lars-von-buchholtz
lars-von-buchholtz
/ SpatialClustering.ipynb
Created
February 7, 2022 18:23
Spatial Analysis of Cell Type Clustering in Microscopy Images
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lars-von-buchholtz
/ kl_divergence.R
Last active
June 25, 2021 16:17
Kullback-Leibler divergence for multivariate samples from continuous distributions
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| library(RANN) | |
| kl <- function(X,Y) { | |
| """Estimate the Kullback-Leibler divergence between two multivariate samples. | |
| adapted for R from python code at https://gist.github.com/atabakd/ed0f7581f8510c8587bc2f41a094b518 | |
| as described in Fernando Pérez-cruz, Kullback-Leibler Divergence Estimation of Continuous Distributions, | |
| Proceedings of IEEE International Symposium on Information Theory, 2008, 1666--1670 |