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lwaldron/gist:4137c0c4fe215590a35a874f3a0af04b

Last active December 21, 2017 01:31
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wideFormat() with experimentColDataCols
Raw
gistfile1.txt
library(SummarizedExperiment)
library(MultiAssayExperiment)
example("MultiAssayExperiment", echo=FALSE)
myMultiAssayExperiment[[1]] <- SummarizedExperiment(assays=exprs(myMultiAssayExperiment[[1]]), colData=pData(myMultiAssayExperiment[[1]]))
myMultiAssayExperiment[[2]] <- SummarizedExperiment(myMultiAssayExperiment[[2]], colData=DataFrame(slope53=1:5))
myMultiAssayExperiment[[3]] <- SummarizedExperiment(myMultiAssayExperiment[[3]])
colData(myMultiAssayExperiment)
colData(myMultiAssayExperiment[[1]])
colData(myMultiAssayExperiment[[2]])
wideFormat(myMultiAssayExperiment[1, 1:2, ], colDataCols="sex")
longFormat(myMultiAssayExperiment[1, 1:2, ], colDataCols="sex")
# wideFormat(myMultiAssayExperiment[1, 1:2, ], colDataCols="sex", experimentColDataCols="slope53") #??
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