Commands I use frequently when building the derfinder package. I save it on the directory, say WDIR, where WDIR/derfinder is located at.

document-derfinder.R

library(devtools)

## Create the documentation fresh
document("derfinder", clean=TRUE)
## Install the package
install("derfinder")

## Check the help
library(derfinder)
help(package=derfinder)

## Check the doc, pkg
check_doc("derfinder")
system.time(check("derfinder"))

build("derfinder")
## Build the vignette
build_vignettes("derfinder")


## Testing an example
example("calculatePvalues", "derfinder")

## Install from github
library(devtools)
install_github("derfinder", "lcolladotor")


########## derfinderReport
library(devtools)

## Create the documentation fresh
document("derfinderReport", clean=TRUE)
## Install the package
install("derfinderReport")

## Check the doc, pkg
check_doc("derfinderReport")
system.time(check("derfinderReport"))