sampling.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/healpix_sampling.cpp -o src/healpix_sampling.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/image.lo src/image.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/image.cpp -fPIC -DPIC -o src/.libs/image.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/image.cpp -o src/image.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/mask.lo src/mask.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/mask.cpp -fPIC -DPIC -o src/.libs/mask.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/mask.cpp -o src/mask.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/matrix1d.lo src/matrix1d.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/matrix1d.cpp -fPIC -DPIC -o src/.libs/matrix1d.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/matrix1d.cpp -o src/matrix1d.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/matrix2d.lo src/matrix2d.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/matrix2d.cpp -fPIC -DPIC -o src/.libs/matrix2d.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/matrix2d.cpp -o src/matrix2d.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/memory.lo src/memory.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/memory.cpp -fPIC -DPIC -o src/.libs/memory.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/memory.cpp -o src/memory.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/metadata_container.lo src/metadata_container.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_container.cpp -fPIC -DPIC -o src/.libs/metadata_container.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_container.cpp -o src/metadata_container.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/metadata_label.lo src/metadata_label.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_label.cpp -fPIC -DPIC -o src/.libs/metadata_label.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_label.cpp -o src/metadata_label.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/metadata_table.lo src/metadata_table.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_table.cpp -fPIC -DPIC -o src/.libs/metadata_table.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_table.cpp -o src/metadata_table.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ml_model.lo src/ml_model.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_model.cpp -fPIC -DPIC -o src/.libs/ml_model.o | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/args.h:54, | |
| from ./src/multidim_array.h:54, | |
| from ./src/fftw.h:50, | |
| from ./src/projector.h:23, | |
| from ./src/ml_model.h:23, | |
| from src/ml_model.cpp:21: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_model.cpp -o src/ml_model.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ml_optimiser.lo src/ml_optimiser.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_optimiser.cpp -fPIC -DPIC -o src/.libs/ml_optimiser.o | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/args.h:54, | |
| from ./src/multidim_array.h:54, | |
| from ./src/fftw.h:50, | |
| from ./src/projector.h:23, | |
| from ./src/ml_model.h:23, | |
| from ./src/ml_optimiser.h:24, | |
| from src/ml_optimiser.cpp:20: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_optimiser.cpp -o src/ml_optimiser.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/multidim_array.lo src/multidim_array.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/multidim_array.cpp -fPIC -DPIC -o src/.libs/multidim_array.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/multidim_array.cpp -o src/multidim_array.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/numerical_recipes.lo src/numerical_recipes.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/numerical_recipes.cpp -fPIC -DPIC -o src/.libs/numerical_recipes.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/numerical_recipes.cpp -o src/numerical_recipes.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/parallel.lo src/parallel.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/parallel.cpp -fPIC -DPIC -o src/.libs/parallel.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/parallel.cpp -o src/parallel.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/particle_polisher.lo src/particle_polisher.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_polisher.cpp -fPIC -DPIC -o src/.libs/particle_polisher.o | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/strings.h:53, | |
| from ./src/filename.h:65, | |
| from ./src/image.h:59, | |
| from ./src/particle_polisher.h:23, | |
| from src/particle_polisher.cpp:21: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_polisher.cpp -o src/particle_polisher.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/particle_sorter.lo src/particle_sorter.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_sorter.cpp -fPIC -DPIC -o src/.libs/particle_sorter.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_sorter.cpp -o src/particle_sorter.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/postprocessing.lo src/postprocessing.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/postprocessing.cpp -fPIC -DPIC -o src/.libs/postprocessing.o | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/strings.h:53, | |
| from ./src/filename.h:65, | |
| from ./src/image.h:59, | |
| from ./src/postprocessing.h:24, | |
| from src/postprocessing.cpp:21: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/postprocessing.cpp -o src/postprocessing.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/preprocessing.lo src/preprocessing.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/preprocessing.cpp -fPIC -DPIC -o src/.libs/preprocessing.o | |
| src/preprocessing.cpp: In member function 'void Preprocessing::runExtractParticles()': | |
| src/preprocessing.cpp:286:42: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result] | |
| system(("mkdir -p " + fn_dir).c_str()); | |
| ^ | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/strings.h:53, | |
| from ./src/filename.h:65, | |
| from ./src/image.h:59, | |
| from ./src/preprocessing.h:29, | |
| from src/preprocessing.cpp:20: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/preprocessing.cpp -o src/preprocessing.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/projector.lo src/projector.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/projector.cpp -fPIC -DPIC -o src/.libs/projector.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/projector.cpp -o src/projector.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/strings.lo src/strings.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/strings.cpp -fPIC -DPIC -o src/.libs/strings.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/strings.cpp -o src/strings.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/symmetries.lo src/symmetries.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/symmetries.cpp -fPIC -DPIC -o src/.libs/symmetries.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/symmetries.cpp -o src/symmetries.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/tabfuncs.lo src/tabfuncs.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/tabfuncs.cpp -fPIC -DPIC -o src/.libs/tabfuncs.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/tabfuncs.cpp -o src/tabfuncs.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/time.lo src/time.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/time.cpp -fPIC -DPIC -o src/.libs/time.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/time.cpp -o src/time.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/transformations.lo src/transformations.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/transformations.cpp -fPIC -DPIC -o src/.libs/transformations.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/transformations.cpp -o src/transformations.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/Healpix_2.15a/cxxutils.lo src/Healpix_2.15a/cxxutils.cc | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/Healpix_2.15a/cxxutils.cc -fPIC -DPIC -o src/Healpix_2.15a/.libs/cxxutils.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/Healpix_2.15a/cxxutils.cc -o src/Healpix_2.15a/cxxutils.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/Healpix_2.15a/healpix_base.lo src/Healpix_2.15a/healpix_base.cc | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/Healpix_2.15a/healpix_base.cc -fPIC -DPIC -o src/Healpix_2.15a/.libs/healpix_base.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/Healpix_2.15a/healpix_base.cc -o src/Healpix_2.15a/healpix_base.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/mpi.lo src/mpi.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/mpi.cpp -fPIC -DPIC -o src/.libs/mpi.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/mpi.cpp -o src/mpi.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/autopicker_mpi.lo src/autopicker_mpi.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/autopicker_mpi.cpp -fPIC -DPIC -o src/.libs/autopicker_mpi.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/autopicker_mpi.cpp -o src/autopicker_mpi.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ctffind_runner_mpi.lo src/ctffind_runner_mpi.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctffind_runner_mpi.cpp -fPIC -DPIC -o src/.libs/ctffind_runner_mpi.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctffind_runner_mpi.cpp -o src/ctffind_runner_mpi.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/particle_polisher_mpi.lo src/particle_polisher_mpi.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_polisher_mpi.cpp -fPIC -DPIC -o src/.libs/particle_polisher_mpi.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_polisher_mpi.cpp -o src/particle_polisher_mpi.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/particle_sorter_mpi.lo src/particle_sorter_mpi.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_sorter_mpi.cpp -fPIC -DPIC -o src/.libs/particle_sorter_mpi.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_sorter_mpi.cpp -o src/particle_sorter_mpi.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/preprocessing_mpi.lo src/preprocessing_mpi.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/preprocessing_mpi.cpp -fPIC -DPIC -o src/.libs/preprocessing_mpi.o | |
| src/preprocessing_mpi.cpp: In member function 'void PreprocessingMpi::runExtractParticles()': | |
| src/preprocessing_mpi.cpp:58:31: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result] | |
| system("mkdir -p Particles"); | |
| ^ | |
| src/preprocessing_mpi.cpp:68:42: warning: ignoring return value of 'int system(const char*)', declared with attribute warn_unused_result [-Wunused-result] | |
| system(("mkdir -p " + fn_dir).c_str()); | |
| ^ | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/preprocessing_mpi.cpp -o src/preprocessing_mpi.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ml_optimiser_mpi.lo src/ml_optimiser_mpi.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_optimiser_mpi.cpp -fPIC -DPIC -o src/.libs/ml_optimiser_mpi.o | |
| In file included from /usr/include/string.h:640:0, | |
| from /usr/lib/openmpi/include/openmpi/ompi/mpi/cxx/functions_inln.h:22, | |
| from /usr/lib/openmpi/include/openmpi/ompi/mpi/cxx/mpicxx.h:289, | |
| from /usr/lib/openmpi/include/mpi.h:2087, | |
| from src/ml_optimiser_mpi.cpp:20: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_optimiser_mpi.cpp -o src/ml_optimiser_mpi.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -version-info 1:3:0 -Wl,-z,relro -o librelion-1.3.la -rpath /usr/lib/x86_64-linux-gnu src/args.lo src/assembly.lo src/autopicker.lo src/backprojector.lo src/complex.lo src/ctf.lo src/ctffind_runner.lo src/error.lo src/euler.lo src/exp_model.lo src/fftw.lo src/filename.lo src/funcs.lo src/healpix_sampling.lo src/image.lo src/mask.lo src/matrix1d.lo src/matrix2d.lo src/memory.lo src/metadata_container.lo src/metadata_label.lo src/metadata_table.lo src/ml_model.lo src/ml_optimiser.lo src/multidim_array.lo src/numerical_recipes.lo src/parallel.lo src/particle_polisher.lo src/particle_sorter.lo src/postprocessing.lo src/preprocessing.lo src/projector.lo src/strings.lo src/symmetries.lo src/tabfuncs.lo src/time.lo src/transformations.lo src/Healpix_2.15a/cxxutils.lo src/Healpix_2.15a/healpix_base.lo src/mpi.lo src/autopicker_mpi.lo src/ctffind_runner_mpi.lo src/particle_polisher_mpi.lo src/particle_sorter_mpi.lo src/preprocessing_mpi.lo src/ml_optimiser_mpi.lo -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/5/crtbeginS.o src/.libs/args.o src/.libs/assembly.o src/.libs/autopicker.o src/.libs/backprojector.o src/.libs/complex.o src/.libs/ctf.o src/.libs/ctffind_runner.o src/.libs/error.o src/.libs/euler.o src/.libs/exp_model.o src/.libs/fftw.o src/.libs/filename.o src/.libs/funcs.o src/.libs/healpix_sampling.o src/.libs/image.o src/.libs/mask.o src/.libs/matrix1d.o src/.libs/matrix2d.o src/.libs/memory.o src/.libs/metadata_container.o src/.libs/metadata_label.o src/.libs/metadata_table.o src/.libs/ml_model.o src/.libs/ml_optimiser.o src/.libs/multidim_array.o src/.libs/numerical_recipes.o src/.libs/parallel.o src/.libs/particle_polisher.o src/.libs/particle_sorter.o src/.libs/postprocessing.o src/.libs/preprocessing.o src/.libs/projector.o src/.libs/strings.o src/.libs/symmetries.o src/.libs/tabfuncs.o src/.libs/time.o src/.libs/transformations.o src/Healpix_2.15a/.libs/cxxutils.o src/Healpix_2.15a/.libs/healpix_base.o src/.libs/mpi.o src/.libs/autopicker_mpi.o src/.libs/ctffind_runner_mpi.o src/.libs/particle_polisher_mpi.o src/.libs/particle_sorter_mpi.o src/.libs/preprocessing_mpi.o src/.libs/ml_optimiser_mpi.o -lfftw3_threads -lfftw3 -L/usr/lib/gcc/x86_64-linux-gnu/5 -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/5/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu/crtn.o -O2 -Wl,-z -Wl,relro -Wl,-soname -Wl,librelion-1.3.so.1 -o .libs/librelion-1.3.so.1.0.3 | |
| libtool: link: (cd ".libs" && rm -f "librelion-1.3.so.1" && ln -s "librelion-1.3.so.1.0.3" "librelion-1.3.so.1") | |
| libtool: link: (cd ".libs" && rm -f "librelion-1.3.so" && ln -s "librelion-1.3.so.1.0.3" "librelion-1.3.so") | |
| libtool: link: ar cru .libs/librelion-1.3.a src/args.o src/assembly.o src/autopicker.o src/backprojector.o src/complex.o src/ctf.o src/ctffind_runner.o src/error.o src/euler.o src/exp_model.o src/fftw.o src/filename.o src/funcs.o src/healpix_sampling.o src/image.o src/mask.o src/matrix1d.o src/matrix2d.o src/memory.o src/metadata_container.o src/metadata_label.o src/metadata_table.o src/ml_model.o src/ml_optimiser.o src/multidim_array.o src/numerical_recipes.o src/parallel.o src/particle_polisher.o src/particle_sorter.o src/postprocessing.o src/preprocessing.o src/projector.o src/strings.o src/symmetries.o src/tabfuncs.o src/time.o src/transformations.o src/Healpix_2.15a/cxxutils.o src/Healpix_2.15a/healpix_base.o src/mpi.o src/autopicker_mpi.o src/ctffind_runner_mpi.o src/particle_polisher_mpi.o src/particle_sorter_mpi.o src/preprocessing_mpi.o src/ml_optimiser_mpi.o | |
| ar: `u' modifier ignored since `D' is the default (see `U') | |
| libtool: link: ranlib .libs/librelion-1.3.a | |
| libtool: link: ( cd ".libs" && rm -f "librelion-1.3.la" && ln -s "../librelion-1.3.la" "librelion-1.3.la" ) | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/project.o src/apps/project.cpp | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/args.h:54, | |
| from ./src/multidim_array.h:54, | |
| from ./src/fftw.h:50, | |
| from ./src/projector.h:23, | |
| from src/apps/project.cpp:21: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o project src/apps/project.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/project src/apps/project.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/reconstruct.o src/apps/reconstruct.cpp | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/args.h:54, | |
| from ./src/multidim_array.h:54, | |
| from ./src/fftw.h:50, | |
| from ./src/projector.h:23, | |
| from ./src/backprojector.h:31, | |
| from src/apps/reconstruct.cpp:21: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o reconstruct src/apps/reconstruct.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/reconstruct src/apps/reconstruct.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/refine.o src/apps/refine.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o refine src/apps/refine.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/refine src/apps/refine.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/preprocess.o src/apps/preprocess.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o preprocess src/apps/preprocess.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/preprocess src/apps/preprocess.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/postprocess.o src/apps/postprocess.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o postprocess src/apps/postprocess.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/postprocess src/apps/postprocess.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/autopick.o src/apps/autopick.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o autopick src/apps/autopick.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/autopick src/apps/autopick.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/particle_polish.o src/apps/particle_polish.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o particle_polish src/apps/particle_polish.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/particle_polish src/apps/particle_polish.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/particle_sort.o src/apps/particle_sort.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o particle_sort src/apps/particle_sort.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/particle_sort src/apps/particle_sort.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/run_ctffind.o src/apps/run_ctffind.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o run_ctffind src/apps/run_ctffind.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/run_ctffind src/apps/run_ctffind.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/refine_mpi.o src/apps/refine_mpi.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o refine_mpi src/apps/refine_mpi.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/refine_mpi src/apps/refine_mpi.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/preprocess_mpi.o src/apps/preprocess_mpi.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o preprocess_mpi src/apps/preprocess_mpi.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/preprocess_mpi src/apps/preprocess_mpi.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/autopick_mpi.o src/apps/autopick_mpi.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o autopick_mpi src/apps/autopick_mpi.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/autopick_mpi src/apps/autopick_mpi.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/particle_polish_mpi.o src/apps/particle_polish_mpi.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o particle_polish_mpi src/apps/particle_polish_mpi.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/particle_polish_mpi src/apps/particle_polish_mpi.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/particle_sort_mpi.o src/apps/particle_sort_mpi.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o particle_sort_mpi src/apps/particle_sort_mpi.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/particle_sort_mpi src/apps/particle_sort_mpi.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/run_ctffind_mpi.o src/apps/run_ctffind_mpi.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o run_ctffind_mpi src/apps/run_ctffind_mpi.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/run_ctffind_mpi src/apps/run_ctffind_mpi.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/mask_create.o src/apps/mask_create.cpp | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/strings.h:53, | |
| from ./src/filename.h:65, | |
| from ./src/image.h:59, | |
| from src/apps/mask_create.cpp:21: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o mask_create src/apps/mask_create.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/mask_create src/apps/mask_create.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/stack_create.o src/apps/stack_create.cpp | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/strings.h:53, | |
| from ./src/filename.h:65, | |
| from ./src/image.h:59, | |
| from src/apps/stack_create.cpp:21: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o stack_create src/apps/stack_create.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/stack_create src/apps/stack_create.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/image_handler.o src/apps/image_handler.cpp | |
| In file included from /usr/include/string.h:640:0, | |
| from ./src/strings.h:53, | |
| from ./src/filename.h:65, | |
| from ./src/image.h:59, | |
| from src/apps/image_handler.cpp:21: | |
| In function 'char* strcpy(char*, const char*)', | |
| inlined from 'int Image<T>::writeIMAGIC(long int, int) [with T = double]' at ./src/rwIMAGIC.h:269:9: | |
| /usr/include/x86_64-linux-gnu/bits/string3.h:104:63: warning: call to void* __builtin___memcpy_chk(void*, const void*, long unsigned int, long unsigned int) will always overflow destination buffer | |
| return __builtin___strcpy_chk (__dest, __src, __bos (__dest)); | |
| ^ | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o image_handler src/apps/image_handler.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/image_handler src/apps/image_handler.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -D_FORTIFY_SOURCE=2 -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/find_tiltpairs.o src/apps/find_tiltpairs.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z,relro -o find_tiltpairs src/apps/find_tiltpairs.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -Wl,-z -Wl,relro -o .libs/find_tiltpairs src/apps/find_tiltpairs.o ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| make[3]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make[2]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make[2]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make[3]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/lib/x86_64-linux-gnu' | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c librelion-1.3.la '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/librelion-1.3.so.1.0.3 /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 | |
| libtool: install: (cd /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/lib/x86_64-linux-gnu && { ln -s -f librelion-1.3.so.1.0.3 librelion-1.3.so.1 || { rm -f librelion-1.3.so.1 && ln -s librelion-1.3.so.1.0.3 librelion-1.3.so.1; }; }) | |
| libtool: install: (cd /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/lib/x86_64-linux-gnu && { ln -s -f librelion-1.3.so.1.0.3 librelion-1.3.so || { rm -f librelion-1.3.so && ln -s librelion-1.3.so.1.0.3 librelion-1.3.so; }; }) | |
| libtool: install: /usr/bin/install -c .libs/librelion-1.3.lai /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/lib/x86_64-linux-gnu/librelion-1.3.la | |
| libtool: install: /usr/bin/install -c .libs/librelion-1.3.a /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/lib/x86_64-linux-gnu/librelion-1.3.a | |
| libtool: install: chmod 644 /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/lib/x86_64-linux-gnu/librelion-1.3.a | |
| libtool: install: ranlib /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/lib/x86_64-linux-gnu/librelion-1.3.a | |
| libtool: install: warning: remember to run `libtool --finish /usr/lib/x86_64-linux-gnu' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin' | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c project '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_project' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/project /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_project | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c reconstruct '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_reconstruct' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/reconstruct /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_reconstruct | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c refine '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_refine' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/refine /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_refine | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c preprocess '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_preprocess' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/preprocess /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_preprocess | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c postprocess '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_postprocess' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/postprocess /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_postprocess | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c autopick '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_autopick' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/autopick /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_autopick | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c particle_polish '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_particle_polish' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/particle_polish /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_particle_polish | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c particle_sort '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_particle_sort' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/particle_sort /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_particle_sort | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c run_ctffind '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_run_ctffind' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/run_ctffind /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_run_ctffind | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c refine_mpi '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_refine_mpi' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/refine_mpi /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_refine_mpi | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c preprocess_mpi '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_preprocess_mpi' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/preprocess_mpi /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_preprocess_mpi | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c autopick_mpi '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_autopick_mpi' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/autopick_mpi /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_autopick_mpi | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c particle_polish_mpi '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_particle_polish_mpi' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/particle_polish_mpi /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_particle_polish_mpi | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c particle_sort_mpi '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_particle_sort_mpi' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/particle_sort_mpi /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_particle_sort_mpi | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c run_ctffind_mpi '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_run_ctffind_mpi' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/run_ctffind_mpi /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_run_ctffind_mpi | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c mask_create '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_mask_create' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/mask_create /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_mask_create | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c stack_create '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_stack_create' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/stack_create /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_stack_create | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c image_handler '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_image_handler' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/image_handler /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_image_handler | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c find_tiltpairs '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_find_tiltpairs' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/find_tiltpairs /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_find_tiltpairs | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin' | |
| /usr/bin/install -c scripts/star_datablock_ctfdat '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_star_datablock_ctfdat' | |
| /usr/bin/install -c scripts/star_datablock_stack '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_star_datablock_stack' | |
| /usr/bin/install -c scripts/star_datablock_singlefiles '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_star_datablock_singlefiles' | |
| /usr/bin/install -c scripts/star_loopheader '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_star_loopheader' | |
| /usr/bin/install -c scripts/star_plottable '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_star_plottable' | |
| /usr/bin/install -c scripts/star_printtable '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_star_printtable' | |
| /usr/bin/install -c scripts/qsub.csh '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/bin/./relion_qsub.csh' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/include/relion-1.3' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/include/relion-1.3/src' | |
| /usr/bin/install -c -m 644 src/args.h src/assembly.h src/autopicker.h src/backprojector.h src/complex.h src/ctf.h src/ctffind_runner.h src/displayer.h src/error.h src/euler.h src/exp_model.h src/fftw.h src/filename.h src/funcs.h src/gcc_version.h src/gui_entries.h src/gui_jobwindow.h src/gui_mainwindow.h src/healpix_sampling.h src/image.h src/macros.h src/mask.h src/matrix1d.h src/matrix2d.h src/memory.h src/metadata_container.h src/metadata_label.h src/metadata_table.h src/ml_model.h src/ml_optimiser.h src/multidim_array.h src/numerical_recipes.h src/parallel.h src/particle_polisher.h src/particle_sorter.h src/postprocessing.h src/preprocessing.h src/projector.h src/rwIMAGIC.h src/rwMRC.h '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/include/relion-1.3/src' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/include/relion-1.3/src' | |
| /usr/bin/install -c -m 644 src/rwSPIDER.h src/strings.h src/symmetries.h src/tabfuncs.h src/time.h src/transformations.h src/mpi.h src/autopicker_mpi.h src/ctffind_runner_mpi.h src/particle_polisher_mpi.h src/particle_sorter_mpi.h src/preprocessing_mpi.h src/ml_optimiser_mpi.h '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/include/relion-1.3/src' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/include/relion-1.3/src/Healpix_2.15a' | |
| /usr/bin/install -c -m 644 src/Healpix_2.15a/arr.h src/Healpix_2.15a/cxxutils.h src/Healpix_2.15a/datatypes.h src/Healpix_2.15a/geom_utils.h src/Healpix_2.15a/lsconstants.h src/Healpix_2.15a/message_error.h src/Healpix_2.15a/openmp_support.h src/Healpix_2.15a/pointing.h src/Healpix_2.15a/vec3.h src/Healpix_2.15a/healpix_base.h '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/include/relion-1.3/src/Healpix_2.15a' | |
| /usr/bin/install -c -m 644 relion.h '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/include/relion-1.3/.' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/lib/x86_64-linux-gnu/pkgconfig' | |
| /usr/bin/install -c -m 644 relion-1.3.pc '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi/usr/lib/x86_64-linux-gnu/pkgconfig' | |
| make[3]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make[2]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make clean | |
| make[2]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| rm -f project reconstruct refine preprocess postprocess autopick particle_polish particle_sort run_ctffind refine_mpi preprocess_mpi autopick_mpi particle_polish_mpi particle_sort_mpi run_ctffind_mpi mask_create stack_create image_handler find_tiltpairs | |
| test -z "librelion-1.3.la" || rm -f librelion-1.3.la | |
| rm -f ./so_locations | |
| rm -rf .libs _libs | |
| rm -rf src/.libs src/_libs | |
| rm -rf src/Healpix_2.15a/.libs src/Healpix_2.15a/_libs | |
| rm -f *.o | |
| rm -f src/*.o | |
| rm -f src/*.lo | |
| rm -f src/Healpix_2.15a/*.o | |
| rm -f src/Healpix_2.15a/*.lo | |
| rm -f src/apps/*.o | |
| rm -f *.lo | |
| make[2]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| # ... then add GUI (for relion-bin+gui) ... | |
| dh_auto_configure -- --libdir=\${prefix}/lib/x86_64-linux-gnu --enable-gui \ | |
| CPPFLAGS="$(fltk-config --cxxflags)" \ | |
| LDFLAGS="$(fltk-config --ldflags)" | |
| ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --libdir=\${prefix}/lib/x86_64-linux-gnu --enable-gui "CPPFLAGS= -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT" "LDFLAGS=-lfltk -lX11" | |
| configure: WARNING: unrecognized options: --disable-maintainer-mode | |
| checking for a BSD-compatible install... /usr/bin/install -c | |
| checking whether build environment is sane... yes | |
| checking for a thread-safe mkdir -p... /bin/mkdir -p | |
| checking for gawk... no | |
| checking for mawk... mawk | |
| checking whether make sets $(MAKE)... yes | |
| checking whether make supports nested variables... yes | |
| checking for gcc... gcc | |
| checking whether the C compiler works... yes | |
| checking for C compiler default output file name... a.out | |
| checking for suffix of executables... | |
| checking whether we are cross compiling... no | |
| checking for suffix of object files... o | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether gcc accepts -g... yes | |
| checking for gcc option to accept ISO C89... none needed | |
| checking whether gcc understands -c and -o together... yes | |
| checking for style of include used by make... GNU | |
| checking dependency style of gcc... none | |
| checking for g++... g++ | |
| checking whether we are using the GNU C++ compiler... yes | |
| checking whether g++ accepts -g... yes | |
| checking dependency style of g++... none | |
| checking build system type... x86_64-pc-linux-gnu | |
| checking host system type... x86_64-pc-linux-gnu | |
| checking how to print strings... printf | |
| checking for a sed that does not truncate output... /bin/sed | |
| checking for grep that handles long lines and -e... /bin/grep | |
| checking for egrep... /bin/grep -E | |
| checking for fgrep... /bin/grep -F | |
| checking for ld used by gcc... /usr/bin/ld | |
| checking if the linker (/usr/bin/ld) is GNU ld... yes | |
| checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B | |
| checking the name lister (/usr/bin/nm -B) interface... BSD nm | |
| checking whether ln -s works... yes | |
| checking the maximum length of command line arguments... 1572864 | |
| checking whether the shell understands some XSI constructs... yes | |
| checking whether the shell understands "+="... yes | |
| checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop | |
| checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop | |
| checking for /usr/bin/ld option to reload object files... -r | |
| checking for objdump... objdump | |
| checking how to recognize dependent libraries... pass_all | |
| checking for dlltool... no | |
| checking how to associate runtime and link libraries... printf %s\n | |
| checking for ar... ar | |
| checking for archiver @FILE support... @ | |
| checking for strip... strip | |
| checking for ranlib... ranlib | |
| checking command to parse /usr/bin/nm -B output from gcc object... ok | |
| checking for sysroot... no | |
| checking for mt... no | |
| checking if : is a manifest tool... no | |
| checking how to run the C preprocessor... gcc -E | |
| checking for ANSI C header files... yes | |
| checking for sys/types.h... yes | |
| checking for sys/stat.h... yes | |
| checking for stdlib.h... yes | |
| checking for string.h... yes | |
| checking for memory.h... yes | |
| checking for strings.h... yes | |
| checking for inttypes.h... yes | |
| checking for stdint.h... yes | |
| checking for unistd.h... yes | |
| checking for dlfcn.h... yes | |
| checking for objdir... .libs | |
| checking if gcc supports -fno-rtti -fno-exceptions... no | |
| checking for gcc option to produce PIC... -fPIC -DPIC | |
| checking if gcc PIC flag -fPIC -DPIC works... yes | |
| checking if gcc static flag -static works... yes | |
| checking if gcc supports -c -o file.o... yes | |
| checking if gcc supports -c -o file.o... (cached) yes | |
| checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking whether -lc should be explicitly linked in... no | |
| checking dynamic linker characteristics... GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking whether stripping libraries is possible... yes | |
| checking if libtool supports shared libraries... yes | |
| checking whether to build shared libraries... yes | |
| checking whether to build static libraries... yes | |
| checking how to run the C++ preprocessor... g++ -E | |
| checking for ld used by g++... /usr/bin/ld -m elf_x86_64 | |
| checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes | |
| checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking for g++ option to produce PIC... -fPIC -DPIC | |
| checking if g++ PIC flag -fPIC -DPIC works... yes | |
| checking if g++ static flag -static works... yes | |
| checking if g++ supports -c -o file.o... yes | |
| checking if g++ supports -c -o file.o... (cached) yes | |
| checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking dynamic linker characteristics... (cached) GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking for fftw3.h... yes | |
| checking for main in -lfftw3... yes | |
| checking for fftw_plan_with_nthreads in -lfftw3_threads... yes | |
| checking for /usr/bin/fltk-config... yes | |
| checking that generated files are newer than configure... done | |
| configure: creating ./config.status | |
| config.status: creating Makefile | |
| config.status: creating relion-1.3.pc | |
| config.status: creating config.h | |
| config.status: executing depfiles commands | |
| config.status: executing libtool commands | |
| configure: WARNING: unrecognized options: --disable-maintainer-mode | |
| make ; make install prefix=/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr | |
| make[2]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make all-am | |
| make[3]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/args.lo src/args.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/args.cpp -fPIC -DPIC -o src/.libs/args.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/args.cpp -o src/args.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/assembly.lo src/assembly.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/assembly.cpp -fPIC -DPIC -o src/.libs/assembly.o | |
| src/assembly.cpp: In member function 'void Assembly::writePDB(std::__cxx11::string)': | |
| src/assembly.cpp:363:61: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] | |
| molecules[imol].name.c_str()); | |
| ^ | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/assembly.cpp -o src/assembly.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/autopicker.lo src/autopicker.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/autopicker.cpp -fPIC -DPIC -o src/.libs/autopicker.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/autopicker.cpp -o src/autopicker.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/backprojector.lo src/backprojector.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/backprojector.cpp -fPIC -DPIC -o src/.libs/backprojector.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/backprojector.cpp -o src/backprojector.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/complex.lo src/complex.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/complex.cpp -fPIC -DPIC -o src/.libs/complex.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/complex.cpp -o src/complex.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ctf.lo src/ctf.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctf.cpp -fPIC -DPIC -o src/.libs/ctf.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctf.cpp -o src/ctf.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ctffind_runner.lo src/ctffind_runner.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctffind_runner.cpp -fPIC -DPIC -o src/.libs/ctffind_runner.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctffind_runner.cpp -o src/ctffind_runner.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/error.lo src/error.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/error.cpp -fPIC -DPIC -o src/.libs/error.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/error.cpp -o src/error.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/euler.cpp -fPIC -DPIC -o src/.libs/euler.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/euler.cpp -o src/euler.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/exp_model.cpp -fPIC -DPIC -o src/.libs/exp_model.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/exp_model.cpp -o src/exp_model.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/fftw.cpp -fPIC -DPIC -o src/.libs/fftw.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/fftw.cpp -o src/fftw.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/filename.cpp -fPIC -DPIC -o src/.libs/filename.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/filename.cpp -o src/filename.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/funcs.cpp -fPIC -DPIC -o src/.libs/funcs.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/funcs.cpp -o src/funcs.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/healpix_sampling.cpp -fPIC -DPIC -o src/.libs/healpix_sampling.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/healpix_sampling.cpp -o src/healpix_sampling.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/image.cpp -fPIC -DPIC -o src/.libs/image.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/image.cpp -o src/image.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/mask.cpp -fPIC -DPIC -o src/.libs/mask.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/mask.cpp -o src/mask.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/matrix1d.cpp -fPIC -DPIC -o src/.libs/matrix1d.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/matrix1d.cpp -o src/matrix1d.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/matrix2d.cpp -fPIC -DPIC -o src/.libs/matrix2d.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/matrix2d.cpp -o src/matrix2d.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/memory.cpp -fPIC -DPIC -o src/.libs/memory.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/memory.cpp -o src/memory.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_container.cpp -fPIC -DPIC -o src/.libs/metadata_container.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_container.cpp -o src/metadata_container.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_label.cpp -fPIC -DPIC -o src/.libs/metadata_label.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_label.cpp -o src/metadata_label.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_table.cpp -fPIC -DPIC -o src/.libs/metadata_table.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_table.cpp -o src/metadata_table.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_model.cpp -fPIC -DPIC -o src/.libs/ml_model.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_model.cpp -o src/ml_model.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_optimiser.cpp -fPIC -DPIC -o src/.libs/ml_optimiser.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_optimiser.cpp -o src/ml_optimiser.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/multidim_array.cpp -fPIC -DPIC -o src/.libs/multidim_array.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/multidim_array.cpp -o src/multidim_array.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/numerical_recipes.cpp -fPIC -DPIC -o src/.libs/numerical_recipes.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/numerical_recipes.cpp -o src/numerical_recipes.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/parallel.cpp -o src/parallel.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_polisher.cpp -fPIC -DPIC -o src/.libs/particle_polisher.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_polisher.cpp -o src/particle_polisher.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_sorter.cpp -fPIC -DPIC -o src/.libs/particle_sorter.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_sorter.cpp -o src/particle_sorter.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/postprocessing.cpp -fPIC -DPIC -o src/.libs/postprocessing.o | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/preprocessing.cpp -fPIC -DPIC -o src/.libs/preprocessing.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/preprocessing.cpp -o src/preprocessing.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/projector.cpp -fPIC -DPIC -o src/.libs/projector.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/projector.cpp -o src/projector.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/strings.cpp -fPIC -DPIC -o src/.libs/strings.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/strings.cpp -o src/strings.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/symmetries.cpp -fPIC -DPIC -o src/.libs/symmetries.o | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/transformations.cpp -fPIC -DPIC -o src/.libs/transformations.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/transformations.cpp -o src/transformations.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/Healpix_2.15a/cxxutils.cc -fPIC -DPIC -o src/Healpix_2.15a/.libs/cxxutils.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/Healpix_2.15a/cxxutils.cc -o src/Healpix_2.15a/cxxutils.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/Healpix_2.15a/healpix_base.cc -fPIC -DPIC -o src/Healpix_2.15a/.libs/healpix_base.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/Healpix_2.15a/healpix_base.cc -o src/Healpix_2.15a/healpix_base.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/displayer.cpp -fPIC -DPIC -o src/.libs/displayer.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/displayer.cpp -o src/displayer.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/gui_entries.cpp -fPIC -DPIC -o src/.libs/gui_entries.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/gui_entries.cpp -o src/gui_entries.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/gui_jobwindow.cpp -fPIC -DPIC -o src/.libs/gui_jobwindow.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/gui_jobwindow.cpp -o src/gui_jobwindow.o >/dev/null 2>&1 | |
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| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/gui_mainwindow.cpp -fPIC -DPIC -o src/.libs/gui_mainwindow.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/gui_mainwindow.cpp -o src/gui_mainwindow.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/manualpicker.lo src/manualpicker.cpp | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/manualpicker.cpp -fPIC -DPIC -o src/.libs/manualpicker.o | |
| libtool: compile: g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/manualpicker.cpp -o src/manualpicker.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -version-info 1:3:0 -lfltk -lX11 -o librelion-1.3.la -rpath /usr/lib/x86_64-linux-gnu src/args.lo src/assembly.lo src/autopicker.lo src/backprojector.lo src/complex.lo src/ctf.lo src/ctffind_runner.lo src/error.lo src/euler.lo src/exp_model.lo src/fftw.lo src/filename.lo src/funcs.lo src/healpix_sampling.lo src/image.lo src/mask.lo src/matrix1d.lo src/matrix2d.lo src/memory.lo src/metadata_container.lo src/metadata_label.lo src/metadata_table.lo src/ml_model.lo src/ml_optimiser.lo src/multidim_array.lo src/numerical_recipes.lo src/parallel.lo src/particle_polisher.lo src/particle_sorter.lo src/postprocessing.lo src/preprocessing.lo src/projector.lo src/strings.lo src/symmetries.lo src/tabfuncs.lo src/time.lo src/transformations.lo src/Healpix_2.15a/cxxutils.lo src/Healpix_2.15a/healpix_base.lo src/displayer.lo src/gui_entries.lo src/gui_jobwindow.lo src/gui_mainwindow.lo src/manualpicker.lo -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/5/crtbeginS.o src/.libs/args.o src/.libs/assembly.o src/.libs/autopicker.o src/.libs/backprojector.o src/.libs/complex.o src/.libs/ctf.o src/.libs/ctffind_runner.o src/.libs/error.o src/.libs/euler.o src/.libs/exp_model.o src/.libs/fftw.o src/.libs/filename.o src/.libs/funcs.o src/.libs/healpix_sampling.o src/.libs/image.o src/.libs/mask.o src/.libs/matrix1d.o src/.libs/matrix2d.o src/.libs/memory.o src/.libs/metadata_container.o src/.libs/metadata_label.o src/.libs/metadata_table.o src/.libs/ml_model.o src/.libs/ml_optimiser.o src/.libs/multidim_array.o src/.libs/numerical_recipes.o src/.libs/parallel.o src/.libs/particle_polisher.o src/.libs/particle_sorter.o src/.libs/postprocessing.o src/.libs/preprocessing.o src/.libs/projector.o src/.libs/strings.o src/.libs/symmetries.o src/.libs/tabfuncs.o src/.libs/time.o src/.libs/transformations.o src/Healpix_2.15a/.libs/cxxutils.o src/Healpix_2.15a/.libs/healpix_base.o src/.libs/displayer.o src/.libs/gui_entries.o src/.libs/gui_jobwindow.o src/.libs/gui_mainwindow.o src/.libs/manualpicker.o -lfltk -lX11 -lfftw3_threads -lfftw3 -L/usr/lib/gcc/x86_64-linux-gnu/5 -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/5/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu/crtn.o -O2 -Wl,-soname -Wl,librelion-1.3.so.1 -o .libs/librelion-1.3.so.1.0.3 | |
| libtool: link: (cd ".libs" && rm -f "librelion-1.3.so.1" && ln -s "librelion-1.3.so.1.0.3" "librelion-1.3.so.1") | |
| libtool: link: (cd ".libs" && rm -f "librelion-1.3.so" && ln -s "librelion-1.3.so.1.0.3" "librelion-1.3.so") | |
| libtool: link: ar cru .libs/librelion-1.3.a src/args.o src/assembly.o src/autopicker.o src/backprojector.o src/complex.o src/ctf.o src/ctffind_runner.o src/error.o src/euler.o src/exp_model.o src/fftw.o src/filename.o src/funcs.o src/healpix_sampling.o src/image.o src/mask.o src/matrix1d.o src/matrix2d.o src/memory.o src/metadata_container.o src/metadata_label.o src/metadata_table.o src/ml_model.o src/ml_optimiser.o src/multidim_array.o src/numerical_recipes.o src/parallel.o src/particle_polisher.o src/particle_sorter.o src/postprocessing.o src/preprocessing.o src/projector.o src/strings.o src/symmetries.o src/tabfuncs.o src/time.o src/transformations.o src/Healpix_2.15a/cxxutils.o src/Healpix_2.15a/healpix_base.o src/displayer.o src/gui_entries.o src/gui_jobwindow.o src/gui_mainwindow.o src/manualpicker.o | |
| ar: `u' modifier ignored since `D' is the default (see `U') | |
| libtool: link: ranlib .libs/librelion-1.3.a | |
| libtool: link: ( cd ".libs" && rm -f "librelion-1.3.la" && ln -s "../librelion-1.3.la" "librelion-1.3.la" ) | |
| g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/project.o src/apps/project.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o project src/apps/project.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/project src/apps/project.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/reconstruct.o src/apps/reconstruct.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o reconstruct src/apps/reconstruct.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/reconstruct src/apps/reconstruct.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/refine.o src/apps/refine.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o refine src/apps/refine.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/refine src/apps/refine.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/preprocess.o src/apps/preprocess.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o preprocess src/apps/preprocess.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/preprocess src/apps/preprocess.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/postprocess.o src/apps/postprocess.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o postprocess src/apps/postprocess.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/postprocess src/apps/postprocess.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/autopick.o src/apps/autopick.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o autopick src/apps/autopick.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/autopick src/apps/autopick.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/particle_polish.o src/apps/particle_polish.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o particle_polish src/apps/particle_polish.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/particle_polish src/apps/particle_polish.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/particle_sort.o src/apps/particle_sort.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o particle_sort src/apps/particle_sort.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/particle_sort src/apps/particle_sort.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/run_ctffind.o src/apps/run_ctffind.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o run_ctffind src/apps/run_ctffind.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/run_ctffind src/apps/run_ctffind.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/manualpick.o src/apps/manualpick.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o manualpick src/apps/manualpick.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/manualpick src/apps/manualpick.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/display.o src/apps/display.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o display src/apps/display.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/display src/apps/display.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/maingui.o src/apps/maingui.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o maingui src/apps/maingui.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/maingui src/apps/maingui.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/mask_create.o src/apps/mask_create.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o mask_create src/apps/mask_create.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/mask_create src/apps/mask_create.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/stack_create.o src/apps/stack_create.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o stack_create src/apps/stack_create.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/stack_create src/apps/stack_create.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/image_handler.o src/apps/image_handler.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o image_handler src/apps/image_handler.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/image_handler src/apps/image_handler.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| g++ -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/find_tiltpairs.o src/apps/find_tiltpairs.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o find_tiltpairs src/apps/find_tiltpairs.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/find_tiltpairs src/apps/find_tiltpairs.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| make[3]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make[2]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make[2]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make[3]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/lib/x86_64-linux-gnu' | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c librelion-1.3.la '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/librelion-1.3.so.1.0.3 /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 | |
| libtool: install: (cd /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/lib/x86_64-linux-gnu && { ln -s -f librelion-1.3.so.1.0.3 librelion-1.3.so.1 || { rm -f librelion-1.3.so.1 && ln -s librelion-1.3.so.1.0.3 librelion-1.3.so.1; }; }) | |
| libtool: install: (cd /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/lib/x86_64-linux-gnu && { ln -s -f librelion-1.3.so.1.0.3 librelion-1.3.so || { rm -f librelion-1.3.so && ln -s librelion-1.3.so.1.0.3 librelion-1.3.so; }; }) | |
| libtool: install: /usr/bin/install -c .libs/librelion-1.3.lai /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/lib/x86_64-linux-gnu/librelion-1.3.la | |
| libtool: install: /usr/bin/install -c .libs/librelion-1.3.a /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/lib/x86_64-linux-gnu/librelion-1.3.a | |
| libtool: install: chmod 644 /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/lib/x86_64-linux-gnu/librelion-1.3.a | |
| libtool: install: ranlib /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/lib/x86_64-linux-gnu/librelion-1.3.a | |
| libtool: install: warning: remember to run `libtool --finish /usr/lib/x86_64-linux-gnu' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin' | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c project '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_project' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/project /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_project | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c reconstruct '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_reconstruct' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/reconstruct /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_reconstruct | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c refine '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_refine' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/refine /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_refine | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c preprocess '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_preprocess' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/preprocess /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_preprocess | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c postprocess '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_postprocess' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/postprocess /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_postprocess | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c autopick '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_autopick' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/autopick /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_autopick | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c particle_polish '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_particle_polish' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/particle_polish /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_particle_polish | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c particle_sort '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_particle_sort' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/particle_sort /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_particle_sort | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c run_ctffind '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_run_ctffind' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/run_ctffind /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_run_ctffind | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c manualpick '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_manualpick' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/manualpick /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_manualpick | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c display '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_display' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/display /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_display | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c maingui '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_maingui' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/maingui /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_maingui | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c mask_create '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_mask_create' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/mask_create /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_mask_create | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c stack_create '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_stack_create' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/stack_create /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_stack_create | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c image_handler '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_image_handler' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/image_handler /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_image_handler | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c find_tiltpairs '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_find_tiltpairs' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/find_tiltpairs /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_find_tiltpairs | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin' | |
| /usr/bin/install -c scripts/star_datablock_ctfdat '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_star_datablock_ctfdat' | |
| /usr/bin/install -c scripts/star_datablock_stack '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_star_datablock_stack' | |
| /usr/bin/install -c scripts/star_datablock_singlefiles '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_star_datablock_singlefiles' | |
| /usr/bin/install -c scripts/star_loopheader '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_star_loopheader' | |
| /usr/bin/install -c scripts/star_plottable '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_star_plottable' | |
| /usr/bin/install -c scripts/star_printtable '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_star_printtable' | |
| /usr/bin/install -c scripts/qsub.csh '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/bin/./relion_qsub.csh' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/include/relion-1.3' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/include/relion-1.3/src' | |
| /usr/bin/install -c -m 644 src/args.h src/assembly.h src/autopicker.h src/backprojector.h src/complex.h src/ctf.h src/ctffind_runner.h src/displayer.h src/error.h src/euler.h src/exp_model.h src/fftw.h src/filename.h src/funcs.h src/gcc_version.h src/gui_entries.h src/gui_jobwindow.h src/gui_mainwindow.h src/healpix_sampling.h src/image.h src/macros.h src/mask.h src/matrix1d.h src/matrix2d.h src/memory.h src/metadata_container.h src/metadata_label.h src/metadata_table.h src/ml_model.h src/ml_optimiser.h src/multidim_array.h src/numerical_recipes.h src/parallel.h src/particle_polisher.h src/particle_sorter.h src/postprocessing.h src/preprocessing.h src/projector.h src/rwIMAGIC.h src/rwMRC.h '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/include/relion-1.3/src' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/include/relion-1.3/src' | |
| /usr/bin/install -c -m 644 src/rwSPIDER.h src/strings.h src/symmetries.h src/tabfuncs.h src/time.h src/transformations.h src/displayer.h src/gui_entries.h src/gui_jobwindow.h src/gui_mainwindow.h src/manualpicker.h '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/include/relion-1.3/src' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/include/relion-1.3/src/Healpix_2.15a' | |
| /usr/bin/install -c -m 644 src/Healpix_2.15a/arr.h src/Healpix_2.15a/cxxutils.h src/Healpix_2.15a/datatypes.h src/Healpix_2.15a/geom_utils.h src/Healpix_2.15a/lsconstants.h src/Healpix_2.15a/message_error.h src/Healpix_2.15a/openmp_support.h src/Healpix_2.15a/pointing.h src/Healpix_2.15a/vec3.h src/Healpix_2.15a/healpix_base.h '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/include/relion-1.3/src/Healpix_2.15a' | |
| /usr/bin/install -c -m 644 relion.h '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/include/relion-1.3/.' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/lib/x86_64-linux-gnu/pkgconfig' | |
| /usr/bin/install -c -m 644 relion-1.3.pc '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/gui/usr/lib/x86_64-linux-gnu/pkgconfig' | |
| make[3]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make[2]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make clean | |
| make[2]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| rm -f project reconstruct refine preprocess postprocess autopick particle_polish particle_sort run_ctffind manualpick display maingui mask_create stack_create image_handler find_tiltpairs | |
| test -z "librelion-1.3.la" || rm -f librelion-1.3.la | |
| rm -f ./so_locations | |
| rm -rf .libs _libs | |
| rm -rf src/.libs src/_libs | |
| rm -rf src/Healpix_2.15a/.libs src/Healpix_2.15a/_libs | |
| rm -f *.o | |
| rm -f src/*.o | |
| rm -f src/*.lo | |
| rm -f src/Healpix_2.15a/*.o | |
| rm -f src/Healpix_2.15a/*.lo | |
| rm -f src/apps/*.o | |
| rm -f *.lo | |
| make[2]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| # ... finally add MPI + GUI (for librelion-bin+mpi+gui) | |
| MPICXX=mpicxx.openmpi dh_auto_configure -- --libdir=\${prefix}/lib/x86_64-linux-gnu --enable-mpi --enable-gui \ | |
| CPPFLAGS="$(fltk-config --cxxflags)" \ | |
| LDFLAGS="$(fltk-config --ldflags)" | |
| ./configure --build=x86_64-linux-gnu --prefix=/usr --includedir=\${prefix}/include --mandir=\${prefix}/share/man --infodir=\${prefix}/share/info --sysconfdir=/etc --localstatedir=/var --disable-silent-rules --libdir=\${prefix}/lib/x86_64-linux-gnu --libexecdir=\${prefix}/lib/x86_64-linux-gnu --disable-maintainer-mode --disable-dependency-tracking --libdir=\${prefix}/lib/x86_64-linux-gnu --enable-mpi --enable-gui "CPPFLAGS= -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT" "LDFLAGS=-lfltk -lX11" | |
| configure: WARNING: unrecognized options: --disable-maintainer-mode | |
| checking for a BSD-compatible install... /usr/bin/install -c | |
| checking whether build environment is sane... yes | |
| checking for a thread-safe mkdir -p... /bin/mkdir -p | |
| checking for gawk... no | |
| checking for mawk... mawk | |
| checking whether make sets $(MAKE)... yes | |
| checking whether make supports nested variables... yes | |
| checking for gcc... gcc | |
| checking whether the C compiler works... yes | |
| checking for C compiler default output file name... a.out | |
| checking for suffix of executables... | |
| checking whether we are cross compiling... no | |
| checking for suffix of object files... o | |
| checking whether we are using the GNU C compiler... yes | |
| checking whether gcc accepts -g... yes | |
| checking for gcc option to accept ISO C89... none needed | |
| checking whether gcc understands -c and -o together... yes | |
| checking for style of include used by make... GNU | |
| checking dependency style of gcc... none | |
| checking for g++... g++ | |
| checking whether we are using the GNU C++ compiler... yes | |
| checking whether g++ accepts -g... yes | |
| checking dependency style of g++... none | |
| checking build system type... x86_64-pc-linux-gnu | |
| checking host system type... x86_64-pc-linux-gnu | |
| checking how to print strings... printf | |
| checking for a sed that does not truncate output... /bin/sed | |
| checking for grep that handles long lines and -e... /bin/grep | |
| checking for egrep... /bin/grep -E | |
| checking for fgrep... /bin/grep -F | |
| checking for ld used by gcc... /usr/bin/ld | |
| checking if the linker (/usr/bin/ld) is GNU ld... yes | |
| checking for BSD- or MS-compatible name lister (nm)... /usr/bin/nm -B | |
| checking the name lister (/usr/bin/nm -B) interface... BSD nm | |
| checking whether ln -s works... yes | |
| checking the maximum length of command line arguments... 1572864 | |
| checking whether the shell understands some XSI constructs... yes | |
| checking whether the shell understands "+="... yes | |
| checking how to convert x86_64-pc-linux-gnu file names to x86_64-pc-linux-gnu format... func_convert_file_noop | |
| checking how to convert x86_64-pc-linux-gnu file names to toolchain format... func_convert_file_noop | |
| checking for /usr/bin/ld option to reload object files... -r | |
| checking for objdump... objdump | |
| checking how to recognize dependent libraries... pass_all | |
| checking for dlltool... no | |
| checking how to associate runtime and link libraries... printf %s\n | |
| checking for ar... ar | |
| checking for archiver @FILE support... @ | |
| checking for strip... strip | |
| checking for ranlib... ranlib | |
| checking command to parse /usr/bin/nm -B output from gcc object... ok | |
| checking for sysroot... no | |
| checking for mt... no | |
| checking if : is a manifest tool... no | |
| checking how to run the C preprocessor... gcc -E | |
| checking for ANSI C header files... yes | |
| checking for sys/types.h... yes | |
| checking for sys/stat.h... yes | |
| checking for stdlib.h... yes | |
| checking for string.h... yes | |
| checking for memory.h... yes | |
| checking for strings.h... yes | |
| checking for inttypes.h... yes | |
| checking for stdint.h... yes | |
| checking for unistd.h... yes | |
| checking for dlfcn.h... yes | |
| checking for objdir... .libs | |
| checking if gcc supports -fno-rtti -fno-exceptions... no | |
| checking for gcc option to produce PIC... -fPIC -DPIC | |
| checking if gcc PIC flag -fPIC -DPIC works... yes | |
| checking if gcc static flag -static works... yes | |
| checking if gcc supports -c -o file.o... yes | |
| checking if gcc supports -c -o file.o... (cached) yes | |
| checking whether the gcc linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking whether -lc should be explicitly linked in... no | |
| checking dynamic linker characteristics... GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking whether stripping libraries is possible... yes | |
| checking if libtool supports shared libraries... yes | |
| checking whether to build shared libraries... yes | |
| checking whether to build static libraries... yes | |
| checking how to run the C++ preprocessor... g++ -E | |
| checking for ld used by g++... /usr/bin/ld -m elf_x86_64 | |
| checking if the linker (/usr/bin/ld -m elf_x86_64) is GNU ld... yes | |
| checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking for g++ option to produce PIC... -fPIC -DPIC | |
| checking if g++ PIC flag -fPIC -DPIC works... yes | |
| checking if g++ static flag -static works... yes | |
| checking if g++ supports -c -o file.o... yes | |
| checking if g++ supports -c -o file.o... (cached) yes | |
| checking whether the g++ linker (/usr/bin/ld -m elf_x86_64) supports shared libraries... yes | |
| checking dynamic linker characteristics... (cached) GNU/Linux ld.so | |
| checking how to hardcode library paths into programs... immediate | |
| checking for mpic++... mpicxx.openmpi | |
| checking for fftw3.h... yes | |
| checking for main in -lfftw3... yes | |
| checking for fftw_plan_with_nthreads in -lfftw3_threads... yes | |
| checking for /usr/bin/fltk-config... yes | |
| checking that generated files are newer than configure... done | |
| configure: creating ./config.status | |
| config.status: creating Makefile | |
| config.status: creating relion-1.3.pc | |
| config.status: creating config.h | |
| config.status: executing depfiles commands | |
| config.status: executing libtool commands | |
| configure: WARNING: unrecognized options: --disable-maintainer-mode | |
| make ; make install prefix=/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr | |
| make[2]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make all-am | |
| make[3]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/args.lo src/args.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/args.cpp -fPIC -DPIC -o src/.libs/args.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/args.cpp -o src/args.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/assembly.lo src/assembly.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/assembly.cpp -fPIC -DPIC -o src/.libs/assembly.o | |
| src/assembly.cpp: In member function 'void Assembly::writePDB(std::__cxx11::string)': | |
| src/assembly.cpp:363:61: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] | |
| molecules[imol].name.c_str()); | |
| ^ | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/assembly.cpp -o src/assembly.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/autopicker.lo src/autopicker.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/autopicker.cpp -fPIC -DPIC -o src/.libs/autopicker.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/autopicker.cpp -o src/autopicker.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/backprojector.lo src/backprojector.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/backprojector.cpp -fPIC -DPIC -o src/.libs/backprojector.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/backprojector.cpp -o src/backprojector.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/complex.lo src/complex.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/complex.cpp -fPIC -DPIC -o src/.libs/complex.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/complex.cpp -o src/complex.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ctf.lo src/ctf.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctf.cpp -fPIC -DPIC -o src/.libs/ctf.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctf.cpp -o src/ctf.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ctffind_runner.lo src/ctffind_runner.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctffind_runner.cpp -fPIC -DPIC -o src/.libs/ctffind_runner.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctffind_runner.cpp -o src/ctffind_runner.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/error.lo src/error.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/error.cpp -fPIC -DPIC -o src/.libs/error.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/error.cpp -o src/error.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/euler.lo src/euler.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/euler.cpp -fPIC -DPIC -o src/.libs/euler.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/euler.cpp -o src/euler.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/exp_model.lo src/exp_model.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/exp_model.cpp -fPIC -DPIC -o src/.libs/exp_model.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/exp_model.cpp -o src/exp_model.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/fftw.lo src/fftw.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/fftw.cpp -fPIC -DPIC -o src/.libs/fftw.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/fftw.cpp -o src/fftw.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/filename.lo src/filename.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/filename.cpp -fPIC -DPIC -o src/.libs/filename.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/filename.cpp -o src/filename.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/funcs.lo src/funcs.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/funcs.cpp -fPIC -DPIC -o src/.libs/funcs.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/funcs.cpp -o src/funcs.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/healpix_sampling.lo src/healpix_sampling.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/healpix_sampling.cpp -fPIC -DPIC -o src/.libs/healpix_sampling.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/healpix_sampling.cpp -o src/healpix_sampling.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/image.lo src/image.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/image.cpp -fPIC -DPIC -o src/.libs/image.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/image.cpp -o src/image.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/mask.lo src/mask.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/mask.cpp -fPIC -DPIC -o src/.libs/mask.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/mask.cpp -o src/mask.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/matrix1d.lo src/matrix1d.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/matrix1d.cpp -fPIC -DPIC -o src/.libs/matrix1d.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/matrix1d.cpp -o src/matrix1d.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/matrix2d.lo src/matrix2d.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/matrix2d.cpp -fPIC -DPIC -o src/.libs/matrix2d.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/matrix2d.cpp -o src/matrix2d.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/memory.lo src/memory.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/memory.cpp -fPIC -DPIC -o src/.libs/memory.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/memory.cpp -o src/memory.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/metadata_container.lo src/metadata_container.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_container.cpp -fPIC -DPIC -o src/.libs/metadata_container.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_container.cpp -o src/metadata_container.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/metadata_label.lo src/metadata_label.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_label.cpp -fPIC -DPIC -o src/.libs/metadata_label.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_label.cpp -o src/metadata_label.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/metadata_table.lo src/metadata_table.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_table.cpp -fPIC -DPIC -o src/.libs/metadata_table.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_table.cpp -o src/metadata_table.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ml_model.lo src/ml_model.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_model.cpp -fPIC -DPIC -o src/.libs/ml_model.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_model.cpp -o src/ml_model.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ml_optimiser.lo src/ml_optimiser.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_optimiser.cpp -fPIC -DPIC -o src/.libs/ml_optimiser.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_optimiser.cpp -o src/ml_optimiser.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/multidim_array.lo src/multidim_array.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/multidim_array.cpp -fPIC -DPIC -o src/.libs/multidim_array.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/multidim_array.cpp -o src/multidim_array.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/numerical_recipes.lo src/numerical_recipes.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/numerical_recipes.cpp -fPIC -DPIC -o src/.libs/numerical_recipes.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/numerical_recipes.cpp -o src/numerical_recipes.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/parallel.lo src/parallel.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/parallel.cpp -fPIC -DPIC -o src/.libs/parallel.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/parallel.cpp -o src/parallel.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/particle_polisher.lo src/particle_polisher.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_polisher.cpp -fPIC -DPIC -o src/.libs/particle_polisher.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_polisher.cpp -o src/particle_polisher.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/particle_sorter.lo src/particle_sorter.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_sorter.cpp -fPIC -DPIC -o src/.libs/particle_sorter.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_sorter.cpp -o src/particle_sorter.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/postprocessing.lo src/postprocessing.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/postprocessing.cpp -fPIC -DPIC -o src/.libs/postprocessing.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/postprocessing.cpp -o src/postprocessing.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/preprocessing.lo src/preprocessing.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/preprocessing.cpp -fPIC -DPIC -o src/.libs/preprocessing.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/preprocessing.cpp -o src/preprocessing.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/projector.lo src/projector.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/projector.cpp -fPIC -DPIC -o src/.libs/projector.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/projector.cpp -o src/projector.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/strings.lo src/strings.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/strings.cpp -fPIC -DPIC -o src/.libs/strings.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/strings.cpp -o src/strings.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/symmetries.lo src/symmetries.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/symmetries.cpp -fPIC -DPIC -o src/.libs/symmetries.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/symmetries.cpp -o src/symmetries.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/tabfuncs.lo src/tabfuncs.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/tabfuncs.cpp -fPIC -DPIC -o src/.libs/tabfuncs.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/tabfuncs.cpp -o src/tabfuncs.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/time.lo src/time.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/time.cpp -fPIC -DPIC -o src/.libs/time.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/time.cpp -o src/time.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/transformations.lo src/transformations.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/transformations.cpp -fPIC -DPIC -o src/.libs/transformations.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/transformations.cpp -o src/transformations.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/Healpix_2.15a/cxxutils.lo src/Healpix_2.15a/cxxutils.cc | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/Healpix_2.15a/cxxutils.cc -fPIC -DPIC -o src/Healpix_2.15a/.libs/cxxutils.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/Healpix_2.15a/cxxutils.cc -o src/Healpix_2.15a/cxxutils.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/Healpix_2.15a/healpix_base.lo src/Healpix_2.15a/healpix_base.cc | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/Healpix_2.15a/healpix_base.cc -fPIC -DPIC -o src/Healpix_2.15a/.libs/healpix_base.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/Healpix_2.15a/healpix_base.cc -o src/Healpix_2.15a/healpix_base.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/mpi.lo src/mpi.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/mpi.cpp -fPIC -DPIC -o src/.libs/mpi.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/mpi.cpp -o src/mpi.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/autopicker_mpi.lo src/autopicker_mpi.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/autopicker_mpi.cpp -fPIC -DPIC -o src/.libs/autopicker_mpi.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/autopicker_mpi.cpp -o src/autopicker_mpi.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ctffind_runner_mpi.lo src/ctffind_runner_mpi.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctffind_runner_mpi.cpp -fPIC -DPIC -o src/.libs/ctffind_runner_mpi.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctffind_runner_mpi.cpp -o src/ctffind_runner_mpi.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/particle_polisher_mpi.lo src/particle_polisher_mpi.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_polisher_mpi.cpp -fPIC -DPIC -o src/.libs/particle_polisher_mpi.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_polisher_mpi.cpp -o src/particle_polisher_mpi.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/particle_sorter_mpi.lo src/particle_sorter_mpi.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_sorter_mpi.cpp -fPIC -DPIC -o src/.libs/particle_sorter_mpi.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_sorter_mpi.cpp -o src/particle_sorter_mpi.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/preprocessing_mpi.lo src/preprocessing_mpi.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/preprocessing_mpi.cpp -fPIC -DPIC -o src/.libs/preprocessing_mpi.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/preprocessing_mpi.cpp -o src/preprocessing_mpi.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ml_optimiser_mpi.lo src/ml_optimiser_mpi.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_optimiser_mpi.cpp -fPIC -DPIC -o src/.libs/ml_optimiser_mpi.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_optimiser_mpi.cpp -o src/ml_optimiser_mpi.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/displayer.lo src/displayer.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/displayer.cpp -fPIC -DPIC -o src/.libs/displayer.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/displayer.cpp -o src/displayer.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/gui_entries.lo src/gui_entries.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/gui_entries.cpp -fPIC -DPIC -o src/.libs/gui_entries.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/gui_entries.cpp -o src/gui_entries.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/gui_jobwindow.lo src/gui_jobwindow.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/gui_jobwindow.cpp -fPIC -DPIC -o src/.libs/gui_jobwindow.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/gui_jobwindow.cpp -o src/gui_jobwindow.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/gui_mainwindow.lo src/gui_mainwindow.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/gui_mainwindow.cpp -fPIC -DPIC -o src/.libs/gui_mainwindow.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/gui_mainwindow.cpp -o src/gui_mainwindow.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/manualpicker.lo src/manualpicker.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/manualpicker.cpp -fPIC -DPIC -o src/.libs/manualpicker.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/manualpicker.cpp -o src/manualpicker.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -version-info 1:3:0 -lfltk -lX11 -o librelion-1.3.la -rpath /usr/lib/x86_64-linux-gnu src/args.lo src/assembly.lo src/autopicker.lo src/backprojector.lo src/complex.lo src/ctf.lo src/ctffind_runner.lo src/error.lo src/euler.lo src/exp_model.lo src/fftw.lo src/filename.lo src/funcs.lo src/healpix_sampling.lo src/image.lo src/mask.lo src/matrix1d.lo src/matrix2d.lo src/memory.lo src/metadata_container.lo src/metadata_label.lo src/metadata_table.lo src/ml_model.lo src/ml_optimiser.lo src/multidim_array.lo src/numerical_recipes.lo src/parallel.lo src/particle_polisher.lo src/particle_sorter.lo src/postprocessing.lo src/preprocessing.lo src/projector.lo src/strings.lo src/symmetries.lo src/tabfuncs.lo src/time.lo src/transformations.lo src/Healpix_2.15a/cxxutils.lo src/Healpix_2.15a/healpix_base.lo src/mpi.lo src/autopicker_mpi.lo src/ctffind_runner_mpi.lo src/particle_polisher_mpi.lo src/particle_sorter_mpi.lo src/preprocessing_mpi.lo src/ml_optimiser_mpi.lo src/displayer.lo src/gui_entries.lo src/gui_jobwindow.lo src/gui_mainwindow.lo src/manualpicker.lo -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/5/crtbeginS.o src/.libs/args.o src/.libs/assembly.o src/.libs/autopicker.o src/.libs/backprojector.o src/.libs/complex.o src/.libs/ctf.o src/.libs/ctffind_runner.o src/.libs/error.o src/.libs/euler.o src/.libs/exp_model.o src/.libs/fftw.o src/.libs/filename.o src/.libs/funcs.o src/.libs/healpix_sampling.o src/.libs/image.o src/.libs/mask.o src/.libs/matrix1d.o src/.libs/matrix2d.o src/.libs/memory.o src/.libs/metadata_container.o src/.libs/metadata_label.o src/.libs/metadata_table.o src/.libs/ml_model.o src/.libs/ml_optimiser.o src/.libs/multidim_array.o src/.libs/numerical_recipes.o src/.libs/parallel.o src/.libs/particle_polisher.o src/.libs/particle_sorter.o src/.libs/postprocessing.o src/.libs/preprocessing.o src/.libs/projector.o src/.libs/strings.o src/.libs/symmetries.o src/.libs/tabfuncs.o src/.libs/time.o src/.libs/transformations.o src/Healpix_2.15a/.libs/cxxutils.o src/Healpix_2.15a/.libs/healpix_base.o src/.libs/mpi.o src/.libs/autopicker_mpi.o src/.libs/ctffind_runner_mpi.o src/.libs/particle_polisher_mpi.o src/.libs/particle_sorter_mpi.o src/.libs/preprocessing_mpi.o src/.libs/ml_optimiser_mpi.o src/.libs/displayer.o src/.libs/gui_entries.o src/.libs/gui_jobwindow.o src/.libs/gui_mainwindow.o src/.libs/manualpicker.o -lfltk -lX11 -lfftw3_threads -lfftw3 -L/usr/lib/gcc/x86_64-linux-gnu/5 -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/5/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu/crtn.o -O2 -Wl,-soname -Wl,librelion-1.3.so.1 -o .libs/librelion-1.3.so.1.0.3 | |
| libtool: link: (cd ".libs" && rm -f "librelion-1.3.so.1" && ln -s "librelion-1.3.so.1.0.3" "librelion-1.3.so.1") | |
| libtool: link: (cd ".libs" && rm -f "librelion-1.3.so" && ln -s "librelion-1.3.so.1.0.3" "librelion-1.3.so") | |
| libtool: link: ar cru .libs/librelion-1.3.a src/args.o src/assembly.o src/autopicker.o src/backprojector.o src/complex.o src/ctf.o src/ctffind_runner.o src/error.o src/euler.o src/exp_model.o src/fftw.o src/filename.o src/funcs.o src/healpix_sampling.o src/image.o src/mask.o src/matrix1d.o src/matrix2d.o src/memory.o src/metadata_container.o src/metadata_label.o src/metadata_table.o src/ml_model.o src/ml_optimiser.o src/multidim_array.o src/numerical_recipes.o src/parallel.o src/particle_polisher.o src/particle_sorter.o src/postprocessing.o src/preprocessing.o src/projector.o src/strings.o src/symmetries.o src/tabfuncs.o src/time.o src/transformations.o src/Healpix_2.15a/cxxutils.o src/Healpix_2.15a/healpix_base.o src/mpi.o src/autopicker_mpi.o src/ctffind_runner_mpi.o src/particle_polisher_mpi.o src/particle_sorter_mpi.o src/preprocessing_mpi.o src/ml_optimiser_mpi.o src/displayer.o src/gui_entries.o src/gui_jobwindow.o src/gui_mainwindow.o src/manualpicker.o | |
| ar: `u' modifier ignored since `D' is the default (see `U') | |
| libtool: link: ranlib .libs/librelion-1.3.a | |
| libtool: link: ( cd ".libs" && rm -f "librelion-1.3.la" && ln -s "../librelion-1.3.la" "librelion-1.3.la" ) | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/project.o src/apps/project.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o project src/apps/project.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/project src/apps/project.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/reconstruct.o src/apps/reconstruct.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o reconstruct src/apps/reconstruct.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/reconstruct src/apps/reconstruct.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/refine.o src/apps/refine.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o refine src/apps/refine.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/refine src/apps/refine.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/preprocess.o src/apps/preprocess.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o preprocess src/apps/preprocess.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/preprocess src/apps/preprocess.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/postprocess.o src/apps/postprocess.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o postprocess src/apps/postprocess.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/postprocess src/apps/postprocess.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/autopick.o src/apps/autopick.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o autopick src/apps/autopick.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/autopick src/apps/autopick.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/particle_polish.o src/apps/particle_polish.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o particle_polish src/apps/particle_polish.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/particle_polish src/apps/particle_polish.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/particle_sort.o src/apps/particle_sort.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o particle_sort src/apps/particle_sort.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/particle_sort src/apps/particle_sort.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/run_ctffind.o src/apps/run_ctffind.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o run_ctffind src/apps/run_ctffind.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/run_ctffind src/apps/run_ctffind.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/refine_mpi.o src/apps/refine_mpi.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o refine_mpi src/apps/refine_mpi.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/refine_mpi src/apps/refine_mpi.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/preprocess_mpi.o src/apps/preprocess_mpi.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o preprocess_mpi src/apps/preprocess_mpi.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/preprocess_mpi src/apps/preprocess_mpi.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/autopick_mpi.o src/apps/autopick_mpi.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o autopick_mpi src/apps/autopick_mpi.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/autopick_mpi src/apps/autopick_mpi.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/particle_polish_mpi.o src/apps/particle_polish_mpi.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o particle_polish_mpi src/apps/particle_polish_mpi.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/particle_polish_mpi src/apps/particle_polish_mpi.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/particle_sort_mpi.o src/apps/particle_sort_mpi.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o particle_sort_mpi src/apps/particle_sort_mpi.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/particle_sort_mpi src/apps/particle_sort_mpi.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/run_ctffind_mpi.o src/apps/run_ctffind_mpi.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o run_ctffind_mpi src/apps/run_ctffind_mpi.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/run_ctffind_mpi src/apps/run_ctffind_mpi.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/manualpick.o src/apps/manualpick.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o manualpick src/apps/manualpick.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/manualpick src/apps/manualpick.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/display.o src/apps/display.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o display src/apps/display.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/display src/apps/display.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/maingui.o src/apps/maingui.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o maingui src/apps/maingui.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/maingui src/apps/maingui.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/mask_create.o src/apps/mask_create.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o mask_create src/apps/mask_create.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/mask_create src/apps/mask_create.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/stack_create.o src/apps/stack_create.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o stack_create src/apps/stack_create.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/stack_create src/apps/stack_create.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/image_handler.o src/apps/image_handler.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o image_handler src/apps/image_handler.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/image_handler src/apps/image_handler.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/find_tiltpairs.o src/apps/find_tiltpairs.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o find_tiltpairs src/apps/find_tiltpairs.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/find_tiltpairs src/apps/find_tiltpairs.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| make[3]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make[2]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make[2]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make[3]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/lib/x86_64-linux-gnu' | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c librelion-1.3.la '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/librelion-1.3.so.1.0.3 /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 | |
| libtool: install: (cd /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/lib/x86_64-linux-gnu && { ln -s -f librelion-1.3.so.1.0.3 librelion-1.3.so.1 || { rm -f librelion-1.3.so.1 && ln -s librelion-1.3.so.1.0.3 librelion-1.3.so.1; }; }) | |
| libtool: install: (cd /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/lib/x86_64-linux-gnu && { ln -s -f librelion-1.3.so.1.0.3 librelion-1.3.so || { rm -f librelion-1.3.so && ln -s librelion-1.3.so.1.0.3 librelion-1.3.so; }; }) | |
| libtool: install: /usr/bin/install -c .libs/librelion-1.3.lai /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/lib/x86_64-linux-gnu/librelion-1.3.la | |
| libtool: install: /usr/bin/install -c .libs/librelion-1.3.a /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/lib/x86_64-linux-gnu/librelion-1.3.a | |
| libtool: install: chmod 644 /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/lib/x86_64-linux-gnu/librelion-1.3.a | |
| libtool: install: ranlib /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/lib/x86_64-linux-gnu/librelion-1.3.a | |
| libtool: install: warning: remember to run `libtool --finish /usr/lib/x86_64-linux-gnu' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin' | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c project '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_project' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/project /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_project | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c reconstruct '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_reconstruct' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/reconstruct /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_reconstruct | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c refine '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_refine' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/refine /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_refine | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c preprocess '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_preprocess' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/preprocess /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_preprocess | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c postprocess '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_postprocess' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/postprocess /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_postprocess | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c autopick '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_autopick' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/autopick /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_autopick | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c particle_polish '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_particle_polish' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/particle_polish /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_particle_polish | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c particle_sort '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_particle_sort' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/particle_sort /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_particle_sort | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c run_ctffind '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_run_ctffind' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/run_ctffind /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_run_ctffind | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c refine_mpi '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_refine_mpi' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/refine_mpi /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_refine_mpi | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c preprocess_mpi '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_preprocess_mpi' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/preprocess_mpi /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_preprocess_mpi | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c autopick_mpi '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_autopick_mpi' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/autopick_mpi /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_autopick_mpi | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c particle_polish_mpi '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_particle_polish_mpi' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/particle_polish_mpi /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_particle_polish_mpi | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c particle_sort_mpi '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_particle_sort_mpi' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/particle_sort_mpi /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_particle_sort_mpi | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c run_ctffind_mpi '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_run_ctffind_mpi' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/run_ctffind_mpi /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_run_ctffind_mpi | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c manualpick '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_manualpick' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/manualpick /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_manualpick | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c display '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_display' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/display /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_display | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c maingui '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_maingui' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/maingui /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_maingui | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c mask_create '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_mask_create' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/mask_create /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_mask_create | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c stack_create '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_stack_create' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/stack_create /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_stack_create | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c image_handler '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_image_handler' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/image_handler /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_image_handler | |
| /bin/bash ./libtool --mode=install /usr/bin/install -c find_tiltpairs '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_find_tiltpairs' | |
| libtool: install: warning: `librelion-1.3.la' has not been installed in `/usr/lib/x86_64-linux-gnu' | |
| libtool: install: /usr/bin/install -c .libs/find_tiltpairs /home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_find_tiltpairs | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin' | |
| /usr/bin/install -c scripts/star_datablock_ctfdat '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_star_datablock_ctfdat' | |
| /usr/bin/install -c scripts/star_datablock_stack '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_star_datablock_stack' | |
| /usr/bin/install -c scripts/star_datablock_singlefiles '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_star_datablock_singlefiles' | |
| /usr/bin/install -c scripts/star_loopheader '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_star_loopheader' | |
| /usr/bin/install -c scripts/star_plottable '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_star_plottable' | |
| /usr/bin/install -c scripts/star_printtable '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_star_printtable' | |
| /usr/bin/install -c scripts/qsub.csh '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/bin/./relion_qsub.csh' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/include/relion-1.3' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/include/relion-1.3/src' | |
| /usr/bin/install -c -m 644 src/args.h src/assembly.h src/autopicker.h src/backprojector.h src/complex.h src/ctf.h src/ctffind_runner.h src/displayer.h src/error.h src/euler.h src/exp_model.h src/fftw.h src/filename.h src/funcs.h src/gcc_version.h src/gui_entries.h src/gui_jobwindow.h src/gui_mainwindow.h src/healpix_sampling.h src/image.h src/macros.h src/mask.h src/matrix1d.h src/matrix2d.h src/memory.h src/metadata_container.h src/metadata_label.h src/metadata_table.h src/ml_model.h src/ml_optimiser.h src/multidim_array.h src/numerical_recipes.h src/parallel.h src/particle_polisher.h src/particle_sorter.h src/postprocessing.h src/preprocessing.h src/projector.h src/rwIMAGIC.h src/rwMRC.h '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/include/relion-1.3/src' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/include/relion-1.3/src' | |
| /usr/bin/install -c -m 644 src/rwSPIDER.h src/strings.h src/symmetries.h src/tabfuncs.h src/time.h src/transformations.h src/mpi.h src/autopicker_mpi.h src/ctffind_runner_mpi.h src/particle_polisher_mpi.h src/particle_sorter_mpi.h src/preprocessing_mpi.h src/ml_optimiser_mpi.h src/displayer.h src/gui_entries.h src/gui_jobwindow.h src/gui_mainwindow.h src/manualpicker.h '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/include/relion-1.3/src' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/include/relion-1.3/src/Healpix_2.15a' | |
| /usr/bin/install -c -m 644 src/Healpix_2.15a/arr.h src/Healpix_2.15a/cxxutils.h src/Healpix_2.15a/datatypes.h src/Healpix_2.15a/geom_utils.h src/Healpix_2.15a/lsconstants.h src/Healpix_2.15a/message_error.h src/Healpix_2.15a/openmp_support.h src/Healpix_2.15a/pointing.h src/Healpix_2.15a/vec3.h src/Healpix_2.15a/healpix_base.h '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/include/relion-1.3/src/Healpix_2.15a' | |
| /usr/bin/install -c -m 644 relion.h '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/include/relion-1.3/.' | |
| /bin/mkdir -p '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/lib/x86_64-linux-gnu/pkgconfig' | |
| /usr/bin/install -c -m 644 relion-1.3.pc '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg/debian/tmp/mpi+gui/usr/lib/x86_64-linux-gnu/pkgconfig' | |
| make[3]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make[2]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| make clean | |
| make[2]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| rm -f project reconstruct refine preprocess postprocess autopick particle_polish particle_sort run_ctffind refine_mpi preprocess_mpi autopick_mpi particle_polish_mpi particle_sort_mpi run_ctffind_mpi manualpick display maingui mask_create stack_create image_handler find_tiltpairs | |
| test -z "librelion-1.3.la" || rm -f librelion-1.3.la | |
| rm -f ./so_locations | |
| rm -rf .libs _libs | |
| rm -rf src/.libs src/_libs | |
| rm -rf src/Healpix_2.15a/.libs src/Healpix_2.15a/_libs | |
| rm -f *.o | |
| rm -f src/*.o | |
| rm -f src/*.lo | |
| rm -f src/Healpix_2.15a/*.o | |
| rm -f src/Healpix_2.15a/*.lo | |
| rm -f src/apps/*.o | |
| rm -f *.lo | |
| make[2]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| # clear dependency_libs field in *.la files | |
| # see lintian non-empty-dependency_libs-in-la-file for reference | |
| sed -i "/dependency_libs/ s/'.*'/''/" $(find debian/tmp/ -name '*.la') | |
| make[1]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| dh_auto_test | |
| make -j1 check | |
| make[1]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/args.lo src/args.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/args.cpp -fPIC -DPIC -o src/.libs/args.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/args.cpp -o src/args.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/assembly.lo src/assembly.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/assembly.cpp -fPIC -DPIC -o src/.libs/assembly.o | |
| src/assembly.cpp: In member function 'void Assembly::writePDB(std::__cxx11::string)': | |
| src/assembly.cpp:363:61: warning: format '%d' expects argument of type 'int', but argument 3 has type 'long int' [-Wformat=] | |
| molecules[imol].name.c_str()); | |
| ^ | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/assembly.cpp -o src/assembly.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/autopicker.lo src/autopicker.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/autopicker.cpp -fPIC -DPIC -o src/.libs/autopicker.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/autopicker.cpp -o src/autopicker.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/backprojector.lo src/backprojector.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/backprojector.cpp -fPIC -DPIC -o src/.libs/backprojector.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/backprojector.cpp -o src/backprojector.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/complex.lo src/complex.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/complex.cpp -fPIC -DPIC -o src/.libs/complex.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/complex.cpp -o src/complex.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ctf.lo src/ctf.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctf.cpp -fPIC -DPIC -o src/.libs/ctf.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctf.cpp -o src/ctf.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ctffind_runner.lo src/ctffind_runner.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctffind_runner.cpp -fPIC -DPIC -o src/.libs/ctffind_runner.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctffind_runner.cpp -o src/ctffind_runner.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/error.lo src/error.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/error.cpp -fPIC -DPIC -o src/.libs/error.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/error.cpp -o src/error.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/euler.lo src/euler.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/euler.cpp -fPIC -DPIC -o src/.libs/euler.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/euler.cpp -o src/euler.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/exp_model.lo src/exp_model.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/exp_model.cpp -fPIC -DPIC -o src/.libs/exp_model.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/exp_model.cpp -o src/exp_model.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/fftw.lo src/fftw.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/fftw.cpp -fPIC -DPIC -o src/.libs/fftw.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/fftw.cpp -o src/fftw.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/filename.lo src/filename.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/filename.cpp -fPIC -DPIC -o src/.libs/filename.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/filename.cpp -o src/filename.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/funcs.lo src/funcs.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/funcs.cpp -fPIC -DPIC -o src/.libs/funcs.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/funcs.cpp -o src/funcs.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/healpix_sampling.lo src/healpix_sampling.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/healpix_sampling.cpp -fPIC -DPIC -o src/.libs/healpix_sampling.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/healpix_sampling.cpp -o src/healpix_sampling.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/image.lo src/image.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/image.cpp -fPIC -DPIC -o src/.libs/image.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/image.cpp -o src/image.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/mask.lo src/mask.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/mask.cpp -fPIC -DPIC -o src/.libs/mask.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/mask.cpp -o src/mask.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/matrix1d.lo src/matrix1d.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/matrix1d.cpp -fPIC -DPIC -o src/.libs/matrix1d.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/matrix1d.cpp -o src/matrix1d.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/matrix2d.lo src/matrix2d.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/matrix2d.cpp -fPIC -DPIC -o src/.libs/matrix2d.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/matrix2d.cpp -o src/matrix2d.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/memory.lo src/memory.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/memory.cpp -fPIC -DPIC -o src/.libs/memory.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/memory.cpp -o src/memory.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/metadata_container.lo src/metadata_container.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_container.cpp -fPIC -DPIC -o src/.libs/metadata_container.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_container.cpp -o src/metadata_container.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/metadata_label.lo src/metadata_label.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_label.cpp -fPIC -DPIC -o src/.libs/metadata_label.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_label.cpp -o src/metadata_label.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/metadata_table.lo src/metadata_table.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_table.cpp -fPIC -DPIC -o src/.libs/metadata_table.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/metadata_table.cpp -o src/metadata_table.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ml_model.lo src/ml_model.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_model.cpp -fPIC -DPIC -o src/.libs/ml_model.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_model.cpp -o src/ml_model.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ml_optimiser.lo src/ml_optimiser.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_optimiser.cpp -fPIC -DPIC -o src/.libs/ml_optimiser.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_optimiser.cpp -o src/ml_optimiser.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/multidim_array.lo src/multidim_array.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/multidim_array.cpp -fPIC -DPIC -o src/.libs/multidim_array.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/multidim_array.cpp -o src/multidim_array.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/numerical_recipes.lo src/numerical_recipes.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/numerical_recipes.cpp -fPIC -DPIC -o src/.libs/numerical_recipes.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/numerical_recipes.cpp -o src/numerical_recipes.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/parallel.lo src/parallel.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/parallel.cpp -fPIC -DPIC -o src/.libs/parallel.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/parallel.cpp -o src/parallel.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/particle_polisher.lo src/particle_polisher.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_polisher.cpp -fPIC -DPIC -o src/.libs/particle_polisher.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_polisher.cpp -o src/particle_polisher.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/particle_sorter.lo src/particle_sorter.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_sorter.cpp -fPIC -DPIC -o src/.libs/particle_sorter.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_sorter.cpp -o src/particle_sorter.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/postprocessing.lo src/postprocessing.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/postprocessing.cpp -fPIC -DPIC -o src/.libs/postprocessing.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/postprocessing.cpp -o src/postprocessing.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/preprocessing.lo src/preprocessing.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/preprocessing.cpp -fPIC -DPIC -o src/.libs/preprocessing.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/preprocessing.cpp -o src/preprocessing.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/projector.lo src/projector.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/projector.cpp -fPIC -DPIC -o src/.libs/projector.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/projector.cpp -o src/projector.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/strings.lo src/strings.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/strings.cpp -fPIC -DPIC -o src/.libs/strings.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/strings.cpp -o src/strings.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/symmetries.lo src/symmetries.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/symmetries.cpp -fPIC -DPIC -o src/.libs/symmetries.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/symmetries.cpp -o src/symmetries.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/tabfuncs.lo src/tabfuncs.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/tabfuncs.cpp -fPIC -DPIC -o src/.libs/tabfuncs.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/tabfuncs.cpp -o src/tabfuncs.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/time.lo src/time.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/time.cpp -fPIC -DPIC -o src/.libs/time.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/time.cpp -o src/time.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/transformations.lo src/transformations.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/transformations.cpp -fPIC -DPIC -o src/.libs/transformations.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/transformations.cpp -o src/transformations.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/Healpix_2.15a/cxxutils.lo src/Healpix_2.15a/cxxutils.cc | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/Healpix_2.15a/cxxutils.cc -fPIC -DPIC -o src/Healpix_2.15a/.libs/cxxutils.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/Healpix_2.15a/cxxutils.cc -o src/Healpix_2.15a/cxxutils.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/Healpix_2.15a/healpix_base.lo src/Healpix_2.15a/healpix_base.cc | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/Healpix_2.15a/healpix_base.cc -fPIC -DPIC -o src/Healpix_2.15a/.libs/healpix_base.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/Healpix_2.15a/healpix_base.cc -o src/Healpix_2.15a/healpix_base.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/mpi.lo src/mpi.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/mpi.cpp -fPIC -DPIC -o src/.libs/mpi.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/mpi.cpp -o src/mpi.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/autopicker_mpi.lo src/autopicker_mpi.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/autopicker_mpi.cpp -fPIC -DPIC -o src/.libs/autopicker_mpi.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/autopicker_mpi.cpp -o src/autopicker_mpi.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ctffind_runner_mpi.lo src/ctffind_runner_mpi.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctffind_runner_mpi.cpp -fPIC -DPIC -o src/.libs/ctffind_runner_mpi.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ctffind_runner_mpi.cpp -o src/ctffind_runner_mpi.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/particle_polisher_mpi.lo src/particle_polisher_mpi.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_polisher_mpi.cpp -fPIC -DPIC -o src/.libs/particle_polisher_mpi.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_polisher_mpi.cpp -o src/particle_polisher_mpi.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/particle_sorter_mpi.lo src/particle_sorter_mpi.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_sorter_mpi.cpp -fPIC -DPIC -o src/.libs/particle_sorter_mpi.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/particle_sorter_mpi.cpp -o src/particle_sorter_mpi.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/preprocessing_mpi.lo src/preprocessing_mpi.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/preprocessing_mpi.cpp -fPIC -DPIC -o src/.libs/preprocessing_mpi.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/preprocessing_mpi.cpp -o src/preprocessing_mpi.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/ml_optimiser_mpi.lo src/ml_optimiser_mpi.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_optimiser_mpi.cpp -fPIC -DPIC -o src/.libs/ml_optimiser_mpi.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/ml_optimiser_mpi.cpp -o src/ml_optimiser_mpi.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/displayer.lo src/displayer.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/displayer.cpp -fPIC -DPIC -o src/.libs/displayer.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/displayer.cpp -o src/displayer.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/gui_entries.lo src/gui_entries.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/gui_entries.cpp -fPIC -DPIC -o src/.libs/gui_entries.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/gui_entries.cpp -o src/gui_entries.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/gui_jobwindow.lo src/gui_jobwindow.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/gui_jobwindow.cpp -fPIC -DPIC -o src/.libs/gui_jobwindow.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/gui_jobwindow.cpp -o src/gui_jobwindow.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/gui_mainwindow.lo src/gui_mainwindow.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/gui_mainwindow.cpp -fPIC -DPIC -o src/.libs/gui_mainwindow.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/gui_mainwindow.cpp -o src/gui_mainwindow.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=compile mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/manualpicker.lo src/manualpicker.cpp | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/manualpicker.cpp -fPIC -DPIC -o src/.libs/manualpicker.o | |
| libtool: compile: mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c src/manualpicker.cpp -o src/manualpicker.o >/dev/null 2>&1 | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -version-info 1:3:0 -lfltk -lX11 -o librelion-1.3.la -rpath /usr/lib/x86_64-linux-gnu src/args.lo src/assembly.lo src/autopicker.lo src/backprojector.lo src/complex.lo src/ctf.lo src/ctffind_runner.lo src/error.lo src/euler.lo src/exp_model.lo src/fftw.lo src/filename.lo src/funcs.lo src/healpix_sampling.lo src/image.lo src/mask.lo src/matrix1d.lo src/matrix2d.lo src/memory.lo src/metadata_container.lo src/metadata_label.lo src/metadata_table.lo src/ml_model.lo src/ml_optimiser.lo src/multidim_array.lo src/numerical_recipes.lo src/parallel.lo src/particle_polisher.lo src/particle_sorter.lo src/postprocessing.lo src/preprocessing.lo src/projector.lo src/strings.lo src/symmetries.lo src/tabfuncs.lo src/time.lo src/transformations.lo src/Healpix_2.15a/cxxutils.lo src/Healpix_2.15a/healpix_base.lo src/mpi.lo src/autopicker_mpi.lo src/ctffind_runner_mpi.lo src/particle_polisher_mpi.lo src/particle_sorter_mpi.lo src/preprocessing_mpi.lo src/ml_optimiser_mpi.lo src/displayer.lo src/gui_entries.lo src/gui_jobwindow.lo src/gui_mainwindow.lo src/manualpicker.lo -lfftw3_threads -lfftw3 | |
| libtool: link: g++ -fPIC -DPIC -shared -nostdlib /usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu/crti.o /usr/lib/gcc/x86_64-linux-gnu/5/crtbeginS.o src/.libs/args.o src/.libs/assembly.o src/.libs/autopicker.o src/.libs/backprojector.o src/.libs/complex.o src/.libs/ctf.o src/.libs/ctffind_runner.o src/.libs/error.o src/.libs/euler.o src/.libs/exp_model.o src/.libs/fftw.o src/.libs/filename.o src/.libs/funcs.o src/.libs/healpix_sampling.o src/.libs/image.o src/.libs/mask.o src/.libs/matrix1d.o src/.libs/matrix2d.o src/.libs/memory.o src/.libs/metadata_container.o src/.libs/metadata_label.o src/.libs/metadata_table.o src/.libs/ml_model.o src/.libs/ml_optimiser.o src/.libs/multidim_array.o src/.libs/numerical_recipes.o src/.libs/parallel.o src/.libs/particle_polisher.o src/.libs/particle_sorter.o src/.libs/postprocessing.o src/.libs/preprocessing.o src/.libs/projector.o src/.libs/strings.o src/.libs/symmetries.o src/.libs/tabfuncs.o src/.libs/time.o src/.libs/transformations.o src/Healpix_2.15a/.libs/cxxutils.o src/Healpix_2.15a/.libs/healpix_base.o src/.libs/mpi.o src/.libs/autopicker_mpi.o src/.libs/ctffind_runner_mpi.o src/.libs/particle_polisher_mpi.o src/.libs/particle_sorter_mpi.o src/.libs/preprocessing_mpi.o src/.libs/ml_optimiser_mpi.o src/.libs/displayer.o src/.libs/gui_entries.o src/.libs/gui_jobwindow.o src/.libs/gui_mainwindow.o src/.libs/manualpicker.o -lfltk -lX11 -lfftw3_threads -lfftw3 -L/usr/lib/gcc/x86_64-linux-gnu/5 -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu -L/usr/lib/gcc/x86_64-linux-gnu/5/../../../../lib -L/lib/x86_64-linux-gnu -L/lib/../lib -L/usr/lib/x86_64-linux-gnu -L/usr/lib/../lib -L/usr/lib/gcc/x86_64-linux-gnu/5/../../.. -lstdc++ -lm -lc -lgcc_s /usr/lib/gcc/x86_64-linux-gnu/5/crtendS.o /usr/lib/gcc/x86_64-linux-gnu/5/../../../x86_64-linux-gnu/crtn.o -O2 -Wl,-soname -Wl,librelion-1.3.so.1 -o .libs/librelion-1.3.so.1.0.3 | |
| libtool: link: (cd ".libs" && rm -f "librelion-1.3.so.1" && ln -s "librelion-1.3.so.1.0.3" "librelion-1.3.so.1") | |
| libtool: link: (cd ".libs" && rm -f "librelion-1.3.so" && ln -s "librelion-1.3.so.1.0.3" "librelion-1.3.so") | |
| libtool: link: ar cru .libs/librelion-1.3.a src/args.o src/assembly.o src/autopicker.o src/backprojector.o src/complex.o src/ctf.o src/ctffind_runner.o src/error.o src/euler.o src/exp_model.o src/fftw.o src/filename.o src/funcs.o src/healpix_sampling.o src/image.o src/mask.o src/matrix1d.o src/matrix2d.o src/memory.o src/metadata_container.o src/metadata_label.o src/metadata_table.o src/ml_model.o src/ml_optimiser.o src/multidim_array.o src/numerical_recipes.o src/parallel.o src/particle_polisher.o src/particle_sorter.o src/postprocessing.o src/preprocessing.o src/projector.o src/strings.o src/symmetries.o src/tabfuncs.o src/time.o src/transformations.o src/Healpix_2.15a/cxxutils.o src/Healpix_2.15a/healpix_base.o src/mpi.o src/autopicker_mpi.o src/ctffind_runner_mpi.o src/particle_polisher_mpi.o src/particle_sorter_mpi.o src/preprocessing_mpi.o src/ml_optimiser_mpi.o src/displayer.o src/gui_entries.o src/gui_jobwindow.o src/gui_mainwindow.o src/manualpicker.o | |
| ar: `u' modifier ignored since `D' is the default (see `U') | |
| libtool: link: ranlib .libs/librelion-1.3.a | |
| libtool: link: ( cd ".libs" && rm -f "librelion-1.3.la" && ln -s "../librelion-1.3.la" "librelion-1.3.la" ) | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/project.o src/apps/project.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o project src/apps/project.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/project src/apps/project.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/reconstruct.o src/apps/reconstruct.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o reconstruct src/apps/reconstruct.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/reconstruct src/apps/reconstruct.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/refine.o src/apps/refine.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o refine src/apps/refine.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/refine src/apps/refine.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/preprocess.o src/apps/preprocess.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o preprocess src/apps/preprocess.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/preprocess src/apps/preprocess.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/postprocess.o src/apps/postprocess.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o postprocess src/apps/postprocess.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/postprocess src/apps/postprocess.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/autopick.o src/apps/autopick.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o autopick src/apps/autopick.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/autopick src/apps/autopick.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/particle_polish.o src/apps/particle_polish.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o particle_polish src/apps/particle_polish.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/particle_polish src/apps/particle_polish.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/particle_sort.o src/apps/particle_sort.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o particle_sort src/apps/particle_sort.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/particle_sort src/apps/particle_sort.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/run_ctffind.o src/apps/run_ctffind.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o run_ctffind src/apps/run_ctffind.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/run_ctffind src/apps/run_ctffind.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/refine_mpi.o src/apps/refine_mpi.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o refine_mpi src/apps/refine_mpi.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/refine_mpi src/apps/refine_mpi.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/preprocess_mpi.o src/apps/preprocess_mpi.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o preprocess_mpi src/apps/preprocess_mpi.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/preprocess_mpi src/apps/preprocess_mpi.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/autopick_mpi.o src/apps/autopick_mpi.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o autopick_mpi src/apps/autopick_mpi.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/autopick_mpi src/apps/autopick_mpi.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/particle_polish_mpi.o src/apps/particle_polish_mpi.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o particle_polish_mpi src/apps/particle_polish_mpi.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/particle_polish_mpi src/apps/particle_polish_mpi.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/particle_sort_mpi.o src/apps/particle_sort_mpi.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o particle_sort_mpi src/apps/particle_sort_mpi.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/particle_sort_mpi src/apps/particle_sort_mpi.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/run_ctffind_mpi.o src/apps/run_ctffind_mpi.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o run_ctffind_mpi src/apps/run_ctffind_mpi.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/run_ctffind_mpi src/apps/run_ctffind_mpi.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/manualpick.o src/apps/manualpick.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o manualpick src/apps/manualpick.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/manualpick src/apps/manualpick.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/display.o src/apps/display.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o display src/apps/display.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/display src/apps/display.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/maingui.o src/apps/maingui.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o maingui src/apps/maingui.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/maingui src/apps/maingui.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/mask_create.o src/apps/mask_create.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o mask_create src/apps/mask_create.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/mask_create src/apps/mask_create.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/stack_create.o src/apps/stack_create.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o stack_create src/apps/stack_create.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/stack_create src/apps/stack_create.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/image_handler.o src/apps/image_handler.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o image_handler src/apps/image_handler.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/image_handler src/apps/image_handler.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| mpicxx.openmpi -DHAVE_CONFIG_H -I. -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -I/usr/include/freetype2 -I/usr/include/cairo -I/usr/include/glib-2.0 -I/usr/lib/x86_64-linux-gnu/glib-2.0/include -I/usr/include/pixman-1 -I/usr/include/freetype2 -I/usr/include/libpng12 -fvisibility-inlines-hidden -D_LARGEFILE_SOURCE -D_LARGEFILE64_SOURCE -D_THREAD_SAFE -D_REENTRANT -fpic -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -c -o src/apps/find_tiltpairs.o src/apps/find_tiltpairs.cpp | |
| /bin/bash ./libtool --tag=CXX --mode=link mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -lfltk -lX11 -o find_tiltpairs src/apps/find_tiltpairs.o librelion-1.3.la -lfftw3_threads -lfftw3 | |
| libtool: link: mpicxx.openmpi -g -O2 -fstack-protector-strong -Wformat -Werror=format-security -o .libs/find_tiltpairs src/apps/find_tiltpairs.o -lfltk -lX11 ./.libs/librelion-1.3.so -lfftw3_threads -lfftw3 | |
| make[1]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| fakeroot debian/rules binary | |
| Relion API Version = 1.3 | |
| Relion most recent (current) lib interface = 1 | |
| dh binary --parallel --with autoreconf | |
| dh_testroot | |
| debian/rules override_dh_prep | |
| make[1]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| Relion API Version = 1.3 | |
| Relion most recent (current) lib interface = 1 | |
| # We don't want debian/tmp to be removed again ... | |
| dh_prep -X debian/tmp | |
| make[1]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| debian/rules override_dh_install | |
| make[1]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| Relion API Version = 1.3 | |
| Relion most recent (current) lib interface = 1 | |
| dh_install | |
| # relion_qsub.csh should just go to GUI d/examples | |
| find debian/relion-bi*/usr/bin -name relion_qsub.csh -delete | |
| make[1]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| dh_installdocs | |
| dh_installchangelogs | |
| dh_installexamples | |
| dh_lintian | |
| dh_perl | |
| dh_link | |
| dh_compress | |
| dh_fixperms | |
| dh_strip | |
| dh_makeshlibs | |
| debian/rules override_dh_shlibdeps | |
| make[1]: Entering directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| Relion API Version = 1.3 | |
| Relion most recent (current) lib interface = 1 | |
| # First for all packages apart from relion-bin* | |
| dh_shlibdeps -- -xrelion-bin -xrelion-bin+mpi -xrelion-bin+gui -xrelion-bin+mpi+gui | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin/usr/bin/relion_mask_create debian/relion-bin/usr/bin/relion_stack_create debian/relion-bin/usr/bin/relion_particle_polish debian/relion-bin/usr/bin/relion_particle_sort debian/relion-bin/usr/bin/relion_refine debian/relion-bin/usr/bin/relion_run_ctffind debian/relion-bin/usr/bin/relion_image_handler debian/relion-bin/usr/bin/relion_postprocess debian/relion-bin/usr/bin/relion_autopick debian/relion-bin/usr/bin/relion_reconstruct debian/relion-bin/usr/bin/relion_preprocess debian/relion-bin/usr/bin/relion_project debian/relion-bin/usr/bin/relion_find_tiltpairs were not linked against libfftw3_threads.so.3 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin/usr/bin/relion_mask_create debian/relion-bin/usr/bin/relion_stack_create debian/relion-bin/usr/bin/relion_particle_polish debian/relion-bin/usr/bin/relion_particle_sort debian/relion-bin/usr/bin/relion_refine debian/relion-bin/usr/bin/relion_run_ctffind debian/relion-bin/usr/bin/relion_image_handler debian/relion-bin/usr/bin/relion_postprocess debian/relion-bin/usr/bin/relion_autopick debian/relion-bin/usr/bin/relion_reconstruct debian/relion-bin/usr/bin/relion_preprocess debian/relion-bin/usr/bin/relion_project debian/relion-bin/usr/bin/relion_find_tiltpairs were not linked against libfftw3.so.3 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_particle_polish_mpi contains an unresolvable reference to symbol _ZN7MpiNodeD1Ev: it's probably a plugin | |
| dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_refine_mpi contains an unresolvable reference to symbol _ZN14MlOptimiserMpi10initialiseEv: it's probably a plugin | |
| dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_autopick_mpi contains an unresolvable reference to symbol _ZN13AutoPickerMpi4readEiPPc: it's probably a plugin | |
| dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_preprocess_mpi contains an unresolvable reference to symbol _ZN16PreprocessingMpi4readEiPPc: it's probably a plugin | |
| dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_particle_sort_mpi contains an unresolvable reference to symbol _ZN17ParticleSorterMpi3runEv: it's probably a plugin | |
| dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_run_ctffind_mpi contains an unresolvable reference to symbol _ZN7MpiNodeD1Ev: it's probably a plugin | |
| dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+mpi/usr/bin/relion_image_handler debian/relion-bin+mpi/usr/bin/relion_particle_polish_mpi debian/relion-bin+mpi/usr/bin/relion_stack_create debian/relion-bin+mpi/usr/bin/relion_preprocess debian/relion-bin+mpi/usr/bin/relion_refine_mpi debian/relion-bin+mpi/usr/bin/relion_reconstruct debian/relion-bin+mpi/usr/bin/relion_autopick_mpi debian/relion-bin+mpi/usr/bin/relion_project debian/relion-bin+mpi/usr/bin/relion_autopick debian/relion-bin+mpi/usr/bin/relion_particle_sort debian/relion-bin+mpi/usr/bin/relion_run_ctffind debian/relion-bin+mpi/usr/bin/relion_postprocess debian/relion-bin+mpi/usr/bin/relion_preprocess_mpi debian/relion-bin+mpi/usr/bin/relion_particle_sort_mpi debian/relion-bin+mpi/usr/bin/relion_mask_create debian/relion-bin+mpi/usr/bin/relion_refine debian/relion-bin+mpi/usr/bin/relion_find_tiltpairs debian/relion-bin+mpi/usr/bin/relion_run_ctffind_mpi debian/relion-bin+mpi/usr/bin/relion_particle_polish were not linked against libfftw3_threads.so.3 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+mpi/usr/bin/relion_image_handler debian/relion-bin+mpi/usr/bin/relion_particle_polish_mpi debian/relion-bin+mpi/usr/bin/relion_stack_create debian/relion-bin+mpi/usr/bin/relion_preprocess debian/relion-bin+mpi/usr/bin/relion_refine_mpi debian/relion-bin+mpi/usr/bin/relion_reconstruct debian/relion-bin+mpi/usr/bin/relion_autopick_mpi debian/relion-bin+mpi/usr/bin/relion_project debian/relion-bin+mpi/usr/bin/relion_autopick debian/relion-bin+mpi/usr/bin/relion_particle_sort debian/relion-bin+mpi/usr/bin/relion_run_ctffind debian/relion-bin+mpi/usr/bin/relion_postprocess debian/relion-bin+mpi/usr/bin/relion_preprocess_mpi debian/relion-bin+mpi/usr/bin/relion_particle_sort_mpi debian/relion-bin+mpi/usr/bin/relion_mask_create debian/relion-bin+mpi/usr/bin/relion_refine debian/relion-bin+mpi/usr/bin/relion_find_tiltpairs debian/relion-bin+mpi/usr/bin/relion_run_ctffind_mpi debian/relion-bin+mpi/usr/bin/relion_particle_polish were not linked against libhwloc.so.5 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+mpi/usr/bin/relion_image_handler debian/relion-bin+mpi/usr/bin/relion_particle_polish_mpi debian/relion-bin+mpi/usr/bin/relion_stack_create debian/relion-bin+mpi/usr/bin/relion_preprocess debian/relion-bin+mpi/usr/bin/relion_refine_mpi debian/relion-bin+mpi/usr/bin/relion_reconstruct debian/relion-bin+mpi/usr/bin/relion_autopick_mpi debian/relion-bin+mpi/usr/bin/relion_project debian/relion-bin+mpi/usr/bin/relion_autopick debian/relion-bin+mpi/usr/bin/relion_particle_sort debian/relion-bin+mpi/usr/bin/relion_run_ctffind debian/relion-bin+mpi/usr/bin/relion_postprocess debian/relion-bin+mpi/usr/bin/relion_preprocess_mpi debian/relion-bin+mpi/usr/bin/relion_particle_sort_mpi debian/relion-bin+mpi/usr/bin/relion_mask_create debian/relion-bin+mpi/usr/bin/relion_refine debian/relion-bin+mpi/usr/bin/relion_find_tiltpairs debian/relion-bin+mpi/usr/bin/relion_run_ctffind_mpi debian/relion-bin+mpi/usr/bin/relion_particle_polish were not linked against libfftw3.so.3 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+mpi/usr/bin/relion_image_handler debian/relion-bin+mpi/usr/bin/relion_particle_polish_mpi debian/relion-bin+mpi/usr/bin/relion_stack_create debian/relion-bin+mpi/usr/bin/relion_preprocess debian/relion-bin+mpi/usr/bin/relion_refine_mpi debian/relion-bin+mpi/usr/bin/relion_reconstruct debian/relion-bin+mpi/usr/bin/relion_autopick_mpi debian/relion-bin+mpi/usr/bin/relion_project debian/relion-bin+mpi/usr/bin/relion_autopick debian/relion-bin+mpi/usr/bin/relion_particle_sort debian/relion-bin+mpi/usr/bin/relion_run_ctffind debian/relion-bin+mpi/usr/bin/relion_postprocess debian/relion-bin+mpi/usr/bin/relion_preprocess_mpi debian/relion-bin+mpi/usr/bin/relion_particle_sort_mpi debian/relion-bin+mpi/usr/bin/relion_mask_create debian/relion-bin+mpi/usr/bin/relion_refine debian/relion-bin+mpi/usr/bin/relion_find_tiltpairs debian/relion-bin+mpi/usr/bin/relion_run_ctffind_mpi debian/relion-bin+mpi/usr/bin/relion_particle_polish were not linked against libdl.so.2 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: debian/relion-bin+gui/usr/bin/relion_manualpick contains an unresolvable reference to symbol _ZN12ManualPicker10initialiseEv: it's probably a plugin | |
| dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) | |
| dpkg-shlibdeps: warning: debian/relion-bin+gui/usr/bin/relion_maingui contains an unresolvable reference to symbol _ZN16RelionMainWindowC1EiiPKc: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+gui/usr/bin/relion_display contains an unresolvable reference to symbol _ZN9Displayer3runEv: it's probably a plugin | |
| dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+gui/usr/bin/relion_particle_polish debian/relion-bin+gui/usr/bin/relion_reconstruct debian/relion-bin+gui/usr/bin/relion_particle_sort debian/relion-bin+gui/usr/bin/relion_autopick debian/relion-bin+gui/usr/bin/relion_project debian/relion-bin+gui/usr/bin/relion_run_ctffind debian/relion-bin+gui/usr/bin/relion_manualpick debian/relion-bin+gui/usr/bin/relion_image_handler debian/relion-bin+gui/usr/bin/relion_postprocess debian/relion-bin+gui/usr/bin/relion_stack_create debian/relion-bin+gui/usr/bin/relion_refine debian/relion-bin+gui/usr/bin/relion_preprocess debian/relion-bin+gui/usr/bin/relion_maingui debian/relion-bin+gui/usr/bin/relion_display debian/relion-bin+gui/usr/bin/relion_find_tiltpairs debian/relion-bin+gui/usr/bin/relion_mask_create were not linked against libfftw3.so.3 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+gui/usr/bin/relion_particle_polish debian/relion-bin+gui/usr/bin/relion_reconstruct debian/relion-bin+gui/usr/bin/relion_particle_sort debian/relion-bin+gui/usr/bin/relion_autopick debian/relion-bin+gui/usr/bin/relion_project debian/relion-bin+gui/usr/bin/relion_run_ctffind debian/relion-bin+gui/usr/bin/relion_manualpick debian/relion-bin+gui/usr/bin/relion_image_handler debian/relion-bin+gui/usr/bin/relion_postprocess debian/relion-bin+gui/usr/bin/relion_stack_create debian/relion-bin+gui/usr/bin/relion_refine debian/relion-bin+gui/usr/bin/relion_preprocess debian/relion-bin+gui/usr/bin/relion_maingui debian/relion-bin+gui/usr/bin/relion_display debian/relion-bin+gui/usr/bin/relion_find_tiltpairs debian/relion-bin+gui/usr/bin/relion_mask_create were not linked against libfftw3_threads.so.3 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+gui/usr/bin/relion_particle_polish debian/relion-bin+gui/usr/bin/relion_reconstruct debian/relion-bin+gui/usr/bin/relion_particle_sort debian/relion-bin+gui/usr/bin/relion_autopick debian/relion-bin+gui/usr/bin/relion_project debian/relion-bin+gui/usr/bin/relion_run_ctffind debian/relion-bin+gui/usr/bin/relion_manualpick debian/relion-bin+gui/usr/bin/relion_image_handler debian/relion-bin+gui/usr/bin/relion_postprocess debian/relion-bin+gui/usr/bin/relion_stack_create debian/relion-bin+gui/usr/bin/relion_refine debian/relion-bin+gui/usr/bin/relion_preprocess debian/relion-bin+gui/usr/bin/relion_maingui debian/relion-bin+gui/usr/bin/relion_display debian/relion-bin+gui/usr/bin/relion_find_tiltpairs debian/relion-bin+gui/usr/bin/relion_mask_create were not linked against libX11.so.6 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi+gui/usr/bin/relion_refine_mpi contains an unresolvable reference to symbol _ZN7MpiNodeD1Ev: it's probably a plugin | |
| dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi+gui/usr/bin/relion_preprocess_mpi contains an unresolvable reference to symbol _ZN16PreprocessingMpi4readEiPPc: it's probably a plugin | |
| dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi+gui/usr/bin/relion_manualpick contains an unresolvable reference to symbol _ZN12ManualPicker10initialiseEv: it's probably a plugin | |
| dpkg-shlibdeps: warning: 3 other similar warnings have been skipped (use -v to see them all) | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi+gui/usr/bin/relion_autopick_mpi contains an unresolvable reference to symbol _ZN13AutoPickerMpi3runEv: it's probably a plugin | |
| dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind_mpi contains an unresolvable reference to symbol _ZN16CtffindRunnerMpi4readEiPPc: it's probably a plugin | |
| dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi+gui/usr/bin/relion_display contains an unresolvable reference to symbol _ZN9Displayer6runGuiEv: it's probably a plugin | |
| dpkg-shlibdeps: warning: 4 other similar warnings have been skipped (use -v to see them all) | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi+gui/usr/bin/relion_maingui contains an unresolvable reference to symbol _ZN16RelionMainWindowC1EiiPKc: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish_mpi contains an unresolvable reference to symbol _ZN19ParticlePolisherMpi3runEv: it's probably a plugin | |
| dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort_mpi contains an unresolvable reference to symbol _ZN17ParticleSorterMpi3runEv: it's probably a plugin | |
| dpkg-shlibdeps: warning: 2 other similar warnings have been skipped (use -v to see them all) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+mpi+gui/usr/bin/relion_refine_mpi debian/relion-bin+mpi+gui/usr/bin/relion_stack_create debian/relion-bin+mpi+gui/usr/bin/relion_preprocess_mpi debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort debian/relion-bin+mpi+gui/usr/bin/relion_project debian/relion-bin+mpi+gui/usr/bin/relion_image_handler debian/relion-bin+mpi+gui/usr/bin/relion_autopick debian/relion-bin+mpi+gui/usr/bin/relion_manualpick debian/relion-bin+mpi+gui/usr/bin/relion_autopick_mpi debian/relion-bin+mpi+gui/usr/bin/relion_preprocess debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind_mpi debian/relion-bin+mpi+gui/usr/bin/relion_display debian/relion-bin+mpi+gui/usr/bin/relion_maingui debian/relion-bin+mpi+gui/usr/bin/relion_refine debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish_mpi debian/relion-bin+mpi+gui/usr/bin/relion_find_tiltpairs debian/relion-bin+mpi+gui/usr/bin/relion_mask_create debian/relion-bin+mpi+gui/usr/bin/relion_reconstruct debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort_mpi debian/relion-bin+mpi+gui/usr/bin/relion_postprocess were not linked against libfftw3.so.3 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+mpi+gui/usr/bin/relion_refine_mpi debian/relion-bin+mpi+gui/usr/bin/relion_stack_create debian/relion-bin+mpi+gui/usr/bin/relion_preprocess_mpi debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort debian/relion-bin+mpi+gui/usr/bin/relion_project debian/relion-bin+mpi+gui/usr/bin/relion_image_handler debian/relion-bin+mpi+gui/usr/bin/relion_autopick debian/relion-bin+mpi+gui/usr/bin/relion_manualpick debian/relion-bin+mpi+gui/usr/bin/relion_autopick_mpi debian/relion-bin+mpi+gui/usr/bin/relion_preprocess debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind_mpi debian/relion-bin+mpi+gui/usr/bin/relion_display debian/relion-bin+mpi+gui/usr/bin/relion_maingui debian/relion-bin+mpi+gui/usr/bin/relion_refine debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish_mpi debian/relion-bin+mpi+gui/usr/bin/relion_find_tiltpairs debian/relion-bin+mpi+gui/usr/bin/relion_mask_create debian/relion-bin+mpi+gui/usr/bin/relion_reconstruct debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort_mpi debian/relion-bin+mpi+gui/usr/bin/relion_postprocess were not linked against libhwloc.so.5 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+mpi+gui/usr/bin/relion_refine_mpi debian/relion-bin+mpi+gui/usr/bin/relion_stack_create debian/relion-bin+mpi+gui/usr/bin/relion_preprocess_mpi debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort debian/relion-bin+mpi+gui/usr/bin/relion_project debian/relion-bin+mpi+gui/usr/bin/relion_image_handler debian/relion-bin+mpi+gui/usr/bin/relion_autopick debian/relion-bin+mpi+gui/usr/bin/relion_manualpick debian/relion-bin+mpi+gui/usr/bin/relion_autopick_mpi debian/relion-bin+mpi+gui/usr/bin/relion_preprocess debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind_mpi debian/relion-bin+mpi+gui/usr/bin/relion_display debian/relion-bin+mpi+gui/usr/bin/relion_maingui debian/relion-bin+mpi+gui/usr/bin/relion_refine debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish_mpi debian/relion-bin+mpi+gui/usr/bin/relion_find_tiltpairs debian/relion-bin+mpi+gui/usr/bin/relion_mask_create debian/relion-bin+mpi+gui/usr/bin/relion_reconstruct debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort_mpi debian/relion-bin+mpi+gui/usr/bin/relion_postprocess were not linked against libX11.so.6 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+mpi+gui/usr/bin/relion_refine_mpi debian/relion-bin+mpi+gui/usr/bin/relion_stack_create debian/relion-bin+mpi+gui/usr/bin/relion_preprocess_mpi debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort debian/relion-bin+mpi+gui/usr/bin/relion_project debian/relion-bin+mpi+gui/usr/bin/relion_image_handler debian/relion-bin+mpi+gui/usr/bin/relion_autopick debian/relion-bin+mpi+gui/usr/bin/relion_manualpick debian/relion-bin+mpi+gui/usr/bin/relion_autopick_mpi debian/relion-bin+mpi+gui/usr/bin/relion_preprocess debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind_mpi debian/relion-bin+mpi+gui/usr/bin/relion_display debian/relion-bin+mpi+gui/usr/bin/relion_maingui debian/relion-bin+mpi+gui/usr/bin/relion_refine debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish_mpi debian/relion-bin+mpi+gui/usr/bin/relion_find_tiltpairs debian/relion-bin+mpi+gui/usr/bin/relion_mask_create debian/relion-bin+mpi+gui/usr/bin/relion_reconstruct debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort_mpi debian/relion-bin+mpi+gui/usr/bin/relion_postprocess were not linked against libdl.so.2 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+mpi+gui/usr/bin/relion_refine_mpi debian/relion-bin+mpi+gui/usr/bin/relion_stack_create debian/relion-bin+mpi+gui/usr/bin/relion_preprocess_mpi debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort debian/relion-bin+mpi+gui/usr/bin/relion_project debian/relion-bin+mpi+gui/usr/bin/relion_image_handler debian/relion-bin+mpi+gui/usr/bin/relion_autopick debian/relion-bin+mpi+gui/usr/bin/relion_manualpick debian/relion-bin+mpi+gui/usr/bin/relion_autopick_mpi debian/relion-bin+mpi+gui/usr/bin/relion_preprocess debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind_mpi debian/relion-bin+mpi+gui/usr/bin/relion_display debian/relion-bin+mpi+gui/usr/bin/relion_maingui debian/relion-bin+mpi+gui/usr/bin/relion_refine debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish_mpi debian/relion-bin+mpi+gui/usr/bin/relion_find_tiltpairs debian/relion-bin+mpi+gui/usr/bin/relion_mask_create debian/relion-bin+mpi+gui/usr/bin/relion_reconstruct debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort_mpi debian/relion-bin+mpi+gui/usr/bin/relion_postprocess were not linked against libfftw3_threads.so.3 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: symbol pthread_create used by debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: symbol pthread_join used by debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: symbol ompi_mpi_errors_return used by debian/librelion+mpi-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: symbol MPI_Op_free used by debian/librelion+mpi-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: symbol MPI_Alltoallv used by debian/librelion+mpi-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: symbol MPI_Type_size used by debian/librelion+mpi-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: symbol MPI_Type_set_attr used by debian/librelion+mpi-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: symbol MPI_Attr_get used by debian/librelion+mpi-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: symbol MPI_Probe used by debian/librelion+mpi-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: symbol MPI_Type_set_name used by debian/librelion+mpi-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: symbol MPI_Status_set_cancelled used by debian/librelion+mpi-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: symbol MPI_Status_set_elements used by debian/librelion+mpi-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: 164 other similar warnings have been skipped (use -v to see them all) | |
| dpkg-shlibdeps: warning: symbol pthread_join used by debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: symbol pthread_create used by debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 was not linked against libX11.so.6 (it uses none of the library's symbols) | |
| dpkg-shlibdeps: warning: symbol MPI_Type_size used by debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: symbol MPI_Comm_free used by debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: symbol MPI_Pack_size used by debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: symbol _ZN3MPI4CommC2Ev used by debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: symbol MPI_Cart_sub used by debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: symbol MPI_Wait used by debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: symbol MPI_Type_create_resized used by debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: symbol MPI_Unpack_external used by debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: symbol MPI_Alltoallv used by debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: symbol MPI_Info_set used by debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 found in none of the libraries | |
| dpkg-shlibdeps: warning: 164 other similar warnings have been skipped (use -v to see them all) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1.0.3 was not linked against libX11.so.6 (it uses none of the library's symbols) | |
| # Now for the relion-bin* packages | |
| set -x; for pkg in relion-bin relion-bin+mpi relion-bin+gui relion-bin+mpi+gui ; do \ | |
| echo -e "\n-- Info: Run dpkg-shlibdeps for $pkg --\n"; \ | |
| dpkg-shlibdeps -v -e debian/${pkg}/usr/bin/relion_* \ | |
| -Sdebian/librelion${pkg#relion-bin}-1.3-1 \ | |
| -Tdebian/${pkg}.substvars; \ | |
| done | |
| + echo -e \n-- Info: Run dpkg-shlibdeps for relion-bin --\n | |
| -e | |
| -- Info: Run dpkg-shlibdeps for relion-bin -- | |
| + dpkg-shlibdeps -v -e debian/relion-bin/usr/bin/relion_autopick debian/relion-bin/usr/bin/relion_find_tiltpairs debian/relion-bin/usr/bin/relion_image_handler debian/relion-bin/usr/bin/relion_mask_create debian/relion-bin/usr/bin/relion_particle_polish debian/relion-bin/usr/bin/relion_particle_sort debian/relion-bin/usr/bin/relion_postprocess debian/relion-bin/usr/bin/relion_preprocess debian/relion-bin/usr/bin/relion_project debian/relion-bin/usr/bin/relion_reconstruct debian/relion-bin/usr/bin/relion_refine debian/relion-bin/usr/bin/relion_run_ctffind debian/relion-bin/usr/bin/relion_stack_create debian/relion-bin/usr/bin/relion_star_datablock_ctfdat debian/relion-bin/usr/bin/relion_star_datablock_singlefiles debian/relion-bin/usr/bin/relion_star_datablock_stack debian/relion-bin/usr/bin/relion_star_loopheader debian/relion-bin/usr/bin/relion_star_plottable debian/relion-bin/usr/bin/relion_star_printtable -Sdebian/librelion-1.3-1 -Tdebian/relion-bin.substvars | |
| >> Scanning debian/relion-bin/usr/bin/relion_stack_create (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| >> Scanning debian/relion-bin/usr/bin/relion_autopick (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| >> Scanning debian/relion-bin/usr/bin/relion_mask_create (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| >> Scanning debian/relion-bin/usr/bin/relion_star_datablock_stack (for Depends field) | |
| objdump: debian/relion-bin/usr/bin/relion_star_datablock_stack: File format not recognized | |
| >> Scanning debian/relion-bin/usr/bin/relion_preprocess (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| >> Scanning debian/relion-bin/usr/bin/relion_project (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| dpkg-shlibdeps: warning: binaries to analyze should already be installed in their package's directory | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| >> Scanning (for Depends field) | |
| >> Scanning debian/relion-bin/usr/bin/relion_image_handler (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| >> Scanning debian/relion-bin/usr/bin/relion_run_ctffind (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| >> Scanning debian/relion-bin/usr/bin/relion_postprocess (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| >> Scanning debian/relion-bin/usr/bin/relion_particle_sort (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| >> Scanning debian/relion-bin/usr/bin/relion_find_tiltpairs (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| >> Scanning debian/relion-bin/usr/bin/relion_reconstruct (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| >> Scanning debian/relion-bin/usr/bin/relion_refine (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| >> Scanning debian/relion-bin/usr/bin/relion_star_loopheader (for Depends field) | |
| objdump: debian/relion-bin/usr/bin/relion_star_loopheader: File format not recognized | |
| >> Scanning debian/relion-bin/usr/bin/relion_star_printtable (for Depends field) | |
| objdump: debian/relion-bin/usr/bin/relion_star_printtable: File format not recognized | |
| >> Scanning debian/relion-bin/usr/bin/relion_star_plottable (for Depends field) | |
| objdump: debian/relion-bin/usr/bin/relion_star_plottable: File format not recognized | |
| >> Scanning debian/relion-bin/usr/bin/relion_star_datablock_ctfdat (for Depends field) | |
| objdump: debian/relion-bin/usr/bin/relion_star_datablock_ctfdat: File format not recognized | |
| >> Scanning debian/relion-bin/usr/bin/relion_star_datablock_singlefiles (for Depends field) | |
| objdump: debian/relion-bin/usr/bin/relion_star_datablock_singlefiles: File format not recognized | |
| >> Scanning debian/relion-bin/usr/bin/relion_particle_polish (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin/usr/bin/relion_stack_create debian/relion-bin/usr/bin/relion_autopick debian/relion-bin/usr/bin/relion_mask_create debian/relion-bin/usr/bin/relion_preprocess debian/relion-bin/usr/bin/relion_project debian/relion-bin/usr/bin/relion_image_handler debian/relion-bin/usr/bin/relion_run_ctffind debian/relion-bin/usr/bin/relion_postprocess debian/relion-bin/usr/bin/relion_particle_sort debian/relion-bin/usr/bin/relion_find_tiltpairs debian/relion-bin/usr/bin/relion_reconstruct debian/relion-bin/usr/bin/relion_refine debian/relion-bin/usr/bin/relion_particle_polish were not linked against libfftw3.so.3 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin/usr/bin/relion_stack_create debian/relion-bin/usr/bin/relion_autopick debian/relion-bin/usr/bin/relion_mask_create debian/relion-bin/usr/bin/relion_preprocess debian/relion-bin/usr/bin/relion_project debian/relion-bin/usr/bin/relion_image_handler debian/relion-bin/usr/bin/relion_run_ctffind debian/relion-bin/usr/bin/relion_postprocess debian/relion-bin/usr/bin/relion_particle_sort debian/relion-bin/usr/bin/relion_find_tiltpairs debian/relion-bin/usr/bin/relion_reconstruct debian/relion-bin/usr/bin/relion_refine debian/relion-bin/usr/bin/relion_particle_polish were not linked against libfftw3_threads.so.3 (they use none of the library's symbols) | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| + echo -e \n-- Info: Run dpkg-shlibdeps for relion-bin+mpi --\n | |
| -e | |
| -- Info: Run dpkg-shlibdeps for relion-bin+mpi -- | |
| + dpkg-shlibdeps -v -e debian/relion-bin+mpi/usr/bin/relion_autopick debian/relion-bin+mpi/usr/bin/relion_autopick_mpi debian/relion-bin+mpi/usr/bin/relion_find_tiltpairs debian/relion-bin+mpi/usr/bin/relion_image_handler debian/relion-bin+mpi/usr/bin/relion_mask_create debian/relion-bin+mpi/usr/bin/relion_particle_polish debian/relion-bin+mpi/usr/bin/relion_particle_polish_mpi debian/relion-bin+mpi/usr/bin/relion_particle_sort debian/relion-bin+mpi/usr/bin/relion_particle_sort_mpi debian/relion-bin+mpi/usr/bin/relion_postprocess debian/relion-bin+mpi/usr/bin/relion_preprocess debian/relion-bin+mpi/usr/bin/relion_preprocess_mpi debian/relion-bin+mpi/usr/bin/relion_project debian/relion-bin+mpi/usr/bin/relion_reconstruct debian/relion-bin+mpi/usr/bin/relion_refine debian/relion-bin+mpi/usr/bin/relion_refine_mpi debian/relion-bin+mpi/usr/bin/relion_run_ctffind debian/relion-bin+mpi/usr/bin/relion_run_ctffind_mpi debian/relion-bin+mpi/usr/bin/relion_stack_create debian/relion-bin+mpi/usr/bin/relion_star_datablock_ctfdat debian/relion-bin+mpi/usr/bin/relion_star_datablock_singlefiles debian/relion-bin+mpi/usr/bin/relion_star_datablock_stack debian/relion-bin+mpi/usr/bin/relion_star_loopheader debian/relion-bin+mpi/usr/bin/relion_star_plottable debian/relion-bin+mpi/usr/bin/relion_star_printtable -Sdebian/librelion+mpi-1.3-1 -Tdebian/relion-bin+mpi.substvars | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_star_datablock_stack (for Depends field) | |
| objdump: debian/relion-bin+mpi/usr/bin/relion_star_datablock_stack: File format not recognized | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_star_loopheader (for Depends field) | |
| objdump: debian/relion-bin+mpi/usr/bin/relion_star_loopheader: File format not recognized | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_reconstruct (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| No associated package found for debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+gui-1.3-1v5 in debian/librelion+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_image_handler (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| No associated package found for debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+gui-1.3-1v5 in debian/librelion+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_star_printtable (for Depends field) | |
| objdump: debian/relion-bin+mpi/usr/bin/relion_star_printtable: File format not recognized | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_autopick_mpi (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| No associated package found for debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+gui-1.3-1v5 in debian/librelion+gui-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_autopick_mpi contains an unresolvable reference to symbol _ZN13AutoPickerMpi4readEiPPc: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_autopick_mpi contains an unresolvable reference to symbol _ZN7MpiNodeD1Ev: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_autopick_mpi contains an unresolvable reference to symbol _ZN13AutoPickerMpi3runEv: it's probably a plugin | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_preprocess_mpi (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| No associated package found for debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+gui-1.3-1v5 in debian/librelion+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_preprocess_mpi contains an unresolvable reference to symbol _ZN16PreprocessingMpi3runEv: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_preprocess_mpi contains an unresolvable reference to symbol _ZN7MpiNodeD1Ev: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_preprocess_mpi contains an unresolvable reference to symbol _ZN16PreprocessingMpi4readEiPPc: it's probably a plugin | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_refine_mpi (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| No associated package found for debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+gui-1.3-1v5 in debian/librelion+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_refine_mpi contains an unresolvable reference to symbol _ZN14MlOptimiserMpi7iterateEv: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_refine_mpi contains an unresolvable reference to symbol _ZN14MlOptimiserMpi4readEiPPc: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_refine_mpi contains an unresolvable reference to symbol _ZN14MlOptimiserMpi10initialiseEv: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_refine_mpi contains an unresolvable reference to symbol _ZN7MpiNodeD1Ev: it's probably a plugin | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_particle_sort (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| No associated package found for debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+gui-1.3-1v5 in debian/librelion+gui-1.3-1v5/DEBIAN/shlibs | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_star_plottable (for Depends field) | |
| objdump: debian/relion-bin+mpi/usr/bin/relion_star_plottable: File format not recognized | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_stack_create (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| No associated package found for debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+gui-1.3-1v5 in debian/librelion+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_postprocess (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| No associated package found for debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+gui-1.3-1v5 in debian/librelion+gui-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_particle_polish_mpi (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| No associated package found for debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+gui-1.3-1v5 in debian/librelion+gui-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_particle_polish_mpi contains an unresolvable reference to symbol _ZN7MpiNodeD1Ev: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_particle_polish_mpi contains an unresolvable reference to symbol _ZN19ParticlePolisherMpi3runEv: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_particle_polish_mpi contains an unresolvable reference to symbol _ZN19ParticlePolisherMpi4readEiPPc: it's probably a plugin | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_mask_create (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| No associated package found for debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+gui-1.3-1v5 in debian/librelion+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_run_ctffind_mpi (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| No associated package found for debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+gui-1.3-1v5 in debian/librelion+gui-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_run_ctffind_mpi contains an unresolvable reference to symbol _ZN16CtffindRunnerMpi3runEv: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_run_ctffind_mpi contains an unresolvable reference to symbol _ZN16CtffindRunnerMpi4readEiPPc: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_run_ctffind_mpi contains an unresolvable reference to symbol _ZN7MpiNodeD1Ev: it's probably a plugin | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_star_datablock_singlefiles (for Depends field) | |
| objdump: debian/relion-bin+mpi/usr/bin/relion_star_datablock_singlefiles: File format not recognized | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_particle_polish (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| No associated package found for debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+gui-1.3-1v5 in debian/librelion+gui-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_star_datablock_ctfdat (for Depends field) | |
| objdump: debian/relion-bin+mpi/usr/bin/relion_star_datablock_ctfdat: File format not recognized | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_find_tiltpairs (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| No associated package found for debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+gui-1.3-1v5 in debian/librelion+gui-1.3-1v5/DEBIAN/shlibs | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_particle_sort_mpi (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| No associated package found for debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+gui-1.3-1v5 in debian/librelion+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_particle_sort_mpi contains an unresolvable reference to symbol _ZN7MpiNodeD1Ev: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_particle_sort_mpi contains an unresolvable reference to symbol _ZN17ParticleSorterMpi4readEiPPc: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+mpi/usr/bin/relion_particle_sort_mpi contains an unresolvable reference to symbol _ZN17ParticleSorterMpi3runEv: it's probably a plugin | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_run_ctffind (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| dpkg-shlibdeps: warning: binaries to analyze should already be installed in their package's directory | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| No associated package found for debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+gui-1.3-1v5 in debian/librelion+gui-1.3-1v5/DEBIAN/shlibs | |
| >> Scanning (for Depends field) | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_autopick (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| No associated package found for debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+gui-1.3-1v5 in debian/librelion+gui-1.3-1v5/DEBIAN/shlibs | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_project (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| No associated package found for debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+gui-1.3-1v5 in debian/librelion+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_refine (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| No associated package found for debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+gui-1.3-1v5 in debian/librelion+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| >> Scanning debian/relion-bin+mpi/usr/bin/relion_preprocess (for Depends field) | |
| Library librelion-1.3.so.1 found in debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| No associated package found for debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+gui-1.3-1v5 in debian/librelion+gui-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+mpi/usr/bin/relion_reconstruct debian/relion-bin+mpi/usr/bin/relion_image_handler debian/relion-bin+mpi/usr/bin/relion_autopick_mpi debian/relion-bin+mpi/usr/bin/relion_preprocess_mpi debian/relion-bin+mpi/usr/bin/relion_refine_mpi debian/relion-bin+mpi/usr/bin/relion_particle_sort debian/relion-bin+mpi/usr/bin/relion_stack_create debian/relion-bin+mpi/usr/bin/relion_postprocess debian/relion-bin+mpi/usr/bin/relion_particle_polish_mpi debian/relion-bin+mpi/usr/bin/relion_mask_create debian/relion-bin+mpi/usr/bin/relion_run_ctffind_mpi debian/relion-bin+mpi/usr/bin/relion_particle_polish debian/relion-bin+mpi/usr/bin/relion_find_tiltpairs debian/relion-bin+mpi/usr/bin/relion_particle_sort_mpi debian/relion-bin+mpi/usr/bin/relion_run_ctffind debian/relion-bin+mpi/usr/bin/relion_autopick debian/relion-bin+mpi/usr/bin/relion_project debian/relion-bin+mpi/usr/bin/relion_refine debian/relion-bin+mpi/usr/bin/relion_preprocess were not linked against libfftw3_threads.so.3 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+mpi/usr/bin/relion_reconstruct debian/relion-bin+mpi/usr/bin/relion_image_handler debian/relion-bin+mpi/usr/bin/relion_autopick_mpi debian/relion-bin+mpi/usr/bin/relion_preprocess_mpi debian/relion-bin+mpi/usr/bin/relion_refine_mpi debian/relion-bin+mpi/usr/bin/relion_particle_sort debian/relion-bin+mpi/usr/bin/relion_stack_create debian/relion-bin+mpi/usr/bin/relion_postprocess debian/relion-bin+mpi/usr/bin/relion_particle_polish_mpi debian/relion-bin+mpi/usr/bin/relion_mask_create debian/relion-bin+mpi/usr/bin/relion_run_ctffind_mpi debian/relion-bin+mpi/usr/bin/relion_particle_polish debian/relion-bin+mpi/usr/bin/relion_find_tiltpairs debian/relion-bin+mpi/usr/bin/relion_particle_sort_mpi debian/relion-bin+mpi/usr/bin/relion_run_ctffind debian/relion-bin+mpi/usr/bin/relion_autopick debian/relion-bin+mpi/usr/bin/relion_project debian/relion-bin+mpi/usr/bin/relion_refine debian/relion-bin+mpi/usr/bin/relion_preprocess were not linked against libfftw3.so.3 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+mpi/usr/bin/relion_reconstruct debian/relion-bin+mpi/usr/bin/relion_image_handler debian/relion-bin+mpi/usr/bin/relion_autopick_mpi debian/relion-bin+mpi/usr/bin/relion_preprocess_mpi debian/relion-bin+mpi/usr/bin/relion_refine_mpi debian/relion-bin+mpi/usr/bin/relion_particle_sort debian/relion-bin+mpi/usr/bin/relion_stack_create debian/relion-bin+mpi/usr/bin/relion_postprocess debian/relion-bin+mpi/usr/bin/relion_particle_polish_mpi debian/relion-bin+mpi/usr/bin/relion_mask_create debian/relion-bin+mpi/usr/bin/relion_run_ctffind_mpi debian/relion-bin+mpi/usr/bin/relion_particle_polish debian/relion-bin+mpi/usr/bin/relion_find_tiltpairs debian/relion-bin+mpi/usr/bin/relion_particle_sort_mpi debian/relion-bin+mpi/usr/bin/relion_run_ctffind debian/relion-bin+mpi/usr/bin/relion_autopick debian/relion-bin+mpi/usr/bin/relion_project debian/relion-bin+mpi/usr/bin/relion_refine debian/relion-bin+mpi/usr/bin/relion_preprocess were not linked against libdl.so.2 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+mpi/usr/bin/relion_reconstruct debian/relion-bin+mpi/usr/bin/relion_image_handler debian/relion-bin+mpi/usr/bin/relion_autopick_mpi debian/relion-bin+mpi/usr/bin/relion_preprocess_mpi debian/relion-bin+mpi/usr/bin/relion_refine_mpi debian/relion-bin+mpi/usr/bin/relion_particle_sort debian/relion-bin+mpi/usr/bin/relion_stack_create debian/relion-bin+mpi/usr/bin/relion_postprocess debian/relion-bin+mpi/usr/bin/relion_particle_polish_mpi debian/relion-bin+mpi/usr/bin/relion_mask_create debian/relion-bin+mpi/usr/bin/relion_run_ctffind_mpi debian/relion-bin+mpi/usr/bin/relion_particle_polish debian/relion-bin+mpi/usr/bin/relion_find_tiltpairs debian/relion-bin+mpi/usr/bin/relion_particle_sort_mpi debian/relion-bin+mpi/usr/bin/relion_run_ctffind debian/relion-bin+mpi/usr/bin/relion_autopick debian/relion-bin+mpi/usr/bin/relion_project debian/relion-bin+mpi/usr/bin/relion_refine debian/relion-bin+mpi/usr/bin/relion_preprocess were not linked against libhwloc.so.5 (they use none of the library's symbols) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| + echo -e \n-- Info: Run dpkg-shlibdeps for relion-bin+gui --\n | |
| -e | |
| -- Info: Run dpkg-shlibdeps for relion-bin+gui -- | |
| + dpkg-shlibdeps -v -e debian/relion-bin+gui/usr/bin/relion_autopick debian/relion-bin+gui/usr/bin/relion_display debian/relion-bin+gui/usr/bin/relion_find_tiltpairs debian/relion-bin+gui/usr/bin/relion_image_handler debian/relion-bin+gui/usr/bin/relion_maingui debian/relion-bin+gui/usr/bin/relion_manualpick debian/relion-bin+gui/usr/bin/relion_mask_create debian/relion-bin+gui/usr/bin/relion_particle_polish debian/relion-bin+gui/usr/bin/relion_particle_sort debian/relion-bin+gui/usr/bin/relion_postprocess debian/relion-bin+gui/usr/bin/relion_preprocess debian/relion-bin+gui/usr/bin/relion_project debian/relion-bin+gui/usr/bin/relion_reconstruct debian/relion-bin+gui/usr/bin/relion_refine debian/relion-bin+gui/usr/bin/relion_run_ctffind debian/relion-bin+gui/usr/bin/relion_stack_create debian/relion-bin+gui/usr/bin/relion_star_datablock_ctfdat debian/relion-bin+gui/usr/bin/relion_star_datablock_singlefiles debian/relion-bin+gui/usr/bin/relion_star_datablock_stack debian/relion-bin+gui/usr/bin/relion_star_loopheader debian/relion-bin+gui/usr/bin/relion_star_plottable debian/relion-bin+gui/usr/bin/relion_star_printtable -Sdebian/librelion+gui-1.3-1 -Tdebian/relion-bin+gui.substvars | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_project (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_star_datablock_stack (for Depends field) | |
| objdump: debian/relion-bin+gui/usr/bin/relion_star_datablock_stack: File format not recognized | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_display (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| dpkg-shlibdeps: warning: debian/relion-bin+gui/usr/bin/relion_display contains an unresolvable reference to symbol _ZN9Displayer3runEv: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+gui/usr/bin/relion_display contains an unresolvable reference to symbol _ZN9Displayer10initialiseEv: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+gui/usr/bin/relion_display contains an unresolvable reference to symbol _ZN9Displayer6runGuiEv: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+gui/usr/bin/relion_display contains an unresolvable reference to symbol _ZN9Displayer5usageEv: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+gui/usr/bin/relion_display contains an unresolvable reference to symbol _ZN9Displayer4readEiPPc: it's probably a plugin | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_refine (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_star_datablock_singlefiles (for Depends field) | |
| objdump: debian/relion-bin+gui/usr/bin/relion_star_datablock_singlefiles: File format not recognized | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_particle_sort (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_stack_create (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_postprocess (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_manualpick (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| dpkg-shlibdeps: warning: debian/relion-bin+gui/usr/bin/relion_manualpick contains an unresolvable reference to symbol _ZN12ManualPicker10initialiseEv: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+gui/usr/bin/relion_manualpick contains an unresolvable reference to symbol _ZN12ManualPicker3runEv: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+gui/usr/bin/relion_manualpick contains an unresolvable reference to symbol _ZN12ManualPicker5usageEv: it's probably a plugin | |
| dpkg-shlibdeps: warning: debian/relion-bin+gui/usr/bin/relion_manualpick contains an unresolvable reference to symbol _ZN12ManualPicker4readEiPPc: it's probably a plugin | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_find_tiltpairs (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_maingui (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| dpkg-shlibdeps: warning: debian/relion-bin+gui/usr/bin/relion_maingui contains an unresolvable reference to symbol _ZN16RelionMainWindowC1EiiPKc: it's probably a plugin | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_star_datablock_ctfdat (for Depends field) | |
| objdump: debian/relion-bin+gui/usr/bin/relion_star_datablock_ctfdat: File format not recognized | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_reconstruct (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_particle_polish (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_star_loopheader (for Depends field) | |
| objdump: debian/relion-bin+gui/usr/bin/relion_star_loopheader: File format not recognized | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_mask_create (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_autopick (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_star_plottable (for Depends field) | |
| objdump: debian/relion-bin+gui/usr/bin/relion_star_plottable: File format not recognized | |
| dpkg-shlibdeps: warning: binaries to analyze should already be installed in their package's directory | |
| >> Scanning (for Depends field) | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_run_ctffind (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_preprocess (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_image_handler (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| No associated package found for debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion-1.3-1v5 in debian/librelion-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+gui/usr/bin/relion_star_printtable (for Depends field) | |
| objdump: debian/relion-bin+gui/usr/bin/relion_star_printtable: File format not recognized | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+gui/usr/bin/relion_project debian/relion-bin+gui/usr/bin/relion_display debian/relion-bin+gui/usr/bin/relion_refine debian/relion-bin+gui/usr/bin/relion_particle_sort debian/relion-bin+gui/usr/bin/relion_stack_create debian/relion-bin+gui/usr/bin/relion_postprocess debian/relion-bin+gui/usr/bin/relion_manualpick debian/relion-bin+gui/usr/bin/relion_find_tiltpairs debian/relion-bin+gui/usr/bin/relion_maingui debian/relion-bin+gui/usr/bin/relion_reconstruct debian/relion-bin+gui/usr/bin/relion_particle_polish debian/relion-bin+gui/usr/bin/relion_mask_create debian/relion-bin+gui/usr/bin/relion_autopick debian/relion-bin+gui/usr/bin/relion_run_ctffind debian/relion-bin+gui/usr/bin/relion_preprocess debian/relion-bin+gui/usr/bin/relion_image_handler were not linked against libfftw3.so.3 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+gui/usr/bin/relion_project debian/relion-bin+gui/usr/bin/relion_display debian/relion-bin+gui/usr/bin/relion_refine debian/relion-bin+gui/usr/bin/relion_particle_sort debian/relion-bin+gui/usr/bin/relion_stack_create debian/relion-bin+gui/usr/bin/relion_postprocess debian/relion-bin+gui/usr/bin/relion_manualpick debian/relion-bin+gui/usr/bin/relion_find_tiltpairs debian/relion-bin+gui/usr/bin/relion_maingui debian/relion-bin+gui/usr/bin/relion_reconstruct debian/relion-bin+gui/usr/bin/relion_particle_polish debian/relion-bin+gui/usr/bin/relion_mask_create debian/relion-bin+gui/usr/bin/relion_autopick debian/relion-bin+gui/usr/bin/relion_run_ctffind debian/relion-bin+gui/usr/bin/relion_preprocess debian/relion-bin+gui/usr/bin/relion_image_handler were not linked against libX11.so.6 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+gui/usr/bin/relion_project debian/relion-bin+gui/usr/bin/relion_display debian/relion-bin+gui/usr/bin/relion_refine debian/relion-bin+gui/usr/bin/relion_particle_sort debian/relion-bin+gui/usr/bin/relion_stack_create debian/relion-bin+gui/usr/bin/relion_postprocess debian/relion-bin+gui/usr/bin/relion_manualpick debian/relion-bin+gui/usr/bin/relion_find_tiltpairs debian/relion-bin+gui/usr/bin/relion_maingui debian/relion-bin+gui/usr/bin/relion_reconstruct debian/relion-bin+gui/usr/bin/relion_particle_polish debian/relion-bin+gui/usr/bin/relion_mask_create debian/relion-bin+gui/usr/bin/relion_autopick debian/relion-bin+gui/usr/bin/relion_run_ctffind debian/relion-bin+gui/usr/bin/relion_preprocess debian/relion-bin+gui/usr/bin/relion_image_handler were not linked against libfftw3_threads.so.3 (they use none of the library's symbols) | |
| + echo -e \n-- Info: Run dpkg-shlibdeps for relion-bin+mpi+gui --\n | |
| -e | |
| -- Info: Run dpkg-shlibdeps for relion-bin+mpi+gui -- | |
| + dpkg-shlibdeps -v -e debian/relion-bin+mpi+gui/usr/bin/relion_autopick debian/relion-bin+mpi+gui/usr/bin/relion_autopick_mpi debian/relion-bin+mpi+gui/usr/bin/relion_display debian/relion-bin+mpi+gui/usr/bin/relion_find_tiltpairs debian/relion-bin+mpi+gui/usr/bin/relion_image_handler debian/relion-bin+mpi+gui/usr/bin/relion_maingui debian/relion-bin+mpi+gui/usr/bin/relion_manualpick debian/relion-bin+mpi+gui/usr/bin/relion_mask_create debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish_mpi debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort_mpi debian/relion-bin+mpi+gui/usr/bin/relion_postprocess debian/relion-bin+mpi+gui/usr/bin/relion_preprocess debian/relion-bin+mpi+gui/usr/bin/relion_preprocess_mpi debian/relion-bin+mpi+gui/usr/bin/relion_project debian/relion-bin+mpi+gui/usr/bin/relion_reconstruct debian/relion-bin+mpi+gui/usr/bin/relion_refine debian/relion-bin+mpi+gui/usr/bin/relion_refine_mpi debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind_mpi debian/relion-bin+mpi+gui/usr/bin/relion_stack_create debian/relion-bin+mpi+gui/usr/bin/relion_star_datablock_ctfdat debian/relion-bin+mpi+gui/usr/bin/relion_star_datablock_singlefiles debian/relion-bin+mpi+gui/usr/bin/relion_star_datablock_stack debian/relion-bin+mpi+gui/usr/bin/relion_star_loopheader debian/relion-bin+mpi+gui/usr/bin/relion_star_plottable debian/relion-bin+mpi+gui/usr/bin/relion_star_printtable -Sdebian/librelion+mpi+gui-1.3-1 -Tdebian/relion-bin+mpi+gui.substvars | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_manualpick (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_refine_mpi (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_preprocess (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_star_datablock_ctfdat (for Depends field) | |
| objdump: debian/relion-bin+mpi+gui/usr/bin/relion_star_datablock_ctfdat: File format not recognized | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish_mpi (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_mask_create (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_maingui (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_project (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_star_loopheader (for Depends field) | |
| objdump: debian/relion-bin+mpi+gui/usr/bin/relion_star_loopheader: File format not recognized | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_stack_create (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_star_printtable (for Depends field) | |
| objdump: debian/relion-bin+mpi+gui/usr/bin/relion_star_printtable: File format not recognized | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_star_datablock_singlefiles (for Depends field) | |
| objdump: debian/relion-bin+mpi+gui/usr/bin/relion_star_datablock_singlefiles: File format not recognized | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_autopick (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_refine (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_star_plottable (for Depends field) | |
| objdump: debian/relion-bin+mpi+gui/usr/bin/relion_star_plottable: File format not recognized | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort_mpi (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_image_handler (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| dpkg-shlibdeps: warning: binaries to analyze should already be installed in their package's directory | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning (for Depends field) | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_star_datablock_stack (for Depends field) | |
| objdump: debian/relion-bin+mpi+gui/usr/bin/relion_star_datablock_stack: File format not recognized | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_autopick_mpi (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_postprocess (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_find_tiltpairs (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_preprocess_mpi (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind_mpi (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_reconstruct (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| >> Scanning debian/relion-bin+mpi+gui/usr/bin/relion_display (for Depends field) | |
| Library libfltk.so.1.3 found in /usr/lib/x86_64-linux-gnu/libfltk.so.1.3 | |
| Library libX11.so.6 found in /usr/lib/x86_64-linux-gnu/libX11.so.6 | |
| Library librelion-1.3.so.1 found in debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Library libfftw3_threads.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3 | |
| Library libfftw3.so.3 found in /usr/lib/x86_64-linux-gnu/libfftw3.so.3 | |
| Library libmpi_cxx.so.1 found in /usr/lib/libmpi_cxx.so.1 | |
| Library libmpi.so.1 found in /usr/lib/libmpi.so.1 | |
| Library libdl.so.2 found in /lib/x86_64-linux-gnu/libdl.so.2 | |
| Library libhwloc.so.5 found in /usr/lib/x86_64-linux-gnu/libhwloc.so.5 | |
| Library libstdc++.so.6 found in /usr/lib/x86_64-linux-gnu/libstdc++.so.6 | |
| Library libm.so.6 found in /lib/x86_64-linux-gnu/libm.so.6 | |
| Library libgcc_s.so.1 found in /lib/x86_64-linux-gnu/libgcc_s.so.1 | |
| Library libpthread.so.0 found in /lib/x86_64-linux-gnu/libpthread.so.0 | |
| Library libc.so.6 found in /lib/x86_64-linux-gnu/libc.so.6 | |
| Using shlibs+objdump for libfftw3.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3.so.3) | |
| Looking up shlibs dependency of libfftw3.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libfltk1.3:amd64.symbols for libfltk.so.1.3 | |
| Using shlibs+objdump for libfftw3_threads.so.3 (file /usr/lib/x86_64-linux-gnu/libfftw3_threads.so.3) | |
| Looking up shlibs dependency of libfftw3_threads.so.3 provided by 'libfftw3-double3:amd64' | |
| Found libfftw3-double3 in /var/lib/dpkg/info/libfftw3-double3:amd64.shlibs | |
| Using symbols file /var/lib/dpkg/info/libstdc++6:amd64.symbols for libstdc++.so.6 | |
| Using shlibs+objdump for libmpi.so.1 (file /usr/lib/libmpi.so.1) | |
| Looking up shlibs dependency of libmpi.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libdl.so.2 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libpthread.so.0 | |
| Using symbols file /var/lib/dpkg/info/libx11-6:amd64.symbols for libX11.so.6 | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libc.so.6 | |
| Using shlibs+objdump for libmpi_cxx.so.1 (file /usr/lib/libmpi_cxx.so.1) | |
| Looking up shlibs dependency of libmpi_cxx.so.1 provided by 'libopenmpi1.6' | |
| Found libopenmpi1.6 in /var/lib/dpkg/info/libopenmpi1.6.shlibs | |
| Using symbols file /var/lib/dpkg/info/libc6:amd64.symbols for libm.so.6 | |
| Using symbols file /var/lib/dpkg/info/libgcc1:amd64.symbols for libgcc_s.so.1 | |
| No associated package found for debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1 | |
| Using shlibs+objdump for librelion-1.3.so.1 (file debian/librelion+mpi+gui-1.3-1v5/usr/lib/x86_64-linux-gnu/librelion-1.3.so.1) | |
| Looking up shlibs dependency of librelion-1.3.so.1 provided by '' | |
| Found librelion+mpi+gui-1.3-1v5 in debian/librelion+mpi+gui-1.3-1v5/DEBIAN/shlibs | |
| Using shlibs+objdump for libhwloc.so.5 (file /usr/lib/x86_64-linux-gnu/libhwloc.so.5) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+mpi+gui/usr/bin/relion_manualpick debian/relion-bin+mpi+gui/usr/bin/relion_refine_mpi debian/relion-bin+mpi+gui/usr/bin/relion_preprocess debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish_mpi debian/relion-bin+mpi+gui/usr/bin/relion_mask_create debian/relion-bin+mpi+gui/usr/bin/relion_maingui debian/relion-bin+mpi+gui/usr/bin/relion_project debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish debian/relion-bin+mpi+gui/usr/bin/relion_stack_create debian/relion-bin+mpi+gui/usr/bin/relion_autopick debian/relion-bin+mpi+gui/usr/bin/relion_refine debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort_mpi debian/relion-bin+mpi+gui/usr/bin/relion_image_handler debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort debian/relion-bin+mpi+gui/usr/bin/relion_autopick_mpi debian/relion-bin+mpi+gui/usr/bin/relion_postprocess debian/relion-bin+mpi+gui/usr/bin/relion_find_tiltpairs debian/relion-bin+mpi+gui/usr/bin/relion_preprocess_mpi debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind_mpi debian/relion-bin+mpi+gui/usr/bin/relion_reconstruct debian/relion-bin+mpi+gui/usr/bin/relion_display were not linked against libX11.so.6 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+mpi+gui/usr/bin/relion_manualpick debian/relion-bin+mpi+gui/usr/bin/relion_refine_mpi debian/relion-bin+mpi+gui/usr/bin/relion_preprocess debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish_mpi debian/relion-bin+mpi+gui/usr/bin/relion_mask_create debian/relion-bin+mpi+gui/usr/bin/relion_maingui debian/relion-bin+mpi+gui/usr/bin/relion_project debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish debian/relion-bin+mpi+gui/usr/bin/relion_stack_create debian/relion-bin+mpi+gui/usr/bin/relion_autopick debian/relion-bin+mpi+gui/usr/bin/relion_refine debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort_mpi debian/relion-bin+mpi+gui/usr/bin/relion_image_handler debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort debian/relion-bin+mpi+gui/usr/bin/relion_autopick_mpi debian/relion-bin+mpi+gui/usr/bin/relion_postprocess debian/relion-bin+mpi+gui/usr/bin/relion_find_tiltpairs debian/relion-bin+mpi+gui/usr/bin/relion_preprocess_mpi debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind_mpi debian/relion-bin+mpi+gui/usr/bin/relion_reconstruct debian/relion-bin+mpi+gui/usr/bin/relion_display were not linked against libfftw3.so.3 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+mpi+gui/usr/bin/relion_manualpick debian/relion-bin+mpi+gui/usr/bin/relion_refine_mpi debian/relion-bin+mpi+gui/usr/bin/relion_preprocess debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish_mpi debian/relion-bin+mpi+gui/usr/bin/relion_mask_create debian/relion-bin+mpi+gui/usr/bin/relion_maingui debian/relion-bin+mpi+gui/usr/bin/relion_project debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish debian/relion-bin+mpi+gui/usr/bin/relion_stack_create debian/relion-bin+mpi+gui/usr/bin/relion_autopick debian/relion-bin+mpi+gui/usr/bin/relion_refine debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort_mpi debian/relion-bin+mpi+gui/usr/bin/relion_image_handler debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort debian/relion-bin+mpi+gui/usr/bin/relion_autopick_mpi debian/relion-bin+mpi+gui/usr/bin/relion_postprocess debian/relion-bin+mpi+gui/usr/bin/relion_find_tiltpairs debian/relion-bin+mpi+gui/usr/bin/relion_preprocess_mpi debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind_mpi debian/relion-bin+mpi+gui/usr/bin/relion_reconstruct debian/relion-bin+mpi+gui/usr/bin/relion_display were not linked against libfftw3_threads.so.3 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+mpi+gui/usr/bin/relion_manualpick debian/relion-bin+mpi+gui/usr/bin/relion_refine_mpi debian/relion-bin+mpi+gui/usr/bin/relion_preprocess debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish_mpi debian/relion-bin+mpi+gui/usr/bin/relion_mask_create debian/relion-bin+mpi+gui/usr/bin/relion_maingui debian/relion-bin+mpi+gui/usr/bin/relion_project debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish debian/relion-bin+mpi+gui/usr/bin/relion_stack_create debian/relion-bin+mpi+gui/usr/bin/relion_autopick debian/relion-bin+mpi+gui/usr/bin/relion_refine debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort_mpi debian/relion-bin+mpi+gui/usr/bin/relion_image_handler debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort debian/relion-bin+mpi+gui/usr/bin/relion_autopick_mpi debian/relion-bin+mpi+gui/usr/bin/relion_postprocess debian/relion-bin+mpi+gui/usr/bin/relion_find_tiltpairs debian/relion-bin+mpi+gui/usr/bin/relion_preprocess_mpi debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind_mpi debian/relion-bin+mpi+gui/usr/bin/relion_reconstruct debian/relion-bin+mpi+gui/usr/bin/relion_display were not linked against libhwloc.so.5 (they use none of the library's symbols) | |
| dpkg-shlibdeps: warning: package could avoid a useless dependency if debian/relion-bin+mpi+gui/usr/bin/relion_manualpick debian/relion-bin+mpi+gui/usr/bin/relion_refine_mpi debian/relion-bin+mpi+gui/usr/bin/relion_preprocess debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish_mpi debian/relion-bin+mpi+gui/usr/bin/relion_mask_create debian/relion-bin+mpi+gui/usr/bin/relion_maingui debian/relion-bin+mpi+gui/usr/bin/relion_project debian/relion-bin+mpi+gui/usr/bin/relion_particle_polish debian/relion-bin+mpi+gui/usr/bin/relion_stack_create debian/relion-bin+mpi+gui/usr/bin/relion_autopick debian/relion-bin+mpi+gui/usr/bin/relion_refine debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort_mpi debian/relion-bin+mpi+gui/usr/bin/relion_image_handler debian/relion-bin+mpi+gui/usr/bin/relion_particle_sort debian/relion-bin+mpi+gui/usr/bin/relion_autopick_mpi debian/relion-bin+mpi+gui/usr/bin/relion_postprocess debian/relion-bin+mpi+gui/usr/bin/relion_find_tiltpairs debian/relion-bin+mpi+gui/usr/bin/relion_preprocess_mpi debian/relion-bin+mpi+gui/usr/bin/relion_run_ctffind_mpi debian/relion-bin+mpi+gui/usr/bin/relion_reconstruct debian/relion-bin+mpi+gui/usr/bin/relion_display were not linked against libdl.so.2 (they use none of the library's symbols) | |
| Looking up shlibs dependency of libhwloc.so.5 provided by 'libhwloc5:amd64' | |
| Found libhwloc5 (>= 1.11.0) in /var/lib/dpkg/info/libhwloc5:amd64.shlibs | |
| Updating dependencies of libfltk.so.1.3 with build-dependencies | |
| No minimal version found in libfltk1.3-dev build-dependency | |
| make[1]: Leaving directory '/home/lamby/temp/cdt.20150828123118.FDgJ9i9Bmq/relion-1.3+dfsg' | |
| dh_installdeb | |
| dh_gencontrol | |
| dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe | |
| dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe | |
| dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe | |
| dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe | |
| dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe | |
| dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe | |
| dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe | |
| dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe | |
| dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe | |
| dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe | |
| dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe | |
| dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe | |
| dpkg-gencontrol: warning: File::FcntlLock not available; using flock which is not NFS-safe | |
| dh_md5sums | |
| dh_builddeb | |
| dpkg-deb: building package 'relion-bin' in '../relion-bin_1.3+dfsg-3_amd64.deb'. | |
| dpkg-deb: building package 'relion-bin+mpi' in '../relion-bin+mpi_1.3+dfsg-3_amd64.deb'. | |
| dpkg-deb: building package 'relion-bin+gui' in '../relion-bin+gui_1.3+dfsg-3_amd64.deb'. | |
| dpkg-deb: building package 'relion-bin+mpi+gui' in '../relion-bin+mpi+gui_1.3+dfsg-3_amd64.deb'. | |
| dpkg-deb: building package 'librelion-dev-common' in '../librelion-dev-common_1.3+dfsg-3_all.deb'. | |
| dpkg-deb: building package 'librelion-dev' in '../librelion-dev_1.3+dfsg-3_amd64.deb'. | |
| dpkg-deb: building package 'librelion+mpi-dev' in '../librelion+mpi-dev_1.3+dfsg-3_amd64.deb'. | |
| dpkg-deb: building package 'librelion+gui-dev' in '../librelion+gui-dev_1.3+dfsg-3_amd64.deb'. | |
| dpkg-deb: building package 'librelion+mpi+gui-dev' in '../librelion+mpi+gui-dev_1.3+dfsg-3_amd64.deb'. | |
| dpkg-deb: building package 'librelion-1.3-1v5' in '../librelion-1.3-1v5_1.3+dfsg-3_amd64.deb'. | |
| dpkg-deb: building package 'librelion+mpi-1.3-1v5' in '../librelion+mpi-1.3-1v5_1.3+dfsg-3_amd64.deb'. | |
| dpkg-deb: building package 'librelion+gui-1.3-1v5' in '../librelion+gui-1.3-1v5_1.3+dfsg-3_amd64.deb'. | |
| dpkg-deb: building package 'librelion+mpi+gui-1.3-1v5' in '../librelion+mpi+gui-1.3-1v5_1.3+dfsg-3_amd64.deb'. | |
| dpkg-genchanges -b >../relion_1.3+dfsg-3_amd64.changes | |
| dpkg-genchanges: binary-only upload (no source code included) | |
| dpkg-source --after-build relion-1.3+dfsg | |
| dpkg-source: info: using options from relion-1.3+dfsg/debian/source/options: --compression=xz | |
| dpkg-buildpackage: binary-only upload (no source included) |
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