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#!/bin/bash
#Heith Seewald 2012
#Feel free to extend/modify to meet your needs.
#Maya on Ubuntu v.1
#This is the base installer... I’ll add more features in later versions.
#if you have any issues, feel free email me at heiths@gmail.com
#### Lets run a few checks to make sure things work as expected.
#Make sure we’re running with root permissions.
if [ `whoami` != root ]; then
@lmmx
lmmx / Makefile
Last active August 29, 2015 14:16 — forked from ramnathv/Makefile
example.md: example.Rmd
./knit
example.ipynb: example.md
notedown example.md | sed 's/%%r/%%R/' > example.ipynb
@lmmx
lmmx / Trying_printing.pl
Last active November 16, 2015 17:23 — forked from TamaDP/Trying_printing.pl
Trying format for output
use strict;
use warnings;
my $n_missed_cleavages = 0;
my @proteins = qw(
DAAAAATTLTTTAMTTTTTTCKMMFRPPPPPGGGGGGGGGGGG
ALTAMCMNVWEITYHKGSDVNRRASFAQPPPQPPPPLLAIKPASDASD
DAAAAATTLTTTAMTTTTTTCK
);
@lmmx
lmmx / tomasetti-vogelstein-table-s1.tsv
Last active April 29, 2016 21:27 — forked from arq5x/table_s1.txt
Tomasetti & Vogelstein (2015) Science 'bad luck of cancer' paper supplementary table S1. Finalised via Yaniv Erlich & Aaron Quinlan's draft clean-ups of the PDF supplement
Cancer_type Lifetime_cancer_incidence Total_cells_tissue Total_Stem_Cells Stem_cell_divisions_per_year Stem_cell_divisions_per_lifetime LSCD
ALL 0.0041 3000000000000 135000000 12 960 129900000000
BCC 0.3 180000000000 5820000000 7.6 608 3550000000000
CLL 0.0052 3000000000000 135000000 12 960 129900000000
Colorectal 0.048 30000000000 200000000 73 5840 1168000000000
Colorectal_FAP 1 30000000000 200000000 73 5840 1168000000000
Colorectal_Lynch 0.5 30000000000 200000000 73 5840 1168000000000
Duodenum_adenocarcinoma 0.0003 680000000 4000000 24 1947 7796000000
Duodenum_adenocarcinoma_with_FAP 0.035 680000000 4000000 24 1947 7796000000
Esophageal_squamous_cell_carcinoma 0.001938 3240000000 846000 17.4 1390 1203000000
@lmmx
lmmx / unicode_to_latex.py
Created December 5, 2015 17:23 — forked from beniwohli/unicode_to_latex.py
Map to convert unicode characters to their respective LaTeX representation
# original XML at http://www.w3.org/Math/characters/unicode.xml
# XSL for conversion: https://gist.github.com/798546
unicode_to_latex = {
u"\u0020": "\\space ",
u"\u0023": "\\#",
u"\u0024": "\\textdollar ",
u"\u0025": "\\%",
u"\u0026": "\\&",