No administrative privileges required.
Steps:
-
Download Cygwin setup application from https://cygwin.com
-
Run Cygwin setup file
- Select “Install For Just Me”
No administrative privileges required.
Steps:
Download Cygwin setup application from https://cygwin.com
Run Cygwin setup file
# using a data.frame for output results | |
# base time 26 seconds with 60k rows | |
# this block takes 27 seconds with 100k rows | |
# if (sum(df[i,])) | |
# df$ccc_flag[i] <- 1L | |
# this one line takes abotut 10 seconds with 60k rows | |
# df$ccc_flag[i] <- ccc_flag |
# install.packages('bigrquery') | |
library('bigrquery') | |
project <- "sandbox-nlp" # put your project ID here | |
sql <- "SELECT * | |
FROM `sandbox-nlp.MIMIC3_V1_4.ADMISSIONS` | |
LIMIT 100" | |
gbq_cursor <- bq_project_query(project, sql) | |
result <- bq_table_download(gbq_cursor) |
function FindProxyForURL(url, host) { | |
// the zotero service should only be local | |
if ( shExpMatch(url, "http://127.0.0.1:23119/*") ) { | |
return "DIRECT"; | |
} | |
// localhost and local stuff should go to through socks proxy | |
if (shExpMatch(host, "skylark.ucdenver.pvt") || | |
shExpMatch(host, "rainier.ucdenver.pvt") || |
## | |
# Customized Nginx configuration | |
## | |
server { | |
root /var/www/html; | |
index index.html index.htm index.nginx-debian.html; | |
server_name rstudio.learnclinicaldatascience.org; # managed by Certbot | |
access_log /var/log/nginx/rstudio.learnclinicaldatascience.org; |
Fast Healthcare Interoperability Resources (http://hl7.org/fhir) - FHIR – is a standards framework created by Health Level 7 (HL7). FHIR combines the features of HL7's previous health data interchange standards including HL7 v2 , HL7 v3 and CDA. FHIR improves on previous standards by using more modern web standards for data exchange, supports many programming languages, and promostes human readability.
Start by reading through this first: "FHIR Drills" https://fhir-drills.github.io/index.html
From linux command-line remove all existing R packages:
sudo apt-get update
sudo apt-get remove r-base r-base-dev r-base-core r-base-html r-cran-boot r-cran-class r-cran-cluster r-cran-codetools r-cran-foreign r-cran-kernsmooth r-cran-lattice r-cran-mass r-cran-matrix r-cran-mgcv r-cran-nlme r-cran-nnet r-cran-rpart r-cran-spatial r-cran-survival r-doc-html r-recommended
Next, update /etc/apt/sources.list and add these lines (comment out old R version, add new pkg list):