(partial) EasyBuild log for failed build of /user/brussel/101/vsc10122/.local/easybuild/tmp/eb-fYUOY4/files_pr10270/b/Bonito/Bonito-0.1.0-foss-2019b-Python-3.7.4.eb (PR #10270)

Bonito-0.1.0-foss-2019b-Python-3.7.4_partial.log

== 2020-04-09 15:41:25,856 easyblock.py:280 INFO This is EasyBuild 4.2.0.dev0-r9064fbf53ae5473748485e499116457bec355e38 (framework: 4.2.0.dev0-r9064fbf53ae5473748485e499116457bec355e38, easyblocks: 4.1.2.dev0-r3ade7ae1de67d0d41de41467407dbf7b903855c5) on host node376.hydra.os.
== 2020-04-09 15:41:25,856 easyblock.py:286 INFO This is easyblock PythonBundle from module easybuild.easyblocks.generic.pythonbundle (/user/brussel/101/vsc10122/src/easybuild-easyblocks/easybuild/easyblocks/generic/pythonbundle.pyo)
== 2020-04-09 15:41:25,857 easyblock.py:843 INFO Build dir set to /user/brussel/101/vsc10122/.local/easybuild/build/Bonito/0.1.0/foss-2019b-Python-3.7.4
== 2020-04-09 15:41:25,857 easyblock.py:903 INFO Software install dir set to /user/brussel/101/vsc10122/.local/easybuild/software/Bonito/0.1.0-foss-2019b-Python-3.7.4
== 2020-04-09 15:41:25,857 easyblock.py:908 INFO Module install dir set to /user/brussel/101/vsc10122/.local/easybuild/modules/all
== 2020-04-09 15:41:25,857 easyblock.py:265 INFO Init completed for application name Bonito version 0.1.0
== 2020-04-09 15:41:25,858 pythonbundle.py:73 INFO Detection of downloaded extension dependencies is enabled
== 2020-04-09 15:41:25,858 pythonbundle.py:77 INFO exts_default_options: {'use_pip_extras': None, 'unpack_sources': True, 'install_target': 'install', 'use_pip_for_deps': False, 'sanity_pip_check': True, 'use_pip_editable': False, 'pip_ignore_installed': True, 'req_py_minver': None, 'buildcmd': 'build', 'use_easy_install': False, 'download_dep_fail': True, 'use_setup_py_develop': False, 'source_urls': ['https://pypi.python.org/packages/source/B/Bonito'], 'use_pip': True, 'runtest': True, 'req_py_majver': None, 'zipped_egg': False, 'options': {}, 'check_ldshared': None}
== 2020-04-09 15:41:25,858 easyblock.py:3117 INFO Obtained application instance of for Bonito (easyblock: PythonBundle)
== 2020-04-09 15:41:25,859 one.py:150 INFO Skipping reformatting value for parameter 'toolchain'
== 2020-04-09 15:41:25,860 filetools.py:1305 INFO Creating directory /user/brussel/101/vsc10122/.local/easybuild/tmp/eb-fYUOY4/reprod_20200409154125_20968 (parents: True, set_gid: False, sticky: False)
== 2020-04-09 15:41:25,861 easyblock.py:3294 INFO Dumped easyconfig instance to /user/brussel/101/vsc10122/.local/easybuild/tmp/eb-fYUOY4/reprod_20200409154125_20968/Bonito-0.1.0-foss-2019b-Python-3.7.4.eb
== 2020-04-09 15:41:25,861 filetools.py:1305 INFO Creating directory /user/brussel/101/vsc10122/.local/easybuild/tmp/eb-fYUOY4/reprod_20200409154125_20968/easyblocks (parents: True, set_gid: False, sticky: False)
== 2020-04-09 15:41:25,880 filetools.py:1782 INFO /user/brussel/101/vsc10122/src/easybuild-easyblocks/easybuild/easyblocks/generic/pythonbundle.py copied to /user/brussel/101/vsc10122/.local/easybuild/tmp/eb-fYUOY4/reprod_20200409154125_20968/easyblocks/pythonbundle.py
== 2020-04-09 15:41:25,880 easyblock.py:3309 INFO Dumped easyblock pythonbundle.py required for reproduction to /user/brussel/101/vsc10122/.local/easybuild/tmp/eb-fYUOY4/reprod_20200409154125_20968/easyblocks
== 2020-04-09 15:41:25,902 filetools.py:1782 INFO /user/brussel/101/vsc10122/src/easybuild-easyblocks/easybuild/easyblocks/generic/bundle.py copied to /user/brussel/101/vsc10122/.local/easybuild/tmp/eb-fYUOY4/reprod_20200409154125_20968/easyblocks/bundle.py
== 2020-04-09 15:41:25,903 easyblock.py:3309 INFO Dumped easyblock bundle.py required for reproduction to /user/brussel/101/vsc10122/.local/easybuild/tmp/eb-fYUOY4/reprod_20200409154125_20968/easyblocks
== 2020-04-09 15:41:25,903 easyblock.py:1615 INFO Number of iterations to perform for central part of installation procedure: 1
== 2020-04-09 15:41:25,903 build_log.py:265 INFO building and installing Bonito/0.1.0-foss-2019b-Python-3.7.4...
== 2020-04-09 15:41:25,903 build_log.py:265 INFO fetching files...
== 2020-04-09 15:41:25,904 easyblock.py:2895 INFO Starting fetch step
== 2020-04-09 15:41:25,904 easyblock.py:2901 INFO Running method fetch_step part of step fetch
== 2020-04-09 15:41:25,905 easyblock.py:1724 WARNING Easyconfig does not specify an EasyBuild-version (key 'easybuild_version')! Assuming the latest version
== 2020-04-09 15:41:25,905 easyblock.py:1750 INFO no sources provided
== 2020-04-09 15:41:25,905 easyblock.py:1765 INFO no patches provided
== 2020-04-09 15:41:25,907 tools.py:266 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /user/brussel/101/vsc10122/src/easybuild-framework/eb
== 2020-04-09 15:41:25,907 tools.py:282 INFO Not considering /user/brussel/101/vsc10122/src (no easybuild/easyconfigs subdir found)
== 2020-04-09 15:41:25,907 tools.py:290 INFO Also considering installation prefix /theia/home/brussel/101/vsc10122/src (via resolved path to 'eb')...
== 2020-04-09 15:41:25,914 easyblock.py:671 INFO Found file toml-0.10.0.tar.gz at /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/toml-0.10.0.tar.gz
== 2020-04-09 15:41:25,915 easyblock.py:529 INFO md5 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/toml-0.10.0.tar.gz: 63fffbe2d632865ec29cd69bfdf36682
== 2020-04-09 15:41:25,916 easyblock.py:529 INFO sha256 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/toml-0.10.0.tar.gz: 229f81c57791a41d65e399fc06bf0848bab550a9dfd5ed66df18ce5f05e73d5c
== 2020-04-09 15:41:25,916 easyblock.py:535 INFO Checksum for extension source toml-0.10.0.tar.gz verified
== 2020-04-09 15:41:25,916 easyblock.py:457 INFO Fetched extension patches: []
== 2020-04-09 15:41:25,917 tools.py:266 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /user/brussel/101/vsc10122/src/easybuild-framework/eb
== 2020-04-09 15:41:25,917 tools.py:282 INFO Not considering /user/brussel/101/vsc10122/src (no easybuild/easyconfigs subdir found)
== 2020-04-09 15:41:25,918 tools.py:290 INFO Also considering installation prefix /theia/home/brussel/101/vsc10122/src (via resolved path to 'eb')...
== 2020-04-09 15:41:25,920 easyblock.py:671 INFO Found file tqdm-4.31.1.tar.gz at /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/tqdm-4.31.1.tar.gz
== 2020-04-09 15:41:25,926 easyblock.py:529 INFO md5 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/tqdm-4.31.1.tar.gz: 807e8c13e16e3660ac88e05d711daeb0
== 2020-04-09 15:41:25,927 easyblock.py:529 INFO sha256 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/tqdm-4.31.1.tar.gz: e22977e3ebe961f72362f6ddfb9197cc531c9737aaf5f607ef09740c849ecd05
== 2020-04-09 15:41:25,928 easyblock.py:535 INFO Checksum for extension source tqdm-4.31.1.tar.gz verified
== 2020-04-09 15:41:25,928 easyblock.py:457 INFO Fetched extension patches: []
== 2020-04-09 15:41:25,929 tools.py:266 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /user/brussel/101/vsc10122/src/easybuild-framework/eb
== 2020-04-09 15:41:25,929 tools.py:282 INFO Not considering /user/brussel/101/vsc10122/src (no easybuild/easyconfigs subdir found)
== 2020-04-09 15:41:25,929 tools.py:290 INFO Also considering installation prefix /theia/home/brussel/101/vsc10122/src (via resolved path to 'eb')...
== 2020-04-09 15:41:25,931 easyblock.py:671 INFO Found file python-editor-1.0.4.tar.gz at /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/python-editor-1.0.4.tar.gz
== 2020-04-09 15:41:25,932 easyblock.py:529 INFO md5 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/python-editor-1.0.4.tar.gz: 0e52648a4a6e7c89e3be44e9456530b4
== 2020-04-09 15:41:25,932 easyblock.py:529 INFO sha256 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/python-editor-1.0.4.tar.gz: 51fda6bcc5ddbbb7063b2af7509e43bd84bfc32a4ff71349ec7847713882327b
== 2020-04-09 15:41:25,932 easyblock.py:535 INFO Checksum for extension source python-editor-1.0.4.tar.gz verified
== 2020-04-09 15:41:25,933 easyblock.py:457 INFO Fetched extension patches: []
== 2020-04-09 15:41:25,933 tools.py:266 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /user/brussel/101/vsc10122/src/easybuild-framework/eb
== 2020-04-09 15:41:25,933 tools.py:282 INFO Not considering /user/brussel/101/vsc10122/src (no easybuild/easyconfigs subdir found)
== 2020-04-09 15:41:25,933 tools.py:290 INFO Also considering installation prefix /theia/home/brussel/101/vsc10122/src (via resolved path to 'eb')...
== 2020-04-09 15:41:25,936 easyblock.py:671 INFO Found file alembic-1.4.2.tar.gz at /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/alembic-1.4.2.tar.gz
== 2020-04-09 15:41:25,972 easyblock.py:529 INFO md5 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/alembic-1.4.2.tar.gz: 1d67bdbd3abd33f0319afcd29bc59686
== 2020-04-09 15:41:25,979 easyblock.py:529 INFO sha256 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/alembic-1.4.2.tar.gz: 035ab00497217628bf5d0be82d664d8713ab13d37b630084da8e1f98facf4dbf
== 2020-04-09 15:41:25,983 easyblock.py:535 INFO Checksum for extension source alembic-1.4.2.tar.gz verified
== 2020-04-09 15:41:25,983 easyblock.py:457 INFO Fetched extension patches: []
== 2020-04-09 15:41:25,983 tools.py:266 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /user/brussel/101/vsc10122/src/easybuild-framework/eb
== 2020-04-09 15:41:25,983 tools.py:282 INFO Not considering /user/brussel/101/vsc10122/src (no easybuild/easyconfigs subdir found)
== 2020-04-09 15:41:25,984 tools.py:290 INFO Also considering installation prefix /theia/home/brussel/101/vsc10122/src (via resolved path to 'eb')...
== 2020-04-09 15:41:25,985 easyblock.py:671 INFO Found file cmd2-1.0.1.tar.gz at /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/cmd2-1.0.1.tar.gz
== 2020-04-09 15:41:26,005 easyblock.py:529 INFO md5 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/cmd2-1.0.1.tar.gz: 755ce284730acb23356ff6b7dd18560c
== 2020-04-09 15:41:26,007 easyblock.py:529 INFO sha256 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/cmd2-1.0.1.tar.gz: d339166d8f65d342f37df01b7fb4820f9618209937d12e8f1af6245f12605c3a
== 2020-04-09 15:41:26,009 easyblock.py:535 INFO Checksum for extension source cmd2-1.0.1.tar.gz verified
== 2020-04-09 15:41:26,010 easyblock.py:457 INFO Fetched extension patches: []
== 2020-04-09 15:41:26,010 tools.py:266 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /user/brussel/101/vsc10122/src/easybuild-framework/eb
== 2020-04-09 15:41:26,010 tools.py:282 INFO Not considering /user/brussel/101/vsc10122/src (no easybuild/easyconfigs subdir found)
== 2020-04-09 15:41:26,010 tools.py:290 INFO Also considering installation prefix /theia/home/brussel/101/vsc10122/src (via resolved path to 'eb')...
== 2020-04-09 15:41:26,012 easyblock.py:671 INFO Found file prettytable-0.7.2.tar.gz at /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/prettytable-0.7.2.tar.gz
== 2020-04-09 15:41:26,013 easyblock.py:529 INFO md5 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/prettytable-0.7.2.tar.gz: a6b80afeef286ce66733d54a0296b13b
== 2020-04-09 15:41:26,013 easyblock.py:529 INFO sha256 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/prettytable-0.7.2.tar.gz: 2d5460dc9db74a32bcc8f9f67de68b2c4f4d2f01fa3bd518764c69156d9cacd9
== 2020-04-09 15:41:26,013 easyblock.py:535 INFO Checksum for extension source prettytable-0.7.2.tar.gz verified
== 2020-04-09 15:41:26,013 easyblock.py:457 INFO Fetched extension patches: []
== 2020-04-09 15:41:26,014 tools.py:266 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /user/brussel/101/vsc10122/src/easybuild-framework/eb
== 2020-04-09 15:41:26,014 tools.py:282 INFO Not considering /user/brussel/101/vsc10122/src (no easybuild/easyconfigs subdir found)
== 2020-04-09 15:41:26,014 tools.py:290 INFO Also considering installation prefix /theia/home/brussel/101/vsc10122/src (via resolved path to 'eb')...
== 2020-04-09 15:41:26,016 easyblock.py:671 INFO Found file cliff-3.1.0.tar.gz at /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/cliff-3.1.0.tar.gz
== 2020-04-09 15:41:26,032 easyblock.py:529 INFO md5 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/cliff-3.1.0.tar.gz: d4bd8cccf92a8ebbf45808807c5e2928
== 2020-04-09 15:41:26,032 easyblock.py:529 INFO sha256 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/cliff-3.1.0.tar.gz: 529b0ee0d2d38c7cbbababbbe3472b43b667a5c36025ef1b6cd00851c4313849
== 2020-04-09 15:41:26,033 easyblock.py:535 INFO Checksum for extension source cliff-3.1.0.tar.gz verified
== 2020-04-09 15:41:26,033 easyblock.py:457 INFO Fetched extension patches: []
== 2020-04-09 15:41:26,033 tools.py:266 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /user/brussel/101/vsc10122/src/easybuild-framework/eb
== 2020-04-09 15:41:26,033 tools.py:282 INFO Not considering /user/brussel/101/vsc10122/src (no easybuild/easyconfigs subdir found)
== 2020-04-09 15:41:26,034 tools.py:290 INFO Also considering installation prefix /theia/home/brussel/101/vsc10122/src (via resolved path to 'eb')...
== 2020-04-09 15:41:26,035 easyblock.py:671 INFO Found file colorlog-4.1.0.tar.gz at /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/colorlog-4.1.0.tar.gz
== 2020-04-09 15:41:26,036 easyblock.py:529 INFO md5 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/colorlog-4.1.0.tar.gz: 25f79b76421132e2a9e08da15e4e0a73
== 2020-04-09 15:41:26,037 easyblock.py:529 INFO sha256 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/colorlog-4.1.0.tar.gz: 30aaef5ab2a1873dec5da38fd6ba568fa761c9fa10b40241027fa3edea47f3d2
== 2020-04-09 15:41:26,037 easyblock.py:535 INFO Checksum for extension source colorlog-4.1.0.tar.gz verified
== 2020-04-09 15:41:26,037 easyblock.py:457 INFO Fetched extension patches: []
== 2020-04-09 15:41:26,038 tools.py:266 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /user/brussel/101/vsc10122/src/easybuild-framework/eb
== 2020-04-09 15:41:26,038 tools.py:282 INFO Not considering /user/brussel/101/vsc10122/src (no easybuild/easyconfigs subdir found)
== 2020-04-09 15:41:26,038 tools.py:290 INFO Also considering installation prefix /theia/home/brussel/101/vsc10122/src (via resolved path to 'eb')...
== 2020-04-09 15:41:26,040 easyblock.py:671 INFO Found file SQLAlchemy-1.3.15.tar.gz at /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/SQLAlchemy-1.3.15.tar.gz
== 2020-04-09 15:41:26,108 easyblock.py:529 INFO md5 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/SQLAlchemy-1.3.15.tar.gz: c869817feddc7b0d3ae9ed23cf86997d
== 2020-04-09 15:41:26,125 easyblock.py:529 INFO sha256 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/SQLAlchemy-1.3.15.tar.gz: c4cca4aed606297afbe90d4306b49ad3a4cd36feb3f87e4bfd655c57fd9ef445
== 2020-04-09 15:41:26,141 easyblock.py:535 INFO Checksum for extension source SQLAlchemy-1.3.15.tar.gz verified
== 2020-04-09 15:41:26,142 easyblock.py:457 INFO Fetched extension patches: []
== 2020-04-09 15:41:26,142 tools.py:266 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /user/brussel/101/vsc10122/src/easybuild-framework/eb
== 2020-04-09 15:41:26,142 tools.py:282 INFO Not considering /user/brussel/101/vsc10122/src (no easybuild/easyconfigs subdir found)
== 2020-04-09 15:41:26,142 tools.py:290 INFO Also considering installation prefix /theia/home/brussel/101/vsc10122/src (via resolved path to 'eb')...
== 2020-04-09 15:41:26,144 easyblock.py:671 INFO Found file optuna-1.1.0.tar.gz at /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/optuna-1.1.0.tar.gz
== 2020-04-09 15:41:26,146 easyblock.py:529 INFO md5 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/optuna-1.1.0.tar.gz: ec2d5df0637585eb77a7a7c6e95211fd
== 2020-04-09 15:41:26,146 easyblock.py:529 INFO sha256 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/optuna-1.1.0.tar.gz: 322df88051b60f3f42c89285a9434f01b650a4b0b3bcd7b46fbc328424df4eda
== 2020-04-09 15:41:26,147 easyblock.py:535 INFO Checksum for extension source optuna-1.1.0.tar.gz verified
== 2020-04-09 15:41:26,147 easyblock.py:457 INFO Fetched extension patches: []
== 2020-04-09 15:41:26,147 tools.py:266 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /user/brussel/101/vsc10122/src/easybuild-framework/eb
== 2020-04-09 15:41:26,147 tools.py:282 INFO Not considering /user/brussel/101/vsc10122/src (no easybuild/easyconfigs subdir found)
== 2020-04-09 15:41:26,148 tools.py:290 INFO Also considering installation prefix /theia/home/brussel/101/vsc10122/src (via resolved path to 'eb')...
== 2020-04-09 15:41:26,149 easyblock.py:671 INFO Found file parasail-1.2.tar.gz at /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/parasail-1.2.tar.gz
== 2020-04-09 15:41:26,168 easyblock.py:529 INFO md5 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/parasail-1.2.tar.gz: ed247873676077fa5d2a7ea8a4d19831
== 2020-04-09 15:41:26,168 easyblock.py:529 INFO sha256 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/parasail-1.2.tar.gz: 6ceef978e7d06293c38c9824f76557f3d7e137cb05487be31bf89286f7a8201e
== 2020-04-09 15:41:26,169 easyblock.py:535 INFO Checksum for extension source parasail-1.2.tar.gz verified
== 2020-04-09 15:41:26,169 easyblock.py:457 INFO Fetched extension patches: []
== 2020-04-09 15:41:26,169 tools.py:266 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /user/brussel/101/vsc10122/src/easybuild-framework/eb
== 2020-04-09 15:41:26,170 tools.py:282 INFO Not considering /user/brussel/101/vsc10122/src (no easybuild/easyconfigs subdir found)
== 2020-04-09 15:41:26,170 tools.py:290 INFO Also considering installation prefix /theia/home/brussel/101/vsc10122/src (via resolved path to 'eb')...
== 2020-04-09 15:41:26,172 easyblock.py:671 INFO Found file colorama-0.4.3.tar.gz at /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/colorama-0.4.3.tar.gz
== 2020-04-09 15:41:26,173 easyblock.py:529 INFO md5 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/colorama-0.4.3.tar.gz: 02daee502863d24112a8c05a5d69a612
== 2020-04-09 15:41:26,173 easyblock.py:529 INFO sha256 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/colorama-0.4.3.tar.gz: e96da0d330793e2cb9485e9ddfd918d456036c7149416295932478192f4436a1
== 2020-04-09 15:41:26,174 easyblock.py:535 INFO Checksum for extension source colorama-0.4.3.tar.gz verified
== 2020-04-09 15:41:26,174 easyblock.py:457 INFO Fetched extension patches: []
== 2020-04-09 15:41:26,174 tools.py:266 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /user/brussel/101/vsc10122/src/easybuild-framework/eb
== 2020-04-09 15:41:26,175 tools.py:282 INFO Not considering /user/brussel/101/vsc10122/src (no easybuild/easyconfigs subdir found)
== 2020-04-09 15:41:26,175 tools.py:290 INFO Also considering installation prefix /theia/home/brussel/101/vsc10122/src (via resolved path to 'eb')...
== 2020-04-09 15:41:26,177 easyblock.py:671 INFO Found file pyperclip-1.7.0.tar.gz at /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/pyperclip-1.7.0.tar.gz
== 2020-04-09 15:41:26,178 easyblock.py:529 INFO md5 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/pyperclip-1.7.0.tar.gz: 6bbb8598579cc3ee50554b4c59d0cfae
== 2020-04-09 15:41:26,179 easyblock.py:529 INFO sha256 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/pyperclip-1.7.0.tar.gz: 979325468ccf682104d5dcaf753f869868100631301d3e72f47babdea5700d1c
== 2020-04-09 15:41:26,179 easyblock.py:535 INFO Checksum for extension source pyperclip-1.7.0.tar.gz verified
== 2020-04-09 15:41:26,179 easyblock.py:457 INFO Fetched extension patches: []
== 2020-04-09 15:41:26,180 tools.py:266 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /user/brussel/101/vsc10122/src/easybuild-framework/eb
== 2020-04-09 15:41:26,180 tools.py:282 INFO Not considering /user/brussel/101/vsc10122/src (no easybuild/easyconfigs subdir found)
== 2020-04-09 15:41:26,180 tools.py:290 INFO Also considering installation prefix /theia/home/brussel/101/vsc10122/src (via resolved path to 'eb')...
== 2020-04-09 15:41:26,182 easyblock.py:671 INFO Found file stevedore-1.32.0.tar.gz at /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/stevedore-1.32.0.tar.gz
== 2020-04-09 15:41:26,200 easyblock.py:529 INFO md5 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/stevedore-1.32.0.tar.gz: f854d6ed0f6fcaf93a32c755d706ce19
== 2020-04-09 15:41:26,203 easyblock.py:529 INFO sha256 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/stevedore-1.32.0.tar.gz: 18afaf1d623af5950cc0f7e75e70f917784c73b652a34a12d90b309451b5500b
== 2020-04-09 15:41:26,206 easyblock.py:535 INFO Checksum for extension source stevedore-1.32.0.tar.gz verified
== 2020-04-09 15:41:26,206 easyblock.py:457 INFO Fetched extension patches: []
== 2020-04-09 15:41:26,207 tools.py:266 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /user/brussel/101/vsc10122/src/easybuild-framework/eb
== 2020-04-09 15:41:26,207 tools.py:282 INFO Not considering /user/brussel/101/vsc10122/src (no easybuild/easyconfigs subdir found)
== 2020-04-09 15:41:26,207 tools.py:290 INFO Also considering installation prefix /theia/home/brussel/101/vsc10122/src (via resolved path to 'eb')...
== 2020-04-09 15:41:26,210 easyblock.py:671 INFO Found file progressbar33-2.4.tar.gz at /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/progressbar33-2.4.tar.gz
== 2020-04-09 15:41:26,211 easyblock.py:529 INFO md5 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/progressbar33-2.4.tar.gz: 94c114ea62aaae93489848f5bdb0bbe7
== 2020-04-09 15:41:26,211 easyblock.py:529 INFO sha256 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/progressbar33-2.4.tar.gz: 51fe0d9b3b4023db2f983eeccdfc8c9846b84db8443b9bee002c7f58f4376eff
== 2020-04-09 15:41:26,211 easyblock.py:535 INFO Checksum for extension source progressbar33-2.4.tar.gz verified
== 2020-04-09 15:41:26,211 easyblock.py:457 INFO Fetched extension patches: []
== 2020-04-09 15:41:26,212 tools.py:266 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /user/brussel/101/vsc10122/src/easybuild-framework/eb
== 2020-04-09 15:41:26,212 tools.py:282 INFO Not considering /user/brussel/101/vsc10122/src (no easybuild/easyconfigs subdir found)
== 2020-04-09 15:41:26,212 tools.py:290 INFO Also considering installation prefix /theia/home/brussel/101/vsc10122/src (via resolved path to 'eb')...
== 2020-04-09 15:41:26,213 easyblock.py:671 INFO Found file ont-fast5-api-3.0.1.tar.gz at /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/ont-fast5-api-3.0.1.tar.gz
== 2020-04-09 15:41:26,252 easyblock.py:529 INFO md5 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/ont-fast5-api-3.0.1.tar.gz: 1d7528ad4b66b6cd45d558b7a95397ac
== 2020-04-09 15:41:26,261 easyblock.py:529 INFO sha256 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/ont-fast5-api-3.0.1.tar.gz: e5e82a54b5628f19597710e50cb0117fb6e78fd41d345b424f58d2613fbadaf2
== 2020-04-09 15:41:26,267 easyblock.py:535 INFO Checksum for extension source ont-fast5-api-3.0.1.tar.gz verified
== 2020-04-09 15:41:26,267 easyblock.py:457 INFO Fetched extension patches: []
== 2020-04-09 15:41:26,267 tools.py:266 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /user/brussel/101/vsc10122/src/easybuild-framework/eb
== 2020-04-09 15:41:26,267 tools.py:282 INFO Not considering /user/brussel/101/vsc10122/src (no easybuild/easyconfigs subdir found)
== 2020-04-09 15:41:26,268 tools.py:290 INFO Also considering installation prefix /theia/home/brussel/101/vsc10122/src (via resolved path to 'eb')...
== 2020-04-09 15:41:26,269 easyblock.py:671 INFO Found file fast_ctc_decode-0.2.3-cp37-cp37m-manylinux1_x86_64.whl at /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/fast_ctc_decode-0.2.3-cp37-cp37m-manylinux1_x86_64.whl
== 2020-04-09 15:41:26,285 easyblock.py:529 INFO md5 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/fast_ctc_decode-0.2.3-cp37-cp37m-manylinux1_x86_64.whl: 36fee5a91b2c6fd48ba39a4d61552152
== 2020-04-09 15:41:26,286 easyblock.py:529 INFO sha256 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/fast_ctc_decode-0.2.3-cp37-cp37m-manylinux1_x86_64.whl: 20aa7a30ee6023ed0c20f583c7af2c27f49a812700e9cf9f21f540650f6e62cb
== 2020-04-09 15:41:26,287 easyblock.py:535 INFO Checksum for extension source fast_ctc_decode-0.2.3-cp37-cp37m-manylinux1_x86_64.whl verified
== 2020-04-09 15:41:26,287 easyblock.py:457 INFO Fetched extension patches: []
== 2020-04-09 15:41:26,288 tools.py:266 INFO Found location to 'eb' script via $EB_SCRIPT_PATH: /user/brussel/101/vsc10122/src/easybuild-framework/eb
== 2020-04-09 15:41:26,288 tools.py:282 INFO Not considering /user/brussel/101/vsc10122/src (no easybuild/easyconfigs subdir found)
== 2020-04-09 15:41:26,288 tools.py:290 INFO Also considering installation prefix /theia/home/brussel/101/vsc10122/src (via resolved path to 'eb')...
== 2020-04-09 15:41:26,290 easyblock.py:671 INFO Found file ont-bonito-0.1.0.tar.gz at /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/ont-bonito-0.1.0.tar.gz
== 2020-04-09 15:41:26,477 easyblock.py:529 INFO md5 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/ont-bonito-0.1.0.tar.gz: f1420ba56506ea43b2e373fbd37cb43a
== 2020-04-09 15:41:26,550 easyblock.py:529 INFO sha256 checksum for /user/brussel/101/vsc10122/.local/easybuild/sources/b/Bonito/extensions/ont-bonito-0.1.0.tar.gz: 0098ce0cb09f022b7df4534dc7ba7f09cf4b30e358778fbed4adb200966e453d
== 2020-04-09 15:41:26,624 easyblock.py:535 INFO Checksum for extension source ont-bonito-0.1.0.tar.gz verified
== 2020-04-09 15:41:26,624 easyblock.py:457 INFO Fetched extension patches: []
== 2020-04-09 15:41:26,624 easyblock.py:1810 INFO Checking dirs that need to be created: ['/user/brussel/101/vsc10122/.local/easybuild/software/Bonito/0.1.0-foss-2019b-Python-3.7.4', '/user/brussel/101/vsc10122/.local/easybuild/modules/all/Bonito', '/user/brussel/101/vsc10122/.local/easybuild/modules/bio/Bonito']
== 2020-04-09 15:41:26,627 build_log.py:265 INFO creating build dir, resetting environment...
== 2020-04-09 15:41:26,628 easyblock.py:2895 INFO Starting ready step
== 2020-04-09 15:41:26,628 easyblock.py:2901 INFO Running method check_readiness_step part of step ready
== 2020-04-09 15:41:26,628 easyblock.py:1634 INFO Setting parallelism: 4
== 2020-04-09 15:41:26,698 environment.py:97 INFO Environment variable LD_LIBRARY_PATH set to  (previous value: '')
== 2020-04-09 15:41:26,699 environment.py:97 INFO Environment variable LD_PRELOAD set to  (previous value: '')
== 2020-04-09 15:41:26,699 easyblock.py:1673 WARNING Loaded modules detected: ['EasyBuild-develop']
== 2020-04-09 15:41:26,700 easyblock.py:2901 INFO Running method make_builddir part of step ready
== 2020-04-09 15:41:26,703 easyblock.py:928 INFO Found old directory /user/brussel/101/vsc10122/.local/easybuild/build/Bonito/0.1.0/foss-2019b-Python-3.7.4
== 2020-04-09 15:41:26,712 filetools.py:1401 INFO Path /user/brussel/101/vsc10122/.local/easybuild/build/Bonito/0.1.0/foss-2019b-Python-3.7.4 successfully removed.
== 2020-04-09 15:41:26,712 easyblock.py:936 INFO Removed old directory /user/brussel/101/vsc10122/.local/easybuild/build/Bonito/0.1.0/foss-2019b-Python-3.7.4
== 2020-04-09 15:41:26,712 filetools.py:1305 INFO Creating directory /user/brussel/101/vsc10122/.local/easybuild/build/Bonito/0.1.0/foss-2019b-Python-3.7.4 (parents: True, set_gid: False, sticky: False)
== 2020-04-09 15:41:26,714 easyblock.py:2901 INFO Running method reset_env part of step ready
== 2020-04-09 15:41:26,715 easyblock.py:2901 INFO Running method handle_iterate_opts part of step ready
== 2020-04-09 15:41:26,715 build_log.py:265 INFO unpacking...
== 2020-04-09 15:41:26,716 easyblock.py:2895 INFO Starting source step
== 2020-04-09 15:41:26,716 easyblock.py:2901 INFO Running method checksum_step part of step source
== 2020-04-09 15:41:26,716 easyblock.py:2901 INFO Running method extract_step part of step source
== 2020-04-09 15:41:26,717 build_log.py:265 INFO patching...
== 2020-04-09 15:41:26,717 easyblock.py:2895 INFO Starting patch step
== 2020-04-09 15:41:26,718 easyblock.py:2901 INFO Running method patch_step part of step patch
== 2020-04-09 15:41:26,718 build_log.py:265 INFO preparing...
== 2020-04-09 15:41:26,718 easyblock.py:2895 INFO Starting prepare step
== 2020-04-09 15:41:26,719 easyblock.py:2901 INFO Running method prepare_step part of step prepare
== 2020-04-09 15:41:26,762 build_log.py:169 ERROR EasyBuild crashed with an error (at easybuild/base/exceptions.py:124 in __init__): Missing modules for dependencies (use --robot?): PyTorch/1.3.1-foss-2019b-Python-3.7.4 (at easybuild/tools/toolchain/toolchain.py:503 in _check_dependencies)
== 2020-04-09 15:41:26,763 easyblock.py:3147 WARNING build failed (first 300 chars): Missing modules for dependencies (use --robot?): PyTorch/1.3.1-foss-2019b-Python-3.7.4
== 2020-04-09 15:41:26,763 easyblock.py:295 INFO Closing log for application name Bonito version 0.1.0