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Use copy to backup files

rclone copy ikkem-hpc-fq:/public/home/fqgong666/pretrained-model/all-test/dataset-2nd/2nd_data office:/public/dynacat/2nd_data --check-first  --verbose --dry-run

FQA

400 error of minio

If you see the following error

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Summary

• Use rocky8 singularity container to build and run to work around legacy glibc issue.

Build

 singularity exec -B /public,/etc --nv /public/groups/ai4ec/libs/images/rocky8.sif /bin/bash -l build_lammps.sh

Run

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#!/bin/bash

trap 'echo ffmpegexit && pkill -P $$'  EXIT SIGINT SIGTERM SIGHUP

# Define the timeout duration in seconds for file change
TIMEOUT_IN_S=10
TOTAL_TIMEOUT_IN_S=7200

# Get the last argument as the output file
OUTPUT_FILE="${@: -1}"

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Background

• A windows XP guest machine exported from VMWare as OVF format

Tips

• Install cockpit and cockpick-machines: sudo apt install cockpit cockpit-machines
• Convert vmdk image to qcow2 with the following command: qemu-img convert -f vmdk -O qcow2 xp-wire-disk1.vmdk xp-wire-disk1.qcow2
• Create winxp virtual machine by importing existed disk, OS type should select unknown, don't start vm after import.
• Edit network interfaces, change model to e1000(PCI, legacy)
• Download e1000 driver iso from: https://archive.org/details/intel-pro1000-mt-desktop-82540em-winxp
• Add ISO as CD/ROM

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Docker

set proxy for docker build and docker run

You can add proxy configurations for the Docker client using a JSON configuration file, located in ~/.docker/config.json. Builds and containers use the configuration specified in this file.

{
 "proxies": {
   "default": {
     "httpProxy": "http://proxy.example.com:3128",
 "httpsProxy": "https://proxy.example.com:3129",

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2.2.8

CONDA_OVERRIDE_CUDA="11.8" conda create -p deepmd/2.2.8/gpu deepmd-kit=2.2.8=cuda118py310*  lammps horovod -c conda-forge 

To work around a known issue of conda-forge's tensorflow package, one has to run pip install nvidia-cuda-nvcc-cu11 in the conda environment.

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"""
Convert DIYP TV List to m3u format

Usage:
python dipy_to_m3u.py diyp.txt out.m3u

DIPY format example:
cctv|channel,#genre#
CCTV1,http://example.org
"""

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// ==UserScript==
// @name         Reddit Crawler
// @namespace    http://tampermonkey.net/
// @version      0.1
// @description  Crawl posts and comments on a specific reddit sub and export as jsonl
// @author       Bing
// @match        https://www.reddit.com/*
// @grant        GM_registerMenuCommand
// ==/UserScript==

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Build DeepMD-kit + LAMMPS in a conda envrionment

Steps

Create conda environment

conda create -p 2.2.5/gpu python==3.10.13  tensorflow=2.10.*=gpu*

Note:

• Install tensorflow with conda instead of pip will have less trouble (for example, conda will install the right cudnn for you)

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POC: use typescript as container of structured data for LLM

Prompt

The following is Typescript code that describe the data structure of reactions. The reactions to be exported are not implement yet.

/**
 * This is a typescript prompt file to export reactions data.
 */