larssono

"""Get permalink to git commit for a specific path.

"""

import os
import ConfigParser
import github

def getToken(cfgfile="~/.pygit"):
    """Authenticate using a token.

larssono

import pandas as pd
import synapseclient
import os

def compare2Files(fname, originFiles, newFiles, syn):
    df1 = pd.read_csv(syn.get(originFiles[fname]).path, sep="\t")
    df2 = pd.read_csv(syn.get(newFiles[fname]).path, sep="\t")
    df1 = df1.ix[sort(df1.index), sort(df1.columns)]
    df2 = df2.ix[sort(df2.index), sort(df2.columns)]