Created
December 20, 2023 13:40
-
-
Save maxrohleder/a42e543e360c50ccb2aa84f9127bc31f to your computer and use it in GitHub Desktop.
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
import numpy as np | |
def get_camera_center(_P): | |
return -np.linalg.inv(_P[:3, :3]) @ _P[:3, 3] | |
def angle_between_plane_and_line(line_direction: np.ndarray, point1, point2, point3): | |
# Calculate the normal vector of the plane | |
normal_vector = np.cross(point2-point1, point3-point1) | |
normal_vector /= np.linalg.norm(normal_vector) # normalize normal vector | |
line_direction /= np.linalg.norm(line_direction) # normalize line direction | |
# Calculate the angle between the normal vector of the plane and the line direction | |
angle_rad = np.arcsin(np.dot(normal_vector, line_direction)) | |
angle_deg = np.degrees(angle_rad) # optional | |
return angle_deg | |
# Two example projection matrices from real dicom scans at 0 and 90 degrees | |
P0 = np.array([ | |
-1.491806664, -6.0116547806, -0.0032140855, 497.8171012864, | |
-0.7840045398, 0.0883435020, 6.1466040404, 486.4775230631, | |
-0.0015992436, 0.0001893259, 0.0000025475, 1.0000000000 | |
]).reshape(3, 4) | |
P1 = np.array([ | |
5.944656294, -1.7327766731, -0.0146051869, 483.7323692488, | |
-0.1118475300, -0.7842383349, 6.1431458554, 492.9361593238, | |
-0.0002548330, -0.0015890854, -0.0000018072, 1.0000000000 | |
]).reshape(3, 4) | |
# construct 0-degree epipolar plane from camera positions and isocenter | |
C0, C1, iso_center = get_camera_center(P0), get_camera_center(P1), np.zeros(3) | |
# inverse camera coordinate transform M (invKR) | |
M0, M1 = -np.linalg.inv(P0[:3, :3]), -np.linalg.inv(P1[:3, :3]) | |
# calculate alpha for a point in view P0 at detector coordinate (0, 0) | |
point2d = np.array([0, 0, 1]) # homogenous coordinate | |
p_dir = M0 @ point2d | |
alpha = angle_between_plane_and_line(p_dir, C0, C1, iso_center) | |
# Cone Beam angle can be verified through imaging systems geometry | |
print(f"angle to isocenter plane: {alpha}") | |
sdd, ds = 1164, 300 # source detector distance and detector side length in mm | |
print(f"cone beam angle: {np.degrees(np.arcsin((ds/2)/sdd))}") | |
# Output | |
# angle to isocenter plane: 7.199223997233601 | |
# cone beam angle: 7.404066525634113 |
Sign up for free
to join this conversation on GitHub.
Already have an account?
Sign in to comment