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This is a simple Makefile spec that allows you to transform every .tsv file in your current directory to a .csv with a given tsv2csv python script
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# You can call this with: | |
# make -j N all_csv | |
# where N can be the number of processors you wish to use in parallel | |
# This Make rule uses the Python script `tsv2csv.py` to turn the first argument (the .tsv file) and dumps it to the output file | |
%.csv: %.tsv | |
python tsv2csv.py $< > $@ | |
# This gets all files in this directory that end in .tsv | |
TSV_SOURCES:=$(shell find $(SOURCEDIR) -name '*.tsv') | |
# This makes all of those .tsv files .csv and stores them in a variable | |
CSV_SOURCES:=$(TSV_SOURCES:.tsv=.csv) | |
# This is a dummy target that runs the command on each file | |
all_csv: $(CSV_SOURCES) |
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# Essentially copied from here: https://gist.github.com/nsonnad/7598574 | |
import sys | |
import csv | |
csv.field_size_limit(sys.maxsize) | |
# tabin = csv.reader(sys.stdin, dialect=csv.excel_tab) | |
file_in = sys.argv[1] | |
# Handle newlines properly | |
tabin = csv.reader(open(file_in, 'rU'), dialect=csv.excel_tab) | |
commaout = csv.writer(sys.stdout, dialect=csv.excel) | |
for row in tabin: | |
commaout.writerow(row) |
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