some (incomplete) types for HiGlass tilesets

ts-info.ts

type ChromSizes = [name: string, length: number][]

type ChromName = unknown;

type TilesetInfo = {};

type Bam = {
	min_pos: [number];
	max_pos: [number];
	max_zoom: number;
	max_width: number;
	tile_size: number;
	chromsizes: ChromSizes[];
};

type BedArcsDb = {
	min_pos: [number, number];
	max_pos: [number, number];
	max_length: number;
	max_width: number;
	max_zoom: number;
	zoom_step: number;
	assembly: string;
	chrom_names: unknown[];
	chrom_sizes: ChromSizes;
	tile_size: number;
};

type BedDb = {
	min_pos: [number];
	max_pos: [number];
	max_length: number;
	max_width: number;
	max_zoom: number;
	zoom_step: number;
	assembly: string;
	chrom_names: ChromName[];
	chrom_sizes: ChromSizes;
	tile_size: number;
	header: string;
	version: number;
};

type BedDb2d = {
	min_pos: [number, number];
	max_pos: [number, number];
	max_length: number;
	max_width: number;
	max_zoom: number;
	zoom_step: number;
	assembly: string;
	chrom_names: unknown[];
	chrom_sizes: ChromSizes;
	tile_size: number;
};

type BigWig = {
	min_pos: [0];
	max_pos: [number];
	max_width: number;
	max_zoom: number;
	tile_size: number;
	chromsizes: ChromSizes;
	aggregation_modes: Record<string, { name: string; value: string }>;
	range_modes: Record<string, { name: string; value: string }>;
};

type BigBed = BigWig;

type Cooler =
	& {
		chromsizes: ChromSizes;
		min_pos: [number, number];
		max_pos: [number, number];
		transforms?: { name: string; value: string }[];
		mirror_tiles?: "false";
	}
	& (
		| {
			max_width: number;
			bins_per_dimension: number;
		}
		| {
			resolutions: number[];
		}
	);

type Density = {
	max_pos: [number, number];
	max_width: number;
	max_zoom: number;
	min_pos: [number, number];
	mirror_tiles: "false";
};

type Geo = {
	zoom_step: number;
	tile_size: number;
	max_zoom: number;
	min_pos: [number, number];
	max_pos: [number, number];
	max_data_length: number;
};

type HiTile = {
	max_pos: [number];
	min_pos: [number];
	max_width: number;
	max_zoom: number;
	tile_size: number;
};

type ImTile = {
	tile_size: number;
	max_zoom: number;
	max_size: number;
	width?: number;
	height?: number;
	dtype?: number;
}

type MrMatrix = {
	min_pos: number;
	max_pos: number;
	resolutions: number[];
	mirror_tiles: "false";
	bins_per_dimension: 256;
}

type Multivec = {
	resolutions: number[];
	min_pos: number;
	max_pos: number;
	tile_size: number;
	shape: number[];
	row_infos?: string[];
}

type NpMatrix = {
	max_width: number;
	max_width1: number;
	min_pos: number;
	max_pos: number;
	max_zoom: number;
	mirror_tiles: "false";
	bins_per_dimension: number;
}

type NpVector = {
	max_width: number;
	min_pos: number;
	max_pos: number;
	max_zoom: number;
	bins_per_dimension: number;
	tile_size: number;
}

type Points = {
	min_pos: [number, number];
	max_pos: [number, number];
	max_width: number;
	max_zoom: 100;
}

type TimeInterval = {
	min_pos: [number],
	max_pos: [number],
	max_width: number;
	start_value: number;
	end_value: number;
}