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Sample.ID Number.of.Reads Mean.Reads.per.Spot Median.Genes.per.Spot Median.UMI.Counts.per.Spot Valid.Barcodes Sequencing.Saturation Q30.Bases.in.Barcode Q30.Bases.in.RNA.Read Q30.Bases.in.UMI Reads.Mapped.to.Genome Reads.Mapped.Confidently.to.Genome Reads.Mapped.Confidently.to.Intergenic.Regions Reads.Mapped.Confidently.to.Intronic.Regions Reads.Mapped.Confidently.to.Exonic.Regions Reads.Mapped.Confidently.to.Transcriptome Reads.Mapped.Antisense.to.Gene Total.Genes.Detected study
1 V10A27004_A1_Br3874 250388898 50995.7022403259 1302 2348 96.1 91.9 96.2 93.9 95.8 95.1 79.8 8.7 2.3 68.7 66.4 1 22439 VisiumIF
2 V10A27004_D1_Br3880 173548606 37646.1184381779 1155 2058 95.6 89.5 96.4 93.8 95.8 95.2 74.3 5.8 2.7 65.8 62.9 1.5 22355 VisiumIF
3 V10A27106_A1_Br3874 316562059 75605.9371865297 1347 2176 96.7 93.6 96.3 94 95.7 95 78.1 10.3 4.4 63.3 61.6 0.6 22809 VisiumIF
4 V10A27106_B1_Br3854 204558515 76157.3026805659 1126.5 1938 96.6 94 96.4 94.5 95.8 96.9 80.1 8.5 3.3 68.3 66.6 0.6 21041 VisiumIF
5 V10A27106_C1_Br3873 220898563 74251.6178151261 1388 2431 96.5 92.2 96.4 94.2 95.8 96.2 80.3 8.1 5.3 66.9 65 0.8 21859 VisiumIF
6 V10A27106_D1_Br3880 326514734 71729.9503514939 1193 2022 96.7 94.7 96.5 94.6 95.9 97.3 77.1 6.5 2.5 68.1 66.2 0.8 22501 VisiumIF
7 V10T31036_A1_Br3874 266607892 62001.8353488372 726.5 1051 96.7 96.2 96.4 94.2 95.9 97.6 74.2 7.7 3.8 62.7 61.1 0.5 21233 VisiumIF
8 V10T31036_B1_Br3854 154780779 43921.9009648127 548 777 96.8 95.2 96.2 94.2 95.8 97.7 69.3 7.2 3.4 58.8 57.1 0.6 19836 VisiumIF
9 V10T31036_C1_Br3873 219940925 76421.4471855455 811.5 1273.5 96.9 95 96.1 94.4 95.7 97.6 74.3 9.6 6.7 58 56.3 0.6 20621 VisiumIF
10 V10T31036_D1_Br3880 1106766081 241125.507843137 963.5 1596.5 25.7 95.3 95.9 92.2 94 92.1 68.3 4.5 8.3 55.4 20.9 33.2 22131 VisiumIF
11 Br2743_ant 177157767 43581.2 1063 1650 97.2 92.2 94.1 93.4 94.4 90 72.9 7.9 3 62 60.5 0.3 20983 spatialDLPFC
12 Br2743_mid 197423236 46496.3 1495.5 2438.5 97.1 91.7 94.1 94.2 94.4 91.8 81.7 7.2 2.7 71.8 69.9 0.7 21820 spatialDLPFC
13 Br2743_post_5 179860259 46487.5 1443 2200 97 92.5 94.2 92.8 94.6 92.8 84.7 7.4 2.2 75.1 73.5 0.5 20930 spatialDLPFC
14 3942_ant 260599165 66632.4 2029 3453 96.8 89.4 93.6 91.2 93.9 75.4 68.8 7.1 2.2 59.5 57.8 0.3 22194 spatialDLPFC
15 3942_mid 180617936 45982.2 1528 2523 97.1 93 94.7 93.4 95.1 96.2 92.8 4.5 1.8 86.4 83.7 1.3 22140 spatialDLPFC
16 3942_post 303081890 68882.2 2388 4128 96.9 90.4 94 93.4 94.3 87.7 84.5 6.5 2.5 75.5 73.9 0.5 22708 spatialDLPFC
17 Br6423_ant 257160696 65837.4 1331.5 2063.5 96.8 94.5 93.9 92.1 94.1 82.3 77.6 5.5 2.3 69.9 68.1 0.5 21156 spatialDLPFC
18 Br6423_mid 106380870 26702 1467 2314 96.8 88.2 94.4 93.9 94.7 96.3 91.6 5.1 1.9 84.6 81.9 1.4 21514 spatialDLPFC
19 Br6423_post_7 177832304 46178.2 1488 2223 96.8 93.4 94.3 93.8 94.6 95.6 91.7 5.4 2.1 84.1 82 1 21313 spatialDLPFC
20 Br8492_ant 311848464 65063.3 1267 1902 96.5 93.8 93.4 91 93.7 74.5 69.2 6 2.1 61.1 59.4 0.4 21048 spatialDLPFC
21 Br8492_mid 105315677 23746.5 1056 1513 96.8 91.7 94.6 93.8 95 97.1 91.7 5.5 2 84.2 81.4 1.5 20811 spatialDLPFC
22 Br8492_post 226227723 48988.2 1137 1616 96.8 95.2 94 93.3 94.4 93.8 88.2 5.6 1.7 80.9 78.4 1.3 20967 spatialDLPFC
23 151507 325097795 76928 1384 2463 96.9 95.3 97.1 95.2 97.2 96.3 93.4 6.4 1.9 85 79.5 3.3 21151 spatialLIBD
24 151508 264048425 60230 1159 2019 96.9 95.2 97 95.1 97 96.6 93.8 7.5 1.8 84.5 79.3 2.8 20737 spatialLIBD
25 151509 281536357 58788 1407 2416 96.5 94 96.8 95 96.8 95.6 92.5 6.8 2 83.7 77.3 4.1 21279 spatialLIBD
26 151510 271009717 58482 1344 2319 96.6 94.1 97 95.1 97 95.9 92.7 7.4 1.9 83.4 77.5 3.6 21089 spatialLIBD
27 151669 335637329 91679 1737 3470 97.2 94 96.9 95.2 96.9 95.2 91.9 8.1 1.9 81.8 77.7 1.9 21235 spatialLIBD
28 151670 229265721 65541 1607 3113 97.2 92.6 96.8 94.6 96.9 95.6 92.6 8 1.9 82.7 78.5 2 21019 spatialLIBD
29 151671 488495408 118855 1853 3743 97.1 95.5 97.1 95.1 97.1 96.5 93.8 7.5 1.8 84.5 79.8 2.5 21631 spatialLIBD
30 151672 280822592 69943 1740 3482 97.2 92.7 96.8 95.2 96.8 95.4 92.3 7.7 1.8 82.7 78.4 2 21343 spatialLIBD
31 151673 300684902 82628 2113 4120 97 92.1 97 95.1 97.1 95.7 92.8 6.4 2.2 84.2 79.5 2.4 21842 spatialLIBD
32 151674 822237691 223859 2610 5334 97.1 96.1 96.8 95.1 96.9 94.5 91.1 6.9 2.3 81.9 77.6 2.1 22437 spatialLIBD
33 151675 233478770 64999 1695 3139 97 92.1 97 95.5 97 96 92.8 6.9 2.2 83.8 79.4 2.1 21344 spatialLIBD
34 151676 320748023 92701 1813 3419 97.2 93.8 97 95.1 97 94.5 91 7.3 2.2 81.5 77.6 1.7 21312 spatialLIBD
## Automatically style the code in this script:
styler::style_file(here("code.R"),
transformers = biocthis::bioc_style()
)
library("ggplot2")
library("here")
library("ggpubr")
library("sessioninfo")
## Read in the data
sample_metrics <- read.csv("sample_metrics.csv", row.names = "X")
all_metrics <- read.csv("all_metrics.csv", row.names = "X")
## Explore the data
View(sample_metrics)
View(all_metrics)
## Compare fiducial alignments: made by Abby or by 10x Genomics
## Used https://rpkgs.datanovia.com/ggpubr/reference/ggpaired.html
pdf(
here("alignment_check_abby_vs_10x.pdf"),
useDingbats = FALSE,
width = 10
)
for (i in colnames(sample_metrics)[-c(1, ncol(sample_metrics))]) {
p <-
ggpaired(
sample_metrics,
id = "Sample.ID",
x = "Alignment",
y = i,
xlab = "Fiducial Alignment",
ylab = i,
fill = "Alignment",
palette = "Dark2",
line.color = "gray",
ggtheme = theme_pubr(base_size = 30)
)
print(p)
}
dev.off()
## Compare metrics one at a time across studies
## Used https://rpkgs.datanovia.com/ggpubr/reference/ggboxplot.html
pdf(
here(
"cross_study_spaceranger_metrics_boxplots.pdf"
),
useDingbats = FALSE,
width = 10
)
for (i in colnames(all_metrics)[-c(1, ncol(all_metrics))]) {
set.seed(20210714)
p <-
ggboxplot(
all_metrics,
x = "study",
y = i,
color = "study",
palette = "Dark2",
add = "jitter",
shape = "study",
label = "Sample.ID",
repel = TRUE,
font.label = list(size = 5),
ggtheme = theme_pubr(base_size = 30),
legend = "none"
)
print(p)
}
dev.off()
print("Reproducibility information:")
Sys.time()
proc.time()
options(width = 120)
session_info()
# ─ Session info ───────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
# setting value
# version R version 4.1.0 (2021-05-18)
# os macOS Big Sur 11.4
# system x86_64, darwin17.0
# ui RStudio
# language (EN)
# collate en_US.UTF-8
# ctype en_US.UTF-8
# tz America/New_York
# date 2021-07-23
#
# ─ Packages ───────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────────
# package * version date lib source
# abind 1.4-5 2016-07-21 [1] CRAN (R 4.1.0)
# assertthat 0.2.1 2019-03-21 [1] CRAN (R 4.1.0)
# backports 1.2.1 2020-12-09 [1] CRAN (R 4.1.0)
# biocthis 1.2.0 2021-05-19 [1] Bioconductor
# broom 0.7.8 2021-06-24 [1] CRAN (R 4.1.0)
# cachem 1.0.5 2021-05-15 [1] CRAN (R 4.1.0)
# callr 3.7.0 2021-04-20 [1] CRAN (R 4.1.0)
# car 3.0-11 2021-06-27 [1] CRAN (R 4.1.0)
# carData 3.0-4 2020-05-22 [1] CRAN (R 4.1.0)
# cellranger 1.1.0 2016-07-27 [1] CRAN (R 4.1.0)
# cli 3.0.0 2021-06-30 [1] CRAN (R 4.1.0)
# colorout 1.2-2 2020-11-03 [1] Github (jalvesaq/colorout@726d681)
# colorspace 2.0-2 2021-06-24 [1] CRAN (R 4.1.0)
# crayon 1.4.1 2021-02-08 [1] CRAN (R 4.1.0)
# curl 4.3.2 2021-06-23 [1] CRAN (R 4.1.0)
# data.table 1.14.0 2021-02-21 [1] CRAN (R 4.1.0)
# DBI 1.1.1 2021-01-15 [1] CRAN (R 4.1.0)
# desc 1.3.0 2021-03-05 [1] CRAN (R 4.1.0)
# devtools * 2.4.2 2021-06-07 [1] CRAN (R 4.1.0)
# digest 0.6.27 2020-10-24 [1] CRAN (R 4.1.0)
# dplyr 1.0.7 2021-06-18 [1] CRAN (R 4.1.0)
# ellipsis 0.3.2 2021-04-29 [1] CRAN (R 4.1.0)
# fansi 0.5.0 2021-05-25 [1] CRAN (R 4.1.0)
# farver 2.1.0 2021-02-28 [1] CRAN (R 4.1.0)
# fastmap 1.1.0 2021-01-25 [1] CRAN (R 4.1.0)
# forcats 0.5.1 2021-01-27 [1] CRAN (R 4.1.0)
# foreign 0.8-81 2020-12-22 [1] CRAN (R 4.1.0)
# fs 1.5.0 2020-07-31 [1] CRAN (R 4.1.0)
# generics 0.1.0 2020-10-31 [1] CRAN (R 4.1.0)
# ggplot2 * 3.3.5 2021-06-25 [1] CRAN (R 4.1.0)
# ggpubr * 0.4.0 2020-06-27 [1] CRAN (R 4.1.0)
# ggrepel 0.9.1 2021-01-15 [1] CRAN (R 4.1.0)
# ggsignif 0.6.2 2021-06-14 [1] CRAN (R 4.1.0)
# glue 1.4.2 2020-08-27 [1] CRAN (R 4.1.0)
# gtable 0.3.0 2019-03-25 [1] CRAN (R 4.1.0)
# haven 2.4.1 2021-04-23 [1] CRAN (R 4.1.0)
# here * 1.0.1 2020-12-13 [1] CRAN (R 4.1.0)
# hms 1.1.0 2021-05-17 [1] CRAN (R 4.1.0)
# labeling 0.4.2 2020-10-20 [1] CRAN (R 4.1.0)
# lifecycle 1.0.0 2021-02-15 [1] CRAN (R 4.1.0)
# lubridate 1.7.10 2021-02-26 [1] CRAN (R 4.1.0)
# magrittr 2.0.1 2020-11-17 [1] CRAN (R 4.1.0)
# memoise 2.0.0 2021-01-26 [1] CRAN (R 4.1.0)
# munsell 0.5.0 2018-06-12 [1] CRAN (R 4.1.0)
# openxlsx 4.2.4 2021-06-16 [1] CRAN (R 4.1.0)
# pillar 1.6.1 2021-05-16 [1] CRAN (R 4.1.0)
# pkgbuild 1.2.0 2020-12-15 [1] CRAN (R 4.1.0)
# pkgconfig 2.0.3 2021-03-31 [1] Github (gaborcsardi/pkgconfig@b81ae03)
# pkgload 1.2.1 2021-04-06 [1] CRAN (R 4.1.0)
# prettyunits 1.1.1 2020-01-24 [1] CRAN (R 4.1.0)
# processx 3.5.2 2021-04-30 [1] CRAN (R 4.1.0)
# prompt 1.0.1 2021-03-12 [1] CRAN (R 4.1.0)
# ps 1.6.0 2021-02-28 [1] CRAN (R 4.1.0)
# purrr 0.3.4 2020-04-17 [1] CRAN (R 4.1.0)
# R.cache 0.15.0 2021-04-30 [1] CRAN (R 4.1.0)
# R.methodsS3 1.8.1 2020-08-26 [1] CRAN (R 4.1.0)
# R.oo 1.24.0 2020-08-26 [1] CRAN (R 4.1.0)
# R.utils 2.10.1 2020-08-26 [1] CRAN (R 4.1.0)
# R6 2.5.0 2020-10-28 [1] CRAN (R 4.1.0)
# RColorBrewer 1.1-2 2014-12-07 [1] CRAN (R 4.1.0)
# Rcpp 1.0.7 2021-07-07 [1] CRAN (R 4.1.0)
# readxl 1.3.1 2019-03-13 [1] CRAN (R 4.1.0)
# rematch2 2.1.2 2020-05-01 [1] CRAN (R 4.1.0)
# remotes 2.4.0 2021-06-02 [1] CRAN (R 4.1.0)
# rio 0.5.27 2021-06-21 [1] CRAN (R 4.1.0)
# rlang 0.4.11 2021-04-30 [1] CRAN (R 4.1.0)
# rprojroot 2.0.2 2020-11-15 [1] CRAN (R 4.1.0)
# rstatix 0.7.0 2021-02-13 [1] CRAN (R 4.1.0)
# rsthemes 0.2.1.9000 2021-02-12 [1] Github (gadenbuie/rsthemes@521572b)
# rstudioapi 0.13 2020-11-12 [1] CRAN (R 4.1.0)
# scales 1.1.1 2020-05-11 [1] CRAN (R 4.1.0)
# sessioninfo * 1.1.1 2018-11-05 [1] CRAN (R 4.1.0)
# stringi 1.7.2 2021-07-14 [1] CRAN (R 4.1.0)
# styler 1.5.1 2021-07-13 [1] CRAN (R 4.1.0)
# suncalc 0.5.0 2019-04-03 [1] CRAN (R 4.1.0)
# testthat * 3.0.4 2021-07-01 [1] CRAN (R 4.1.0)
# tibble 3.1.2 2021-05-16 [1] CRAN (R 4.1.0)
# tidyr 1.1.3 2021-03-03 [1] CRAN (R 4.1.0)
# tidyselect 1.1.1 2021-04-30 [1] CRAN (R 4.1.0)
# usethis * 2.0.1 2021-02-10 [1] CRAN (R 4.1.0)
# utf8 1.2.1 2021-03-12 [1] CRAN (R 4.1.0)
# vctrs 0.3.8 2021-04-29 [1] CRAN (R 4.1.0)
# withr 2.4.2 2021-04-18 [1] CRAN (R 4.1.0)
# xfun 0.24 2021-06-15 [1] CRAN (R 4.1.0)
# zip 2.2.0 2021-05-31 [1] CRAN (R 4.1.0)
#
# [1] /Library/Frameworks/R.framework/Versions/4.1/Resources/library
Sample.ID Number.of.Spots.Under.Tissue Number.of.Reads Mean.Reads.per.Spot Mean.Reads.Under.Tissue.per.Spot Fraction.of.Spots.Under.Tissue Median.Genes.per.Spot Median.UMI.Counts.per.Spot Valid.Barcodes Valid.UMIs Sequencing.Saturation Q30.Bases.in.Barcode Q30.Bases.in.RNA.Read Q30.Bases.in.UMI Reads.Mapped.to.Genome Reads.Mapped.Confidently.to.Genome Reads.Mapped.Confidently.to.Intergenic.Regions Reads.Mapped.Confidently.to.Intronic.Regions Reads.Mapped.Confidently.to.Exonic.Regions Reads.Mapped.Confidently.to.Transcriptome Reads.Mapped.Antisense.to.Gene Fraction.Reads.in.Spots.Under.Tissue Total.Genes.Detected Alignment
1 V10A27004_A1_Br3874 4910 250388898 50995.7022403259 48368.0395112016 0.983573717948718 1302 2348 0.960753475579416 0.998811249211217 0.919297807150796 0.962089365727419 0.938768591228323 0.957812669115112 0.951109162196161 0.797875714920875 0.0869168847893568 0.0234648223101329 0.687494007821385 0.664476309968024 0.00988360514290853 0.987707817702276 22439 Abby
2 V10A27004_D1_Br3880 4610 173548606 37646.1184381779 33428.1605206074 0.923477564102564 1155 2058 0.956125974299096 0.998918326085546 0.895470548687243 0.963555513840138 0.938134113689484 0.958428653387733 0.951900201376438 0.742550349266418 0.0581350852221769 0.026791531820198 0.657623732224043 0.629130285264291 0.0151808882867086 0.923391550491752 22355 Abby
3 V10A27106_A1_Br3874 4187 316562059 75605.9371865297 61610.1370909959 0.838741987179487 1347 2176 0.96669481164829 0.999521266065558 0.936379582038632 0.96257109122518 0.940073340641058 0.957197159134918 0.950176334934693 0.78093424960949 0.103378848063406 0.0444256492531848 0.633129752292899 0.615719001878238 0.00617696260308946 0.838750561890505 22809 Abby
4 V10A27106_B1_Br3854 2686 204558515 76157.3026805659 50232.3603871928 0.538060897435897 1126.5 1938 0.966425479770422 0.99973796739774 0.940113014045053 0.963863604453622 0.945031993414199 0.958235202842374 0.96898032330749 0.801152257093771 0.0846274231116705 0.0334816910457137 0.683043142936387 0.665605345248033 0.00621408989012264 0.659060228288747 21041 Abby
5 V10A27106_C1_Br3873 2975 220898563 74251.6178151261 49826.4621848739 0.595953525641026 1388 2431 0.965474927059621 0.99975659868824 0.921609613034569 0.964316637193592 0.942473389005411 0.958496141278726 0.96153722376184 0.803191535474135 0.0811225105162862 0.0529020643742259 0.669166960583623 0.650070552971411 0.0075946397170542 0.686174999536813 21859 Abby
6 V10A27106_D1_Br3880 4552 326514734 71729.9503514939 64919.7409929701 0.911858974358974 1193 2022 0.966562112324156 0.999828268086671 0.946908814395444 0.964586668665394 0.945513540445062 0.95919731467962 0.97251105366657 0.771391746750393 0.0648384185933857 0.0251950957900724 0.681358232366935 0.661679154117437 0.00794749740144958 0.920441182824334 22501 Abby
7 V10T31036_A1_Br3874 4300 266607892 62001.8353488372 51613.9530232558 0.861378205128205 726.5 1051 0.967163777732431 0.999927230211175 0.962343920513618 0.964131215728931 0.941640297113819 0.959241786744685 0.97598165998777 0.741608009113249 0.0771386129859952 0.0375707407791214 0.626898655348132 0.610840814869801 0.00507652264097268 0.843074325035066 21233 Abby
8 V10T31036_B1_Br3854 3524 154780779 43921.9009648127 31856.3339954597 0.705929487179487 548 777 0.968163217475472 0.9999366458803 0.951864160437285 0.961954348199563 0.942499695846234 0.957573455811753 0.977022308435339 0.693141388053099 0.0717306378203459 0.0337758734241801 0.587634876808573 0.571279648359956 0.00570547587178121 0.70223350474551 19836 Abby
9 V10T31036_C1_Br3873 2878 219940925 76421.4471855455 47834.0510771369 0.576522435897436 811.5 1273.5 0.968668295816252 0.999927930647741 0.949589102624817 0.961470117308488 0.944087284393363 0.956804546952204 0.975912354647049 0.742992710428948 0.0960911390183523 0.0666105819096651 0.580290989500931 0.562631124698598 0.0061444499244513 0.657313094405038 20621 Abby
10 V10T31036_D1_Br3880 4590 1106766081 241125.507843137 58019.5161220044 0.919471153846154 963.5 1596.5 0.256581152851575 0.998349319669835 0.953075389065038 0.959046453453379 0.921532465355731 0.939844842850214 0.920757844403076 0.682509622374305 0.0448797599173985 0.0832373692883347 0.554392493168572 0.208755921387873 0.331600148667729 0.926355881748322 22131 Abby
11 V10A27004_A1_Br3874 4863 250388898 51488.5663170882 48561.2095414353 0.974158653846154 1304 2355 0.960753475579416 0.998811249211217 0.919297807150796 0.962089365727419 0.938768591228323 0.957812669115112 0.951109162196161 0.797875714920875 0.0869168847893568 0.0234648223101329 0.687494007821385 0.664476309968024 0.00988360514290853 0.981314122765295 22428 10x
12 V10A27004_D1_Br3880 4543 173548606 38201.3220338983 33282.9865727493 0.91005608974359 1152 2049 0.956125974299096 0.998918326085546 0.895470548687243 0.963555513840138 0.938134113689484 0.958428653387733 0.951900201376438 0.742550349266418 0.0581350852221769 0.026791531820198 0.657623732224043 0.629130285264291 0.0151808882867086 0.904613187641248 22297 10x
13 V10A27106_A1_Br3874 4007 316562059 79002.2607936112 61378.3234339905 0.802684294871795 1345 2180 0.96669481164829 0.999521266065558 0.936379582038632 0.96257109122518 0.940073340641058 0.957197159134918 0.950176334934693 0.78093424960949 0.103378848063406 0.0444256492531848 0.633129752292899 0.615719001878238 0.00617696260308946 0.795267146397775 22695 10x
14 V10A27106_B1_Br3854 2616 204558515 78195.1509938838 50114.5359327217 0.524038461538462 1123.5 1938.5 0.966425479770422 0.99973796739774 0.940113014045053 0.963863604453622 0.945031993414199 0.958235202842374 0.96898032330749 0.801152257093771 0.0846274231116705 0.0334816910457137 0.683043142936387 0.665605345248033 0.00621408989012264 0.638358116095852 20958 10x
15 V10A27106_C1_Br3873 2788 220898563 79231.9092539455 49270.6495695839 0.55849358974359 1372 2398 0.965474927059621 0.99975659868824 0.921609613034569 0.964316637193592 0.942473389005411 0.958496141278726 0.96153722376184 0.803191535474135 0.0811225105162862 0.0529020643742259 0.669166960583623 0.650070552971411 0.0075946397170542 0.629852961424137 21595 10x
16 V10A27106_D1_Br3880 4480 326514734 72882.753125 65038.3915178571 0.897435897435897 1188 2015 0.966562112324156 0.999828268086671 0.946908814395444 0.964586668665394 0.945513540445062 0.95919731467962 0.97251105366657 0.771391746750393 0.0648384185933857 0.0251950957900724 0.681358232366935 0.661679154117437 0.00794749740144958 0.905195525340793 22452 10x
17 V10T31036_A1_Br3874 4171 266607892 63919.4178853992 51557.5581395349 0.835536858974359 728 1054 0.967163777732431 0.999927230211175 0.962343920513618 0.964131215728931 0.941640297113819 0.959241786744685 0.97598165998777 0.741608009113249 0.0771386129859952 0.0375707407791214 0.626898655348132 0.610840814869801 0.00507652264097268 0.818812905718964 21151 10x
18 V10T31036_B1_Br3854 3429 154780779 45138.7515310586 31901.9422572178 0.686899038461538 548 776 0.968163217475472 0.9999366458803 0.951864160437285 0.961954348199563 0.942499695846234 0.957573455811753 0.977022308435339 0.693141388053099 0.0717306378203459 0.0337758734241801 0.587634876808573 0.571279648359956 0.00570547587178121 0.679436406943249 19784 10x
19 V10T31036_C1_Br3873 2658 219940925 82746.773890143 48045.3370955606 0.532451923076923 823 1292 0.968668295816252 0.999927930647741 0.949589102624817 0.961470117308488 0.944087284393363 0.956804546952204 0.975912354647049 0.742992710428948 0.0960911390183523 0.0666105819096651 0.580290989500931 0.562631124698598 0.0061444499244513 0.620438318286251 20383 10x
20 V10T31036_D1_Br3880 4596 1106766081 240810.722584856 57495.8348563969 0.920673076923077 957 1584 0.256581152851575 0.998349319669835 0.953075389065038 0.959046453453379 0.921532465355731 0.939844842850214 0.920757844403076 0.682509622374305 0.0448797599173985 0.0832373692883347 0.554392493168572 0.208755921387873 0.331600148667729 0.915613892761649 22106 10x
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