Created
June 17, 2024 16:34
-
-
Save lexming/137cefbb05e5ab422597ecef6ce705b1 to your computer and use it in GitHub Desktop.
(partial) EasyBuild log for failed build of /tmp/eb-pg4acmy6/files_pr19497/e/ESMF/ESMF-8.6.0-foss-2023a.eb (PR(s) #19497)
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
libdl.so.2 => /lib64/libdl.so.2 (0x00001506529ef000) | |
libflexiblas.so.3 => /apps/brussel/RL8/zen4/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib64/libflexiblas.so.3 (0x000015065260a000) | |
libpthread.so.0 => /lib64/libpthread.so.0 (0x00001506523ea000) | |
libnetcdf.so.19 => /apps/brussel/RL8/zen4/software/netCDF/4.9.2-gompi-2023a/lib64/libnetcdf.so.19 (0x000015065217b000) | |
libnetcdff.so.7 => /apps/brussel/RL8/zen4/software/netCDF-Fortran/4.6.1-gompi-2023a/lib/libnetcdff.so.7 (0x0000150653205000) | |
libm.so.6 => /lib64/libm.so.6 (0x0000150651df9000) | |
libnetcdf_c++4.so.1 => /user/brussel/101/vsc10122/easybuild/install/zen4/software/netCDF-C++4/4.3.1-gompi-2023a/lib64/libnetcdf_c++4.so.1 (0x00001506531b1000) | |
libmpi.so.40 => /apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib/libmpi.so.40 (0x0000150651cc9000) | |
libstdc++.so.6 => /apps/brussel/RL8/zen4/software/GCCcore/12.3.0/lib64/libstdc++.so.6 (0x0000150651aa0000) | |
libgomp.so.1 => /apps/brussel/RL8/zen4/software/GCCcore/12.3.0/lib64/libgomp.so.1 (0x0000150653168000) | |
libgcc_s.so.1 => /apps/brussel/RL8/zen4/software/GCCcore/12.3.0/lib64/libgcc_s.so.1 (0x0000150653147000) | |
libc.so.6 => /lib64/libc.so.6 (0x00001506516db000) | |
libquadmath.so.0 => /apps/brussel/RL8/zen4/software/GCCcore/12.3.0/lib/../lib64/libquadmath.so.0 (0x00001506530fe000) | |
/lib64/ld-linux-x86-64.so.2 (0x00001506530c9000) | |
libhdf5_hl.so.310 => not found | |
libhdf5.so.310 => not found | |
libz.so.1 => /lib64/libz.so.1 (0x00001506514c3000) | |
libzstd.so.1 => /lib64/libzstd.so.1 (0x000015065121f000) | |
libbz2.so.1.0 => not found | |
libsz.so.2 => /lib64/libsz.so.2 (0x000015065101c000) | |
libcurl.so.4 => /lib64/libcurl.so.4 (0x0000150650d8d000) | |
libxml2.so.2 => /lib64/libxml2.so.2 (0x0000150650a25000) | |
libmpi_usempif08.so.40 => /apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib/libmpi_usempif08.so.40 (0x00001506509ec000) | |
libmpi_usempi_ignore_tkr.so.40 => /apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib/libmpi_usempi_ignore_tkr.so.40 (0x00001506509df000) | |
libmpi_mpifh.so.40 => /apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib/libmpi_mpifh.so.40 (0x0000150650973000) | |
libopen-rte.so.40 => /apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib/libopen-rte.so.40 (0x00001506508b8000) | |
libopen-pal.so.40 => /apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib/libopen-pal.so.40 (0x0000150650805000) | |
libutil.so.1 => /lib64/libutil.so.1 (0x0000150650601000) | |
libhwloc.so.15 => /apps/brussel/RL8/zen4/software/hwloc/2.9.1-GCCcore-12.3.0/lib/libhwloc.so.15 (0x00001506505a1000) | |
libpciaccess.so.0 => /apps/brussel/RL8/zen4/software/libpciaccess/0.17-GCCcore-12.3.0/lib/libpciaccess.so.0 (0x0000150650595000) | |
liblzma.so.5 => /apps/brussel/RL8/zen4/software/XZ/5.4.2-GCCcore-12.3.0/lib/liblzma.so.5 (0x0000150650567000) | |
libevent_core-2.1.so.7 => /apps/brussel/RL8/zen4/software/libevent/2.1.12-GCCcore-12.3.0/lib/libevent_core-2.1.so.7 (0x0000150650530000) | |
libevent_pthreads-2.1.so.7 => /apps/brussel/RL8/zen4/software/libevent/2.1.12-GCCcore-12.3.0/lib/libevent_pthreads-2.1.so.7 (0x000015065052b000) | |
libaec.so.0 => /lib64/libaec.so.0 (0x0000150650321000) | |
libnghttp2.so.14 => /lib64/libnghttp2.so.14 (0x00001506500fa000) | |
libidn2.so.0 => /lib64/libidn2.so.0 (0x000015064fedc000) | |
libssh.so.4 => /lib64/libssh.so.4 (0x000015064fc6c000) | |
libpsl.so.5 => /lib64/libpsl.so.5 (0x000015064fa5b000) | |
libssl.so.1.1 => /apps/brussel/RL8/zen4/software/OpenSSL/1.1/lib/../lib64/libssl.so.1.1 (0x000015064f7c7000) | |
libcrypto.so.1.1 => /apps/brussel/RL8/zen4/software/OpenSSL/1.1/lib/../lib64/libcrypto.so.1.1 (0x000015064f2da000) | |
libgssapi_krb5.so.2 => /lib64/libgssapi_krb5.so.2 (0x000015064f085000) | |
libkrb5.so.3 => /lib64/libkrb5.so.3 (0x000015064ed9a000) | |
libk5crypto.so.3 => /lib64/libk5crypto.so.3 (0x000015064eb83000) | |
libcom_err.so.2 => /lib64/libcom_err.so.2 (0x000015064e97f000) | |
libldap-2.4.so.2 => /lib64/libldap-2.4.so.2 (0x000015064e730000) | |
liblber-2.4.so.2 => /lib64/liblber-2.4.so.2 (0x000015064e51e000) | |
libbrotlidec.so.1 => /lib64/libbrotlidec.so.1 (0x000015064e311000) | |
libunistring.so.2 => /lib64/libunistring.so.2 (0x000015064df90000) | |
libkrb5support.so.0 => /lib64/libkrb5support.so.0 (0x000015064dd7f000) | |
libkeyutils.so.1 => /lib64/libkeyutils.so.1 (0x000015064db79000) | |
libresolv.so.2 => /lib64/libresolv.so.2 (0x000015064d961000) | |
libsasl2.so.3 => /lib64/libsasl2.so.3 (0x000015064d743000) | |
libbrotlicommon.so.1 => /lib64/libbrotlicommon.so.1 (0x000015064d522000) | |
libselinux.so.1 => /lib64/libselinux.so.1 (0x000015064d2f7000) | |
libcrypt.so.1 => /lib64/libcrypt.so.1 (0x000015064d0cc000) | |
libpcre2-8.so.0 => /lib64/libpcre2-8.so.0 (0x000015064ce48000) | |
== 2024-06-17 18:34:02,486 run.py:504 INFO Shell command completed successfully (see output above): ldd /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib/libesmftrace_preload.so | |
== 2024-06-17 18:34:02,488 easyblock.py:3178 WARNING Library libhdf5_hl.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib/libesmftrace_preload.so | |
== 2024-06-17 18:34:02,488 easyblock.py:3178 WARNING Library libhdf5.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib/libesmftrace_preload.so | |
== 2024-06-17 18:34:02,488 easyblock.py:3178 WARNING Library libbz2.so.1.0 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib/libesmftrace_preload.so | |
== 2024-06-17 18:34:02,488 run.py:331 INFO Auto-enabling streaming output of 'readelf -d /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib/libesmftrace_preload.so' command because logging to stdout is enabled | |
== 2024-06-17 18:34:02,488 run.py:341 INFO run_shell_cmd: Output of "readelf -d /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib/libesmftrace_preload.so" will be logged to /tmp/eb-pg4acmy6/run-shell-cmd-output/readelf-4tsa0xdp/out.txt | |
== 2024-06-17 18:34:02,489 run.py:376 INFO Path to bash that will be used to run shell commands: /bin/bash | |
== 2024-06-17 18:34:02,489 run.py:398 INFO Running shell command 'readelf -d /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib/libesmftrace_preload.so' in /rhea/scratch/brussel/vo/000/bvo00005/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a | |
== 2024-06-17 18:34:02,598 run.py:501 INFO Output of 'readelf ...' shell command (stdout + stderr): | |
Dynamic section at offset 0x13d10 contains 39 entries: | |
Tag Type Name/Value | |
0x0000000000000001 (NEEDED) Shared library: [librt.so.1] | |
0x0000000000000001 (NEEDED) Shared library: [libgfortran.so.5] | |
0x0000000000000001 (NEEDED) Shared library: [libdl.so.2] | |
0x0000000000000001 (NEEDED) Shared library: [libflexiblas.so.3] | |
0x0000000000000001 (NEEDED) Shared library: [libpthread.so.0] | |
0x0000000000000001 (NEEDED) Shared library: [libnetcdf.so.19] | |
0x0000000000000001 (NEEDED) Shared library: [libnetcdff.so.7] | |
0x0000000000000001 (NEEDED) Shared library: [libm.so.6] | |
0x0000000000000001 (NEEDED) Shared library: [libnetcdf_c++4.so.1] | |
0x0000000000000001 (NEEDED) Shared library: [libmpi.so.40] | |
0x0000000000000001 (NEEDED) Shared library: [libstdc++.so.6] | |
0x0000000000000001 (NEEDED) Shared library: [libgomp.so.1] | |
0x0000000000000001 (NEEDED) Shared library: [libgcc_s.so.1] | |
0x0000000000000001 (NEEDED) Shared library: [libc.so.6] | |
0x000000000000000f (RPATH) Library rpath: [/user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib:/user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64:$ORIGIN:$ORIGIN/../lib:$ORIGIN/../lib64:/rhea/scratch/brussel/vo/000/bvo00005/vsc10122/easybuild/install/zen4/build/ESMF/8.6.0/foss-2023a/esmf-8.6.0//lib/libO/Linux.gfortran.64.openmpi.default:/apps/brussel/RL8/zen4/software/netCDF/4.9.2-gompi-2023a/lib64:/apps/brussel/RL8/zen4/software/netCDF-Fortran/4.6.1-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/bzip2/1.0.8-GCCcore-12.3.0/lib64:/apps/brussel/RL8/zen4/software/GCCcore/12.3.0/lib64:/apps/brussel/RL8/zen4/software/GCCcore/12.3.0/lib:/apps/brussel/RL8/zen4/software/libarchive/3.6.2-GCCcore-12.3.0/lib64:/user/brussel/101/vsc10122/easybuild/install/zen4/software/netCDF-C++4/4.3.1-gompi-2023a/lib64:/apps/brussel/RL8/zen4/software/FFTW.MPI/3.3.10-gompi-2023a/lib64:/apps/brussel/RL8/zen4/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib64:/apps/brussel/RL8/zen4/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib64:/apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib:/apps/brussel/RL8/zen4/software/hwloc/2.9.1-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/libevent/2.1.12-GCCcore-12.3.0/lib:/vscmnt/brussel_pixiu_apps/_apps_brussel/RL8/zen4/software/GCCcore/12.3.0/bin/../lib/gcc/x86_64-pc-linux-gnu/12.3.0:/vscmnt/brussel_pixiu_apps/_apps_brussel/RL8/zen4/software/GCCcore/12.3.0/bin/../lib/gcc:/apps/brussel/RL8/zen4/software/zstd/1.5.5-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/lz4/1.9.4-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/HDF5/1.14.0-gompi-2023a/lib/../lib64:/apps/brussel/RL8/zen4/software/Szip/2.1.1-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/cURL/8.0.1-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/ncurses/6.4-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/FFTW/3.3.10-GCC-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/OpenBLAS/0.3.23-GCC-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/UCC/1.2.0-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/PMIx/4.2.4-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/UCX/1.14.1-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/OpenSSL/1.1/lib/../lib64:/apps/brussel/RL8/zen4/software/libpciaccess/0.17-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/libxml2/2.11.4-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/XZ/5.4.2-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/numactl/2.0.16-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/binutils/2.40-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/zlib/1.2.13-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/zstd/1.5.5-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/lz4/1.9.4-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/HDF5/1.14.0-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/Szip/2.1.1-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/cURL/8.0.1-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/ncurses/6.4-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/FFTW/3.3.10-GCC-12.3.0/lib:/apps/brussel/RL8/zen4/software/OpenBLAS/0.3.23-GCC-12.3.0/lib:/apps/brussel/RL8/zen4/software/UCC/1.2.0-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/PMIx/4.2.4-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/UCX/1.14.1-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/OpenSSL/1.1/lib:/apps/brussel/RL8/zen4/software/libpciaccess/0.17-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/libxml2/2.11.4-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/XZ/5.4.2-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/numactl/2.0.16-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/binutils/2.40-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/zlib/1.2.13-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/libarchive/3.6.2-GCCcore-12.3.0/lib:/user/brussel/101/vsc10122/easybuild/install/zen4/software/netCDF-C++4/4.3.1-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/netCDF-Fortran/4.6.1-gompi-2023a/lib64:/apps/brussel/RL8/zen4/software/netCDF/4.9.2-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/FFTW.MPI/3.3.10-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib:/apps/brussel/RL8/zen4/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib:/apps/brussel/RL8/zen4/software/bzip2/1.0.8-GCCcore-12.3.0/lib:/vscmnt/brussel_pixiu_apps/_apps_brussel/RL8/zen4/software/GCCcore/12.3.0/bin/../lib/gcc/x86_64-pc-linux-gnu/12.3.0/../../../../lib64/] | |
0x000000000000000c (INIT) 0x6000 | |
0x000000000000000d (FINI) 0xe500 | |
0x0000000000000019 (INIT_ARRAY) 0x14ce0 | |
0x000000000000001b (INIT_ARRAYSZ) 40 (bytes) | |
0x000000000000001a (FINI_ARRAY) 0x14d08 | |
0x000000000000001c (FINI_ARRAYSZ) 8 (bytes) | |
0x0000000000000004 (HASH) 0x200 | |
0x000000006ffffef5 (GNU_HASH) 0x898 | |
0x0000000000000005 (STRTAB) 0x24e0 | |
0x0000000000000006 (SYMTAB) 0xff8 | |
0x000000000000000a (STRSZ) 8016 (bytes) | |
0x000000000000000b (SYMENT) 24 (bytes) | |
0x0000000000000003 (PLTGOT) 0x14fe8 | |
0x0000000000000002 (PLTRELSZ) 3504 (bytes) | |
0x0000000000000014 (PLTREL) RELA | |
0x0000000000000017 (JMPREL) 0x47d8 | |
0x0000000000000007 (RELA) 0x46a0 | |
0x0000000000000008 (RELASZ) 312 (bytes) | |
0x0000000000000009 (RELAENT) 24 (bytes) | |
0x000000006ffffffe (VERNEED) 0x45f0 | |
0x000000006fffffff (VERNEEDNUM) 4 | |
0x000000006ffffff0 (VERSYM) 0x4430 | |
0x000000006ffffff9 (RELACOUNT) 7 | |
0x0000000000000000 (NULL) 0x0 | |
== 2024-06-17 18:34:02,598 run.py:504 INFO Shell command completed successfully (see output above): readelf -d /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib/libesmftrace_preload.so | |
== 2024-06-17 18:34:02,599 run.py:376 INFO Path to bash that will be used to run shell commands: /bin/bash | |
== 2024-06-17 18:34:02,599 run.py:398 INFO Running shell command 'file /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf_fullylinked.so' in /rhea/scratch/brussel/vo/000/bvo00005/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a | |
== 2024-06-17 18:34:02,607 run.py:501 INFO Output of 'file ...' shell command (stdout + stderr): | |
/user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf_fullylinked.so: ELF 64-bit LSB shared object, x86-64, version 1 (GNU/Linux), dynamically linked, not stripped | |
== 2024-06-17 18:34:02,607 run.py:504 INFO Shell command completed successfully (see output above): file /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf_fullylinked.so | |
== 2024-06-17 18:34:02,607 run.py:376 INFO Path to bash that will be used to run shell commands: /bin/bash | |
== 2024-06-17 18:34:02,607 run.py:398 INFO Running shell command 'ldd /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf_fullylinked.so' in /rhea/scratch/brussel/vo/000/bvo00005/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a | |
== 2024-06-17 18:34:02,667 run.py:501 INFO Output of 'ldd ...' shell command (stdout + stderr): | |
linux-vdso.so.1 (0x00007ffce6354000) | |
librt.so.1 => /lib64/librt.so.1 (0x00001458d677c000) | |
libgfortran.so.5 => /apps/brussel/RL8/zen4/software/GCCcore/12.3.0/lib64/libgfortran.so.5 (0x00001458d64ae000) | |
libdl.so.2 => /lib64/libdl.so.2 (0x00001458d62aa000) | |
libflexiblas.so.3 => /apps/brussel/RL8/zen4/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib64/libflexiblas.so.3 (0x00001458d5ec5000) | |
libpthread.so.0 => /lib64/libpthread.so.0 (0x00001458d5ca5000) | |
libnetcdf.so.19 => /apps/brussel/RL8/zen4/software/netCDF/4.9.2-gompi-2023a/lib64/libnetcdf.so.19 (0x00001458d5a36000) | |
libnetcdff.so.7 => /apps/brussel/RL8/zen4/software/netCDF-Fortran/4.6.1-gompi-2023a/lib/libnetcdff.so.7 (0x00001458d8492000) | |
libm.so.6 => /lib64/libm.so.6 (0x00001458d56b4000) | |
libmvec.so.1 => /lib64/libmvec.so.1 (0x00001458d5489000) | |
libnetcdf_c++4.so.1 => /user/brussel/101/vsc10122/easybuild/install/zen4/software/netCDF-C++4/4.3.1-gompi-2023a/lib64/libnetcdf_c++4.so.1 (0x00001458d843e000) | |
libmpi.so.40 => /apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib/libmpi.so.40 (0x00001458d5359000) | |
libstdc++.so.6 => /apps/brussel/RL8/zen4/software/GCCcore/12.3.0/lib64/libstdc++.so.6 (0x00001458d5130000) | |
libgomp.so.1 => /apps/brussel/RL8/zen4/software/GCCcore/12.3.0/lib64/libgomp.so.1 (0x00001458d83f5000) | |
libgcc_s.so.1 => /apps/brussel/RL8/zen4/software/GCCcore/12.3.0/lib64/libgcc_s.so.1 (0x00001458d83d4000) | |
libc.so.6 => /lib64/libc.so.6 (0x00001458d4d6b000) | |
libquadmath.so.0 => /apps/brussel/RL8/zen4/software/GCCcore/12.3.0/lib/../lib64/libquadmath.so.0 (0x00001458d838b000) | |
/lib64/ld-linux-x86-64.so.2 (0x00001458d8340000) | |
libhdf5_hl.so.310 => not found | |
libhdf5.so.310 => not found | |
libz.so.1 => /lib64/libz.so.1 (0x00001458d4b53000) | |
libzstd.so.1 => /lib64/libzstd.so.1 (0x00001458d48af000) | |
libbz2.so.1.0 => not found | |
libsz.so.2 => /lib64/libsz.so.2 (0x00001458d46ac000) | |
libcurl.so.4 => /lib64/libcurl.so.4 (0x00001458d441d000) | |
libxml2.so.2 => /lib64/libxml2.so.2 (0x00001458d40b5000) | |
libmpi_usempif08.so.40 => /apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib/libmpi_usempif08.so.40 (0x00001458d407c000) | |
libmpi_usempi_ignore_tkr.so.40 => /apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib/libmpi_usempi_ignore_tkr.so.40 (0x00001458d837a000) | |
libmpi_mpifh.so.40 => /apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib/libmpi_mpifh.so.40 (0x00001458d4010000) | |
libopen-rte.so.40 => /apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib/libopen-rte.so.40 (0x00001458d3f55000) | |
libopen-pal.so.40 => /apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib/libopen-pal.so.40 (0x00001458d3ea2000) | |
libutil.so.1 => /lib64/libutil.so.1 (0x00001458d3c9e000) | |
libhwloc.so.15 => /apps/brussel/RL8/zen4/software/hwloc/2.9.1-GCCcore-12.3.0/lib/libhwloc.so.15 (0x00001458d3c3e000) | |
libpciaccess.so.0 => /apps/brussel/RL8/zen4/software/libpciaccess/0.17-GCCcore-12.3.0/lib/libpciaccess.so.0 (0x00001458d3c32000) | |
liblzma.so.5 => /apps/brussel/RL8/zen4/software/XZ/5.4.2-GCCcore-12.3.0/lib/liblzma.so.5 (0x00001458d3c04000) | |
libevent_core-2.1.so.7 => /apps/brussel/RL8/zen4/software/libevent/2.1.12-GCCcore-12.3.0/lib/libevent_core-2.1.so.7 (0x00001458d3bcd000) | |
libevent_pthreads-2.1.so.7 => /apps/brussel/RL8/zen4/software/libevent/2.1.12-GCCcore-12.3.0/lib/libevent_pthreads-2.1.so.7 (0x00001458d8373000) | |
libaec.so.0 => /lib64/libaec.so.0 (0x00001458d39c5000) | |
libnghttp2.so.14 => /lib64/libnghttp2.so.14 (0x00001458d379e000) | |
libidn2.so.0 => /lib64/libidn2.so.0 (0x00001458d3580000) | |
libssh.so.4 => /lib64/libssh.so.4 (0x00001458d3310000) | |
libpsl.so.5 => /lib64/libpsl.so.5 (0x00001458d30ff000) | |
libssl.so.1.1 => /apps/brussel/RL8/zen4/software/OpenSSL/1.1/lib/../lib64/libssl.so.1.1 (0x00001458d2e6b000) | |
libcrypto.so.1.1 => /apps/brussel/RL8/zen4/software/OpenSSL/1.1/lib/../lib64/libcrypto.so.1.1 (0x00001458d2980000) | |
libgssapi_krb5.so.2 => /lib64/libgssapi_krb5.so.2 (0x00001458d272b000) | |
libkrb5.so.3 => /lib64/libkrb5.so.3 (0x00001458d2440000) | |
libk5crypto.so.3 => /lib64/libk5crypto.so.3 (0x00001458d2229000) | |
libcom_err.so.2 => /lib64/libcom_err.so.2 (0x00001458d2025000) | |
libldap-2.4.so.2 => /lib64/libldap-2.4.so.2 (0x00001458d1dd6000) | |
liblber-2.4.so.2 => /lib64/liblber-2.4.so.2 (0x00001458d1bc4000) | |
libbrotlidec.so.1 => /lib64/libbrotlidec.so.1 (0x00001458d19b7000) | |
libunistring.so.2 => /lib64/libunistring.so.2 (0x00001458d1636000) | |
libkrb5support.so.0 => /lib64/libkrb5support.so.0 (0x00001458d1425000) | |
libkeyutils.so.1 => /lib64/libkeyutils.so.1 (0x00001458d121f000) | |
libresolv.so.2 => /lib64/libresolv.so.2 (0x00001458d1007000) | |
libsasl2.so.3 => /lib64/libsasl2.so.3 (0x00001458d0de9000) | |
libbrotlicommon.so.1 => /lib64/libbrotlicommon.so.1 (0x00001458d0bc8000) | |
libselinux.so.1 => /lib64/libselinux.so.1 (0x00001458d099d000) | |
libcrypt.so.1 => /lib64/libcrypt.so.1 (0x00001458d0772000) | |
libpcre2-8.so.0 => /lib64/libpcre2-8.so.0 (0x00001458d04ee000) | |
== 2024-06-17 18:34:02,667 run.py:504 INFO Shell command completed successfully (see output above): ldd /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf_fullylinked.so | |
== 2024-06-17 18:34:02,669 easyblock.py:3178 WARNING Library libhdf5_hl.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf_fullylinked.so | |
== 2024-06-17 18:34:02,669 easyblock.py:3178 WARNING Library libhdf5.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf_fullylinked.so | |
== 2024-06-17 18:34:02,669 easyblock.py:3178 WARNING Library libbz2.so.1.0 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf_fullylinked.so | |
== 2024-06-17 18:34:02,669 run.py:331 INFO Auto-enabling streaming output of 'readelf -d /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf_fullylinked.so' command because logging to stdout is enabled | |
== 2024-06-17 18:34:02,670 run.py:341 INFO run_shell_cmd: Output of "readelf -d /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf_fullylinked.so" will be logged to /tmp/eb-pg4acmy6/run-shell-cmd-output/readelf-gnzx63j4/out.txt | |
== 2024-06-17 18:34:02,670 run.py:376 INFO Path to bash that will be used to run shell commands: /bin/bash | |
== 2024-06-17 18:34:02,670 run.py:398 INFO Running shell command 'readelf -d /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf_fullylinked.so' in /rhea/scratch/brussel/vo/000/bvo00005/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a | |
== 2024-06-17 18:34:02,781 run.py:501 INFO Output of 'readelf ...' shell command (stdout + stderr): | |
Dynamic section at offset 0x170eaf8 contains 40 entries: | |
Tag Type Name/Value | |
0x0000000000000001 (NEEDED) Shared library: [librt.so.1] | |
0x0000000000000001 (NEEDED) Shared library: [libgfortran.so.5] | |
0x0000000000000001 (NEEDED) Shared library: [libdl.so.2] | |
0x0000000000000001 (NEEDED) Shared library: [libflexiblas.so.3] | |
0x0000000000000001 (NEEDED) Shared library: [libpthread.so.0] | |
0x0000000000000001 (NEEDED) Shared library: [libnetcdf.so.19] | |
0x0000000000000001 (NEEDED) Shared library: [libnetcdff.so.7] | |
0x0000000000000001 (NEEDED) Shared library: [libm.so.6] | |
0x0000000000000001 (NEEDED) Shared library: [libmvec.so.1] | |
0x0000000000000001 (NEEDED) Shared library: [libnetcdf_c++4.so.1] | |
0x0000000000000001 (NEEDED) Shared library: [libmpi.so.40] | |
0x0000000000000001 (NEEDED) Shared library: [libstdc++.so.6] | |
0x0000000000000001 (NEEDED) Shared library: [libgomp.so.1] | |
0x0000000000000001 (NEEDED) Shared library: [libgcc_s.so.1] | |
0x0000000000000001 (NEEDED) Shared library: [libc.so.6] | |
0x000000000000000f (RPATH) Library rpath: [/user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib:/user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64:$ORIGIN:$ORIGIN/../lib:$ORIGIN/../lib64:/rhea/scratch/brussel/vo/000/bvo00005/vsc10122/easybuild/install/zen4/build/ESMF/8.6.0/foss-2023a/esmf-8.6.0//lib/libO/Linux.gfortran.64.openmpi.default:/apps/brussel/RL8/zen4/software/netCDF/4.9.2-gompi-2023a/lib64:/apps/brussel/RL8/zen4/software/netCDF-Fortran/4.6.1-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/bzip2/1.0.8-GCCcore-12.3.0/lib64:/apps/brussel/RL8/zen4/software/GCCcore/12.3.0/lib64:/apps/brussel/RL8/zen4/software/GCCcore/12.3.0/lib:/apps/brussel/RL8/zen4/software/libarchive/3.6.2-GCCcore-12.3.0/lib64:/user/brussel/101/vsc10122/easybuild/install/zen4/software/netCDF-C++4/4.3.1-gompi-2023a/lib64:/apps/brussel/RL8/zen4/software/FFTW.MPI/3.3.10-gompi-2023a/lib64:/apps/brussel/RL8/zen4/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib64:/apps/brussel/RL8/zen4/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib64:/apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib:/apps/brussel/RL8/zen4/software/hwloc/2.9.1-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/libevent/2.1.12-GCCcore-12.3.0/lib:/vscmnt/brussel_pixiu_apps/_apps_brussel/RL8/zen4/software/GCCcore/12.3.0/bin/../lib/gcc/x86_64-pc-linux-gnu/12.3.0:/vscmnt/brussel_pixiu_apps/_apps_brussel/RL8/zen4/software/GCCcore/12.3.0/bin/../lib/gcc:/apps/brussel/RL8/zen4/software/zstd/1.5.5-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/lz4/1.9.4-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/HDF5/1.14.0-gompi-2023a/lib/../lib64:/apps/brussel/RL8/zen4/software/Szip/2.1.1-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/cURL/8.0.1-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/ncurses/6.4-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/FFTW/3.3.10-GCC-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/OpenBLAS/0.3.23-GCC-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/UCC/1.2.0-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/PMIx/4.2.4-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/UCX/1.14.1-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/OpenSSL/1.1/lib/../lib64:/apps/brussel/RL8/zen4/software/libpciaccess/0.17-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/libxml2/2.11.4-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/XZ/5.4.2-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/numactl/2.0.16-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/binutils/2.40-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/zlib/1.2.13-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/zstd/1.5.5-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/lz4/1.9.4-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/HDF5/1.14.0-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/Szip/2.1.1-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/cURL/8.0.1-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/ncurses/6.4-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/FFTW/3.3.10-GCC-12.3.0/lib:/apps/brussel/RL8/zen4/software/OpenBLAS/0.3.23-GCC-12.3.0/lib:/apps/brussel/RL8/zen4/software/UCC/1.2.0-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/PMIx/4.2.4-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/UCX/1.14.1-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/OpenSSL/1.1/lib:/apps/brussel/RL8/zen4/software/libpciaccess/0.17-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/libxml2/2.11.4-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/XZ/5.4.2-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/numactl/2.0.16-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/binutils/2.40-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/zlib/1.2.13-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/libarchive/3.6.2-GCCcore-12.3.0/lib:/user/brussel/101/vsc10122/easybuild/install/zen4/software/netCDF-C++4/4.3.1-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/netCDF-Fortran/4.6.1-gompi-2023a/lib64:/apps/brussel/RL8/zen4/software/netCDF/4.9.2-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/FFTW.MPI/3.3.10-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib:/apps/brussel/RL8/zen4/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib:/apps/brussel/RL8/zen4/software/bzip2/1.0.8-GCCcore-12.3.0/lib:/vscmnt/brussel_pixiu_apps/_apps_brussel/RL8/zen4/software/GCCcore/12.3.0/bin/../lib/gcc/x86_64-pc-linux-gnu/12.3.0/../../../../lib64/] | |
0x000000000000000c (INIT) 0x284000 | |
0x000000000000000d (FINI) 0x139f690 | |
0x0000000000000019 (INIT_ARRAY) 0x1702398 | |
0x000000000000001b (INIT_ARRAYSZ) 2336 (bytes) | |
0x000000000000001a (FINI_ARRAY) 0x1702cb8 | |
0x000000000000001c (FINI_ARRAYSZ) 8 (bytes) | |
0x0000000000000004 (HASH) 0x200 | |
0x000000006ffffef5 (GNU_HASH) 0x24b50 | |
0x0000000000000005 (STRTAB) 0xc7e60 | |
0x0000000000000006 (SYMTAB) 0x4c938 | |
0x000000000000000a (STRSZ) 1317615 (bytes) | |
0x000000000000000b (SYMENT) 24 (bytes) | |
0x0000000000000003 (PLTGOT) 0x1710fe8 | |
0x0000000000000002 (PLTRELSZ) 274296 (bytes) | |
0x0000000000000014 (PLTREL) RELA | |
0x0000000000000017 (JMPREL) 0x240f70 | |
0x0000000000000007 (RELA) 0x214060 | |
0x0000000000000008 (RELASZ) 184080 (bytes) | |
0x0000000000000009 (RELAENT) 24 (bytes) | |
0x000000006ffffffe (VERNEED) 0x213dc0 | |
0x000000006fffffff (VERNEEDNUM) 10 | |
0x000000006ffffff0 (VERSYM) 0x209950 | |
0x000000006ffffff9 (RELACOUNT) 2172 | |
0x0000000000000000 (NULL) 0x0 | |
== 2024-06-17 18:34:02,781 run.py:504 INFO Shell command completed successfully (see output above): readelf -d /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf_fullylinked.so | |
== 2024-06-17 18:34:02,782 run.py:376 INFO Path to bash that will be used to run shell commands: /bin/bash | |
== 2024-06-17 18:34:02,782 run.py:398 INFO Running shell command 'file /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/preload.sh' in /rhea/scratch/brussel/vo/000/bvo00005/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a | |
== 2024-06-17 18:34:02,789 run.py:501 INFO Output of 'file ...' shell command (stdout + stderr): | |
/user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/preload.sh: POSIX shell script, ASCII text executable | |
== 2024-06-17 18:34:02,789 run.py:504 INFO Shell command completed successfully (see output above): file /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/preload.sh | |
== 2024-06-17 18:34:02,789 run.py:376 INFO Path to bash that will be used to run shell commands: /bin/bash | |
== 2024-06-17 18:34:02,789 run.py:398 INFO Running shell command 'file /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf.so' in /rhea/scratch/brussel/vo/000/bvo00005/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a | |
== 2024-06-17 18:34:02,798 run.py:501 INFO Output of 'file ...' shell command (stdout + stderr): | |
/user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf.so: ELF 64-bit LSB shared object, x86-64, version 1 (GNU/Linux), dynamically linked, not stripped | |
== 2024-06-17 18:34:02,798 run.py:504 INFO Shell command completed successfully (see output above): file /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf.so | |
== 2024-06-17 18:34:02,799 run.py:376 INFO Path to bash that will be used to run shell commands: /bin/bash | |
== 2024-06-17 18:34:02,799 run.py:398 INFO Running shell command 'ldd /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf.so' in /rhea/scratch/brussel/vo/000/bvo00005/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a | |
== 2024-06-17 18:34:02,842 run.py:501 INFO Output of 'ldd ...' shell command (stdout + stderr): | |
linux-vdso.so.1 (0x00007ffde7d3e000) | |
libmpi.so.40 => /apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib/libmpi.so.40 (0x000014f2f8f93000) | |
libstdc++.so.6 => /vscmnt/brussel_pixiu_apps/_apps_brussel/RL8/zen4/software/GCCcore/12.3.0/bin/../lib/gcc/x86_64-pc-linux-gnu/12.3.0/../../../../lib64/libstdc++.so.6 (0x000014f2f72df000) | |
libm.so.6 => /lib64/libm.so.6 (0x000014f2f6f5d000) | |
libmvec.so.1 => /lib64/libmvec.so.1 (0x000014f2f6d32000) | |
libgomp.so.1 => /vscmnt/brussel_pixiu_apps/_apps_brussel/RL8/zen4/software/GCCcore/12.3.0/bin/../lib/gcc/x86_64-pc-linux-gnu/12.3.0/../../../../lib64/libgomp.so.1 (0x000014f2f8f3d000) | |
libgcc_s.so.1 => /vscmnt/brussel_pixiu_apps/_apps_brussel/RL8/zen4/software/GCCcore/12.3.0/bin/../lib/gcc/x86_64-pc-linux-gnu/12.3.0/../../../../lib64/libgcc_s.so.1 (0x000014f2f8f1c000) | |
libpthread.so.0 => /lib64/libpthread.so.0 (0x000014f2f6b12000) | |
libc.so.6 => /lib64/libc.so.6 (0x000014f2f674d000) | |
libopen-rte.so.40 => /apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib/libopen-rte.so.40 (0x000014f2f6692000) | |
libopen-pal.so.40 => /apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib/libopen-pal.so.40 (0x000014f2f65df000) | |
librt.so.1 => /lib64/librt.so.1 (0x000014f2f63d7000) | |
libutil.so.1 => /lib64/libutil.so.1 (0x000014f2f61d3000) | |
libhwloc.so.15 => /apps/brussel/RL8/zen4/software/hwloc/2.9.1-GCCcore-12.3.0/lib/libhwloc.so.15 (0x000014f2f6173000) | |
libpciaccess.so.0 => /apps/brussel/RL8/zen4/software/libpciaccess/0.17-GCCcore-12.3.0/lib/libpciaccess.so.0 (0x000014f2f8f0c000) | |
libxml2.so.2 => /apps/brussel/RL8/zen4/software/libxml2/2.11.4-GCCcore-12.3.0/lib/libxml2.so.2 (0x000014f2f600e000) | |
libdl.so.2 => /lib64/libdl.so.2 (0x000014f2f5e0a000) | |
libz.so.1 => /apps/brussel/RL8/zen4/software/zlib/1.2.13-GCCcore-12.3.0/lib/../lib64/libz.so.1 (0x000014f2f8ef0000) | |
liblzma.so.5 => /apps/brussel/RL8/zen4/software/XZ/5.4.2-GCCcore-12.3.0/lib/liblzma.so.5 (0x000014f2f5ddc000) | |
libevent_core-2.1.so.7 => /apps/brussel/RL8/zen4/software/libevent/2.1.12-GCCcore-12.3.0/lib/libevent_core-2.1.so.7 (0x000014f2f5da5000) | |
libevent_pthreads-2.1.so.7 => /apps/brussel/RL8/zen4/software/libevent/2.1.12-GCCcore-12.3.0/lib/libevent_pthreads-2.1.so.7 (0x000014f2f8ee9000) | |
/lib64/ld-linux-x86-64.so.2 (0x000014f2f8e9b000) | |
== 2024-06-17 18:34:02,842 run.py:504 INFO Shell command completed successfully (see output above): ldd /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf.so | |
== 2024-06-17 18:34:02,844 run.py:331 INFO Auto-enabling streaming output of 'readelf -d /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf.so' command because logging to stdout is enabled | |
== 2024-06-17 18:34:02,844 run.py:341 INFO run_shell_cmd: Output of "readelf -d /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf.so" will be logged to /tmp/eb-pg4acmy6/run-shell-cmd-output/readelf-va_57mc1/out.txt | |
== 2024-06-17 18:34:02,844 run.py:376 INFO Path to bash that will be used to run shell commands: /bin/bash | |
== 2024-06-17 18:34:02,845 run.py:398 INFO Running shell command 'readelf -d /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf.so' in /rhea/scratch/brussel/vo/000/bvo00005/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a | |
== 2024-06-17 18:34:02,955 run.py:501 INFO Output of 'readelf ...' shell command (stdout + stderr): | |
Dynamic section at offset 0x16e6bd8 contains 33 entries: | |
Tag Type Name/Value | |
0x0000000000000001 (NEEDED) Shared library: [libmpi.so.40] | |
0x0000000000000001 (NEEDED) Shared library: [libstdc++.so.6] | |
0x0000000000000001 (NEEDED) Shared library: [libm.so.6] | |
0x0000000000000001 (NEEDED) Shared library: [libmvec.so.1] | |
0x0000000000000001 (NEEDED) Shared library: [libgomp.so.1] | |
0x0000000000000001 (NEEDED) Shared library: [libgcc_s.so.1] | |
0x0000000000000001 (NEEDED) Shared library: [libpthread.so.0] | |
0x0000000000000001 (NEEDED) Shared library: [libc.so.6] | |
0x000000000000000f (RPATH) Library rpath: [/user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib:/user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64:$ORIGIN:$ORIGIN/../lib:$ORIGIN/../lib64:/apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib:/apps/brussel/RL8/zen4/software/hwloc/2.9.1-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/libevent/2.1.12-GCCcore-12.3.0/lib:/vscmnt/brussel_pixiu_apps/_apps_brussel/RL8/zen4/software/GCCcore/12.3.0/bin/../lib/gcc/x86_64-pc-linux-gnu/12.3.0:/vscmnt/brussel_pixiu_apps/_apps_brussel/RL8/zen4/software/GCCcore/12.3.0/bin/../lib/gcc:/apps/brussel/RL8/zen4/software/libarchive/3.6.2-GCCcore-12.3.0/lib/../lib64:/user/brussel/101/vsc10122/easybuild/install/zen4/software/netCDF-C++4/4.3.1-gompi-2023a/lib/../lib64:/apps/brussel/RL8/zen4/software/netCDF-Fortran/4.6.1-gompi-2023a/lib/../lib64:/apps/brussel/RL8/zen4/software/netCDF/4.9.2-gompi-2023a/lib/../lib64:/apps/brussel/RL8/zen4/software/zstd/1.5.5-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/lz4/1.9.4-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/HDF5/1.14.0-gompi-2023a/lib/../lib64:/apps/brussel/RL8/zen4/software/Szip/2.1.1-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/cURL/8.0.1-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/bzip2/1.0.8-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/ncurses/6.4-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib/../lib64:/apps/brussel/RL8/zen4/software/FFTW.MPI/3.3.10-gompi-2023a/lib/../lib64:/apps/brussel/RL8/zen4/software/FFTW/3.3.10-GCC-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/OpenBLAS/0.3.23-GCC-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/UCC/1.2.0-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/PMIx/4.2.4-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/UCX/1.14.1-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/OpenSSL/1.1/lib/../lib64:/apps/brussel/RL8/zen4/software/libpciaccess/0.17-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/libxml2/2.11.4-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/XZ/5.4.2-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/numactl/2.0.16-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/binutils/2.40-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/zlib/1.2.13-GCCcore-12.3.0/lib/../lib64:/vscmnt/brussel_pixiu_apps/_apps_brussel/RL8/zen4/software/GCCcore/12.3.0/bin/../lib/gcc/x86_64-pc-linux-gnu/12.3.0/../../../../lib64:/vscmnt/brussel_pixiu_apps/_apps_brussel/RL8/zen4/software/GCCcore/12.3.0/bin/../lib/gcc/x86_64-pc-linux-gnu/12.3.0/../../..:/apps/brussel/RL8/zen4/software/libarchive/3.6.2-GCCcore-12.3.0/lib:/user/brussel/101/vsc10122/easybuild/install/zen4/software/netCDF-C++4/4.3.1-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/netCDF-Fortran/4.6.1-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/netCDF/4.9.2-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/zstd/1.5.5-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/lz4/1.9.4-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/HDF5/1.14.0-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/Szip/2.1.1-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/cURL/8.0.1-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/bzip2/1.0.8-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/ncurses/6.4-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib:/apps/brussel/RL8/zen4/software/FFTW.MPI/3.3.10-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/FFTW/3.3.10-GCC-12.3.0/lib:/apps/brussel/RL8/zen4/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib:/apps/brussel/RL8/zen4/software/OpenBLAS/0.3.23-GCC-12.3.0/lib:/apps/brussel/RL8/zen4/software/UCC/1.2.0-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/PMIx/4.2.4-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/UCX/1.14.1-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/OpenSSL/1.1/lib:/apps/brussel/RL8/zen4/software/libpciaccess/0.17-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/libxml2/2.11.4-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/XZ/5.4.2-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/numactl/2.0.16-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/binutils/2.40-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/zlib/1.2.13-GCCcore-12.3.0/lib] | |
0x000000000000000c (INIT) 0x27f000 | |
0x000000000000000d (FINI) 0x137c0a4 | |
0x0000000000000019 (INIT_ARRAY) 0x16da478 | |
0x000000000000001b (INIT_ARRAYSZ) 2336 (bytes) | |
0x000000000000001a (FINI_ARRAY) 0x16dad98 | |
0x000000000000001c (FINI_ARRAYSZ) 8 (bytes) | |
0x0000000000000004 (HASH) 0x200 | |
0x000000006ffffef5 (GNU_HASH) 0x245c0 | |
0x0000000000000005 (STRTAB) 0xc5278 | |
0x0000000000000006 (SYMTAB) 0x4bec8 | |
0x000000000000000a (STRSZ) 1310942 (bytes) | |
0x000000000000000b (SYMENT) 24 (bytes) | |
0x0000000000000003 (PLTGOT) 0x16e8fe8 | |
0x0000000000000002 (PLTRELSZ) 269832 (bytes) | |
0x0000000000000014 (PLTREL) RELA | |
0x0000000000000017 (JMPREL) 0x23c4f0 | |
0x0000000000000007 (RELA) 0x20f730 | |
0x0000000000000008 (RELASZ) 183744 (bytes) | |
0x0000000000000009 (RELAENT) 24 (bytes) | |
0x000000006ffffffe (VERNEED) 0x20f500 | |
0x000000006fffffff (VERNEEDNUM) 7 | |
0x000000006ffffff0 (VERSYM) 0x205356 | |
0x000000006ffffff9 (RELACOUNT) 2172 | |
0x0000000000000000 (NULL) 0x0 | |
== 2024-06-17 18:34:02,956 run.py:504 INFO Shell command completed successfully (see output above): readelf -d /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf.so | |
== 2024-06-17 18:34:02,956 run.py:376 INFO Path to bash that will be used to run shell commands: /bin/bash | |
== 2024-06-17 18:34:02,956 run.py:398 INFO Running shell command 'file /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libpioc.a' in /rhea/scratch/brussel/vo/000/bvo00005/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a | |
== 2024-06-17 18:34:02,963 run.py:501 INFO Output of 'file ...' shell command (stdout + stderr): | |
/user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libpioc.a: current ar archive | |
== 2024-06-17 18:34:02,963 run.py:504 INFO Shell command completed successfully (see output above): file /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libpioc.a | |
== 2024-06-17 18:34:02,964 run.py:376 INFO Path to bash that will be used to run shell commands: /bin/bash | |
== 2024-06-17 18:34:02,964 run.py:398 INFO Running shell command 'file /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmftrace_static.a' in /rhea/scratch/brussel/vo/000/bvo00005/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a | |
== 2024-06-17 18:34:02,969 run.py:501 INFO Output of 'file ...' shell command (stdout + stderr): | |
/user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmftrace_static.a: current ar archive | |
== 2024-06-17 18:34:02,969 run.py:504 INFO Shell command completed successfully (see output above): file /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmftrace_static.a | |
== 2024-06-17 18:34:02,970 run.py:376 INFO Path to bash that will be used to run shell commands: /bin/bash | |
== 2024-06-17 18:34:02,970 run.py:398 INFO Running shell command 'file /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf.a' in /rhea/scratch/brussel/vo/000/bvo00005/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a | |
== 2024-06-17 18:34:02,976 run.py:501 INFO Output of 'file ...' shell command (stdout + stderr): | |
/user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf.a: current ar archive | |
== 2024-06-17 18:34:02,976 run.py:504 INFO Shell command completed successfully (see output above): file /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf.a | |
== 2024-06-17 18:34:02,976 run.py:376 INFO Path to bash that will be used to run shell commands: /bin/bash | |
== 2024-06-17 18:34:02,977 run.py:398 INFO Running shell command 'file /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/esmf.mk' in /rhea/scratch/brussel/vo/000/bvo00005/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a | |
== 2024-06-17 18:34:02,987 run.py:501 INFO Output of 'file ...' shell command (stdout + stderr): | |
/user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/esmf.mk: ASCII text, with very long lines | |
== 2024-06-17 18:34:02,988 run.py:504 INFO Shell command completed successfully (see output above): file /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/esmf.mk | |
== 2024-06-17 18:34:02,988 run.py:376 INFO Path to bash that will be used to run shell commands: /bin/bash | |
== 2024-06-17 18:34:02,988 run.py:398 INFO Running shell command 'file /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmftrace_preload.so' in /rhea/scratch/brussel/vo/000/bvo00005/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a | |
== 2024-06-17 18:34:02,994 run.py:501 INFO Output of 'file ...' shell command (stdout + stderr): | |
/user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmftrace_preload.so: ELF 64-bit LSB shared object, x86-64, version 1 (SYSV), dynamically linked, not stripped | |
== 2024-06-17 18:34:02,994 run.py:504 INFO Shell command completed successfully (see output above): file /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmftrace_preload.so | |
== 2024-06-17 18:34:02,994 run.py:376 INFO Path to bash that will be used to run shell commands: /bin/bash | |
== 2024-06-17 18:34:02,994 run.py:398 INFO Running shell command 'ldd /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmftrace_preload.so' in /rhea/scratch/brussel/vo/000/bvo00005/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a | |
== 2024-06-17 18:34:03,054 run.py:501 INFO Output of 'ldd ...' shell command (stdout + stderr): | |
linux-vdso.so.1 (0x00007fffb3d34000) | |
librt.so.1 => /lib64/librt.so.1 (0x000014b9d2d88000) | |
libgfortran.so.5 => /apps/brussel/RL8/zen4/software/GCCcore/12.3.0/lib64/libgfortran.so.5 (0x000014b9d2aba000) | |
libdl.so.2 => /lib64/libdl.so.2 (0x000014b9d28b6000) | |
libflexiblas.so.3 => /apps/brussel/RL8/zen4/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib64/libflexiblas.so.3 (0x000014b9d24d1000) | |
libpthread.so.0 => /lib64/libpthread.so.0 (0x000014b9d22b1000) | |
libnetcdf.so.19 => /apps/brussel/RL8/zen4/software/netCDF/4.9.2-gompi-2023a/lib64/libnetcdf.so.19 (0x000014b9d2042000) | |
libnetcdff.so.7 => /apps/brussel/RL8/zen4/software/netCDF-Fortran/4.6.1-gompi-2023a/lib/libnetcdff.so.7 (0x000014b9d30cc000) | |
libm.so.6 => /lib64/libm.so.6 (0x000014b9d1cc0000) | |
libnetcdf_c++4.so.1 => /user/brussel/101/vsc10122/easybuild/install/zen4/software/netCDF-C++4/4.3.1-gompi-2023a/lib64/libnetcdf_c++4.so.1 (0x000014b9d3078000) | |
libmpi.so.40 => /apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib/libmpi.so.40 (0x000014b9d1b90000) | |
libstdc++.so.6 => /apps/brussel/RL8/zen4/software/GCCcore/12.3.0/lib64/libstdc++.so.6 (0x000014b9d1967000) | |
libgomp.so.1 => /apps/brussel/RL8/zen4/software/GCCcore/12.3.0/lib64/libgomp.so.1 (0x000014b9d302f000) | |
libgcc_s.so.1 => /apps/brussel/RL8/zen4/software/GCCcore/12.3.0/lib64/libgcc_s.so.1 (0x000014b9d300e000) | |
libc.so.6 => /lib64/libc.so.6 (0x000014b9d15a2000) | |
libquadmath.so.0 => /apps/brussel/RL8/zen4/software/GCCcore/12.3.0/lib/../lib64/libquadmath.so.0 (0x000014b9d2fc5000) | |
/lib64/ld-linux-x86-64.so.2 (0x000014b9d2f90000) | |
libhdf5_hl.so.310 => not found | |
libhdf5.so.310 => not found | |
libz.so.1 => /lib64/libz.so.1 (0x000014b9d138a000) | |
libzstd.so.1 => /lib64/libzstd.so.1 (0x000014b9d10e6000) | |
libbz2.so.1.0 => not found | |
libsz.so.2 => /lib64/libsz.so.2 (0x000014b9d0ee3000) | |
libcurl.so.4 => /lib64/libcurl.so.4 (0x000014b9d0c54000) | |
libxml2.so.2 => /lib64/libxml2.so.2 (0x000014b9d08ec000) | |
libmpi_usempif08.so.40 => /apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib/libmpi_usempif08.so.40 (0x000014b9d08b3000) | |
libmpi_usempi_ignore_tkr.so.40 => /apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib/libmpi_usempi_ignore_tkr.so.40 (0x000014b9d08a6000) | |
libmpi_mpifh.so.40 => /apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib/libmpi_mpifh.so.40 (0x000014b9d083a000) | |
libopen-rte.so.40 => /apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib/libopen-rte.so.40 (0x000014b9d077f000) | |
libopen-pal.so.40 => /apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib/libopen-pal.so.40 (0x000014b9d06cc000) | |
libutil.so.1 => /lib64/libutil.so.1 (0x000014b9d04c8000) | |
libhwloc.so.15 => /apps/brussel/RL8/zen4/software/hwloc/2.9.1-GCCcore-12.3.0/lib/libhwloc.so.15 (0x000014b9d0468000) | |
libpciaccess.so.0 => /apps/brussel/RL8/zen4/software/libpciaccess/0.17-GCCcore-12.3.0/lib/libpciaccess.so.0 (0x000014b9d045c000) | |
liblzma.so.5 => /apps/brussel/RL8/zen4/software/XZ/5.4.2-GCCcore-12.3.0/lib/liblzma.so.5 (0x000014b9d042e000) | |
libevent_core-2.1.so.7 => /apps/brussel/RL8/zen4/software/libevent/2.1.12-GCCcore-12.3.0/lib/libevent_core-2.1.so.7 (0x000014b9d03f7000) | |
libevent_pthreads-2.1.so.7 => /apps/brussel/RL8/zen4/software/libevent/2.1.12-GCCcore-12.3.0/lib/libevent_pthreads-2.1.so.7 (0x000014b9d03f2000) | |
libaec.so.0 => /lib64/libaec.so.0 (0x000014b9d01e8000) | |
libnghttp2.so.14 => /lib64/libnghttp2.so.14 (0x000014b9cffc1000) | |
libidn2.so.0 => /lib64/libidn2.so.0 (0x000014b9cfda3000) | |
libssh.so.4 => /lib64/libssh.so.4 (0x000014b9cfb33000) | |
libpsl.so.5 => /lib64/libpsl.so.5 (0x000014b9cf922000) | |
libssl.so.1.1 => /apps/brussel/RL8/zen4/software/OpenSSL/1.1/lib/../lib64/libssl.so.1.1 (0x000014b9cf68e000) | |
libcrypto.so.1.1 => /apps/brussel/RL8/zen4/software/OpenSSL/1.1/lib/../lib64/libcrypto.so.1.1 (0x000014b9cf1a1000) | |
libgssapi_krb5.so.2 => /lib64/libgssapi_krb5.so.2 (0x000014b9cef4c000) | |
libkrb5.so.3 => /lib64/libkrb5.so.3 (0x000014b9cec61000) | |
libk5crypto.so.3 => /lib64/libk5crypto.so.3 (0x000014b9cea4a000) | |
libcom_err.so.2 => /lib64/libcom_err.so.2 (0x000014b9ce846000) | |
libldap-2.4.so.2 => /lib64/libldap-2.4.so.2 (0x000014b9ce5f7000) | |
liblber-2.4.so.2 => /lib64/liblber-2.4.so.2 (0x000014b9ce3e5000) | |
libbrotlidec.so.1 => /lib64/libbrotlidec.so.1 (0x000014b9ce1d8000) | |
libunistring.so.2 => /lib64/libunistring.so.2 (0x000014b9cde57000) | |
libkrb5support.so.0 => /lib64/libkrb5support.so.0 (0x000014b9cdc46000) | |
libkeyutils.so.1 => /lib64/libkeyutils.so.1 (0x000014b9cda40000) | |
libresolv.so.2 => /lib64/libresolv.so.2 (0x000014b9cd828000) | |
libsasl2.so.3 => /lib64/libsasl2.so.3 (0x000014b9cd60a000) | |
libbrotlicommon.so.1 => /lib64/libbrotlicommon.so.1 (0x000014b9cd3e9000) | |
libselinux.so.1 => /lib64/libselinux.so.1 (0x000014b9cd1be000) | |
libcrypt.so.1 => /lib64/libcrypt.so.1 (0x000014b9ccf93000) | |
libpcre2-8.so.0 => /lib64/libpcre2-8.so.0 (0x000014b9ccd0f000) | |
== 2024-06-17 18:34:03,055 run.py:504 INFO Shell command completed successfully (see output above): ldd /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmftrace_preload.so | |
== 2024-06-17 18:34:03,057 easyblock.py:3178 WARNING Library libhdf5_hl.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmftrace_preload.so | |
== 2024-06-17 18:34:03,057 easyblock.py:3178 WARNING Library libhdf5.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmftrace_preload.so | |
== 2024-06-17 18:34:03,057 easyblock.py:3178 WARNING Library libbz2.so.1.0 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmftrace_preload.so | |
== 2024-06-17 18:34:03,057 run.py:331 INFO Auto-enabling streaming output of 'readelf -d /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmftrace_preload.so' command because logging to stdout is enabled | |
== 2024-06-17 18:34:03,057 run.py:341 INFO run_shell_cmd: Output of "readelf -d /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmftrace_preload.so" will be logged to /tmp/eb-pg4acmy6/run-shell-cmd-output/readelf-0070jbv5/out.txt | |
== 2024-06-17 18:34:03,058 run.py:376 INFO Path to bash that will be used to run shell commands: /bin/bash | |
== 2024-06-17 18:34:03,058 run.py:398 INFO Running shell command 'readelf -d /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmftrace_preload.so' in /rhea/scratch/brussel/vo/000/bvo00005/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a | |
== 2024-06-17 18:34:03,166 run.py:501 INFO Output of 'readelf ...' shell command (stdout + stderr): | |
Dynamic section at offset 0x13d10 contains 39 entries: | |
Tag Type Name/Value | |
0x0000000000000001 (NEEDED) Shared library: [librt.so.1] | |
0x0000000000000001 (NEEDED) Shared library: [libgfortran.so.5] | |
0x0000000000000001 (NEEDED) Shared library: [libdl.so.2] | |
0x0000000000000001 (NEEDED) Shared library: [libflexiblas.so.3] | |
0x0000000000000001 (NEEDED) Shared library: [libpthread.so.0] | |
0x0000000000000001 (NEEDED) Shared library: [libnetcdf.so.19] | |
0x0000000000000001 (NEEDED) Shared library: [libnetcdff.so.7] | |
0x0000000000000001 (NEEDED) Shared library: [libm.so.6] | |
0x0000000000000001 (NEEDED) Shared library: [libnetcdf_c++4.so.1] | |
0x0000000000000001 (NEEDED) Shared library: [libmpi.so.40] | |
0x0000000000000001 (NEEDED) Shared library: [libstdc++.so.6] | |
0x0000000000000001 (NEEDED) Shared library: [libgomp.so.1] | |
0x0000000000000001 (NEEDED) Shared library: [libgcc_s.so.1] | |
0x0000000000000001 (NEEDED) Shared library: [libc.so.6] | |
0x000000000000000f (RPATH) Library rpath: [/user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib:/user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64:$ORIGIN:$ORIGIN/../lib:$ORIGIN/../lib64:/rhea/scratch/brussel/vo/000/bvo00005/vsc10122/easybuild/install/zen4/build/ESMF/8.6.0/foss-2023a/esmf-8.6.0//lib/libO/Linux.gfortran.64.openmpi.default:/apps/brussel/RL8/zen4/software/netCDF/4.9.2-gompi-2023a/lib64:/apps/brussel/RL8/zen4/software/netCDF-Fortran/4.6.1-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/bzip2/1.0.8-GCCcore-12.3.0/lib64:/apps/brussel/RL8/zen4/software/GCCcore/12.3.0/lib64:/apps/brussel/RL8/zen4/software/GCCcore/12.3.0/lib:/apps/brussel/RL8/zen4/software/libarchive/3.6.2-GCCcore-12.3.0/lib64:/user/brussel/101/vsc10122/easybuild/install/zen4/software/netCDF-C++4/4.3.1-gompi-2023a/lib64:/apps/brussel/RL8/zen4/software/FFTW.MPI/3.3.10-gompi-2023a/lib64:/apps/brussel/RL8/zen4/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib64:/apps/brussel/RL8/zen4/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib64:/apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib:/apps/brussel/RL8/zen4/software/hwloc/2.9.1-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/libevent/2.1.12-GCCcore-12.3.0/lib:/vscmnt/brussel_pixiu_apps/_apps_brussel/RL8/zen4/software/GCCcore/12.3.0/bin/../lib/gcc/x86_64-pc-linux-gnu/12.3.0:/vscmnt/brussel_pixiu_apps/_apps_brussel/RL8/zen4/software/GCCcore/12.3.0/bin/../lib/gcc:/apps/brussel/RL8/zen4/software/zstd/1.5.5-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/lz4/1.9.4-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/HDF5/1.14.0-gompi-2023a/lib/../lib64:/apps/brussel/RL8/zen4/software/Szip/2.1.1-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/cURL/8.0.1-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/ncurses/6.4-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/FFTW/3.3.10-GCC-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/OpenBLAS/0.3.23-GCC-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/UCC/1.2.0-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/PMIx/4.2.4-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/UCX/1.14.1-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/OpenSSL/1.1/lib/../lib64:/apps/brussel/RL8/zen4/software/libpciaccess/0.17-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/libxml2/2.11.4-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/XZ/5.4.2-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/numactl/2.0.16-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/binutils/2.40-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/zlib/1.2.13-GCCcore-12.3.0/lib/../lib64:/apps/brussel/RL8/zen4/software/zstd/1.5.5-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/lz4/1.9.4-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/HDF5/1.14.0-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/Szip/2.1.1-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/cURL/8.0.1-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/ncurses/6.4-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/FFTW/3.3.10-GCC-12.3.0/lib:/apps/brussel/RL8/zen4/software/OpenBLAS/0.3.23-GCC-12.3.0/lib:/apps/brussel/RL8/zen4/software/UCC/1.2.0-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/PMIx/4.2.4-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/UCX/1.14.1-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/OpenSSL/1.1/lib:/apps/brussel/RL8/zen4/software/libpciaccess/0.17-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/libxml2/2.11.4-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/XZ/5.4.2-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/numactl/2.0.16-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/binutils/2.40-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/zlib/1.2.13-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/libarchive/3.6.2-GCCcore-12.3.0/lib:/user/brussel/101/vsc10122/easybuild/install/zen4/software/netCDF-C++4/4.3.1-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/netCDF-Fortran/4.6.1-gompi-2023a/lib64:/apps/brussel/RL8/zen4/software/netCDF/4.9.2-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/FFTW.MPI/3.3.10-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib:/apps/brussel/RL8/zen4/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib:/apps/brussel/RL8/zen4/software/bzip2/1.0.8-GCCcore-12.3.0/lib:/vscmnt/brussel_pixiu_apps/_apps_brussel/RL8/zen4/software/GCCcore/12.3.0/bin/../lib/gcc/x86_64-pc-linux-gnu/12.3.0/../../../../lib64/] | |
0x000000000000000c (INIT) 0x6000 | |
0x000000000000000d (FINI) 0xe500 | |
0x0000000000000019 (INIT_ARRAY) 0x14ce0 | |
0x000000000000001b (INIT_ARRAYSZ) 40 (bytes) | |
0x000000000000001a (FINI_ARRAY) 0x14d08 | |
0x000000000000001c (FINI_ARRAYSZ) 8 (bytes) | |
0x0000000000000004 (HASH) 0x200 | |
0x000000006ffffef5 (GNU_HASH) 0x898 | |
0x0000000000000005 (STRTAB) 0x24e0 | |
0x0000000000000006 (SYMTAB) 0xff8 | |
0x000000000000000a (STRSZ) 8016 (bytes) | |
0x000000000000000b (SYMENT) 24 (bytes) | |
0x0000000000000003 (PLTGOT) 0x14fe8 | |
0x0000000000000002 (PLTRELSZ) 3504 (bytes) | |
0x0000000000000014 (PLTREL) RELA | |
0x0000000000000017 (JMPREL) 0x47d8 | |
0x0000000000000007 (RELA) 0x46a0 | |
0x0000000000000008 (RELASZ) 312 (bytes) | |
0x0000000000000009 (RELAENT) 24 (bytes) | |
0x000000006ffffffe (VERNEED) 0x45f0 | |
0x000000006fffffff (VERNEEDNUM) 4 | |
0x000000006ffffff0 (VERSYM) 0x4430 | |
0x000000006ffffff9 (RELACOUNT) 7 | |
0x0000000000000000 (NULL) 0x0 | |
== 2024-06-17 18:34:03,167 run.py:504 INFO Shell command completed successfully (see output above): readelf -d /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmftrace_preload.so | |
== 2024-06-17 18:34:03,167 environment.py:129 INFO Restoring environment variable LD_LIBRARY_PATH (value: /user/brussel/101/vsc10122/easybuild/install/zen4/software/netCDF-C++4/4.3.1-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/netCDF-Fortran/4.6.1-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/netCDF/4.9.2-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/zstd/1.5.5-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/lz4/1.9.4-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/HDF5/1.14.0-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/Szip/2.1.1-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/libarchive/3.6.2-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/cURL/8.0.1-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/bzip2/1.0.8-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/ncurses/6.4-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/ScaLAPACK/2.2.0-gompi-2023a-fb/lib:/apps/brussel/RL8/zen4/software/FFTW.MPI/3.3.10-gompi-2023a/lib:/apps/brussel/RL8/zen4/software/FFTW/3.3.10-GCC-12.3.0/lib:/apps/brussel/RL8/zen4/software/FlexiBLAS/3.3.1-GCC-12.3.0/lib:/apps/brussel/RL8/zen4/software/OpenBLAS/0.3.23-GCC-12.3.0/lib:/apps/brussel/RL8/zen4/software/OpenMPI/4.1.5-GCC-12.3.0/lib:/apps/brussel/RL8/zen4/software/UCC/1.2.0-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/PMIx/4.2.4-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/UCX/1.14.1-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/libevent/2.1.12-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/OpenSSL/1.1/lib:/apps/brussel/RL8/zen4/software/hwloc/2.9.1-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/libpciaccess/0.17-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/libxml2/2.11.4-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/XZ/5.4.2-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/numactl/2.0.16-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/binutils/2.40-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/zlib/1.2.13-GCCcore-12.3.0/lib:/apps/brussel/RL8/zen4/software/GCCcore/12.3.0/lib64) | |
== 2024-06-17 18:34:03,168 easyblock.py:3685 WARNING RPATH sanity check failed! | |
== 2024-06-17 18:34:03,174 build_log.py:176 ERROR EasyBuild encountered an error (at easybuild/easybuild-framework/easybuild/base/exceptions.py:126 in __init__): Sanity check failed: Library libhdf5_hl.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/bin/ESMF_Regrid | |
Library libhdf5.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/bin/ESMF_Regrid | |
Library libbz2.so.1.0 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/bin/ESMF_Regrid | |
Library libhdf5_hl.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/bin/ESMF_PrintInfoC | |
Library libhdf5.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/bin/ESMF_PrintInfoC | |
Library libbz2.so.1.0 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/bin/ESMF_PrintInfoC | |
Library libhdf5_hl.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/bin/ESMF_Scrip2Unstruct | |
Library libhdf5.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/bin/ESMF_Scrip2Unstruct | |
Library libbz2.so.1.0 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/bin/ESMF_Scrip2Unstruct | |
Library libhdf5_hl.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/bin/ESMF_RegridWeightGen | |
Library libhdf5.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/bin/ESMF_RegridWeightGen | |
Library libbz2.so.1.0 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/bin/ESMF_RegridWeightGen | |
Library libhdf5_hl.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/bin/ESMF_WebServController | |
Library libhdf5.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/bin/ESMF_WebServController | |
Library libbz2.so.1.0 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/bin/ESMF_WebServController | |
Library libhdf5_hl.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/bin/ESMF_PrintInfo | |
Library libhdf5.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/bin/ESMF_PrintInfo | |
Library libbz2.so.1.0 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/bin/ESMF_PrintInfo | |
Library libhdf5_hl.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib/libesmf_fullylinked.so | |
Library libhdf5.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib/libesmf_fullylinked.so | |
Library libbz2.so.1.0 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib/libesmf_fullylinked.so | |
Library libhdf5_hl.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib/libesmftrace_preload.so | |
Library libhdf5.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib/libesmftrace_preload.so | |
Library libbz2.so.1.0 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib/libesmftrace_preload.so | |
Library libhdf5_hl.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf_fullylinked.so | |
Library libhdf5.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf_fullylinked.so | |
Library libbz2.so.1.0 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmf_fullylinked.so | |
Library libhdf5_hl.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmftrace_preload.so | |
Library libhdf5.so.310 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmftrace_preload.so | |
Library libbz2.so.1.0 not found for /user/brussel/101/vsc10122/easybuild/install/zen4/software/ESMF/8.6.0-foss-2023a/lib64/libesmftrace_preload.so (at easybuild/easybuild-framework/easybuild/framework/easyblock.py:3692 in _sanity_check_step) | |
== 2024-06-17 18:34:03,174 build_log.py:272 INFO ... (took 22 secs) | |
== 2024-06-17 18:34:03,174 filetools.py:2004 INFO Removing lock /user/brussel/101/vsc10122/easybuild/install/zen4/software/.locks/_user_brussel_101_vsc10122_easybuild_install_zen4_software_ESMF_8.6.0-foss-2023a.lock... | |
== 2024-06-17 18:34:03,176 filetools.py:384 INFO Path /user/brussel/101/vsc10122/easybuild/install/zen4/software/.locks/_user_brussel_101_vsc10122_easybuild_install_zen4_software_ESMF_8.6.0-foss-2023a.lock successfully removed. | |
== 2024-06-17 18:34:03,176 filetools.py:2008 INFO Lock removed: /user/brussel/101/vsc10122/easybuild/install/zen4/software/.locks/_user_brussel_101_vsc10122_easybuild_install_zen4_software_ESMF_8.6.0-foss-2023a.lock | |
== 2024-06-17 18:34:03,176 easyblock.py:329 INFO Closing log for application name ESMF version 8.6.0 |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment