mcallaway

I push an image:

    > docker push registry.gsc.wustl.edu/mcallawa/hello-world
    The push refers to a repository [registry.gsc.wustl.edu/mcallawa/hello-world]
    5f70bf18a086: Pushed
    b652ec3a27e7: Pushed
    latest: digest: sha256:fea8895f450959fa676bcc1df0611ea93823a735a01205fd8622846041d0c7cf size: 708

I try to pull that image from a different location:

mcallaway

docker_auth:
  image: "cesanta/docker_auth:stable"
  command: --v=2 --alsologtostderr /config/auth_config.yml
  ports:
    - 5001:5001
  volumes:
    - ./docker-auth/config:/config:ro
    - ./docker-auth/logs:/logs

mcallaway

heat_template_version: 2013-05-23

resources:

  server_port:
    type: OS::Neutron::Port
    properties:
      network: "development"
      fixed_ips:
        - subnet: "development-subnet"

mcallaway

heat_template_version: 2014-10-16

description: server cluster

parameters:
  size:
    type: number
    default: 2
    description: How many servers

mcallaway

heat_template_version: 2013-05-23

description: Template that installs a CoreOS server.

parameters:
  image:
    type: string
    label: Image name or ID
    description: Image to be used for server. Please use an Ubuntu based image.
    default: CoreOS-835.9.0

mcallaway

#!/bin/bash
#
#    This program is free software: you can redistribute it and/or modify
#    it under the terms of the GNU General Public License as published by
#    the Free Software Foundation, either version 3 of the License, or
#    (at your option) any later version.
#
#    This program is distributed in the hope that it will be useful,
#    but WITHOUT ANY WARRANTY; without even the implied warranty of
#    MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the

mcallaway

auto lo
iface lo inet loopback

auto em1
allow-bond em1
iface em1 inet manual
  bond-master bond0

auto em2
allow-bond em2

mcallaway

auto lo
 iface lo inet loopback
 #iface em1 inet manual
 #iface em2 inet manual
 auto br-ex
 allow-ovs br-ex
 iface br-ex inet static
   address 10.200.0.41
   netmask 255.255.252.0
   gateway 10.200.0.1

mcallaway

```
... more ...
2015-04-13 13:26:10-0500 mcallawa-trusty: 2015/04/13 13:26:10 Genome::InstrumentData::AlignmentResult::Bwa id(TEST: >>tojaeyah5.10-929ec81<< bwa 0.5.9 [-t 4 -q 5::] on 6173R/4-TAGCTT (2851949190) for H_HY-03023 (2725316319) against NCBI-human-build36 (101947881) (88399148E20A11E49DE785073F0CD76F)): Oh no!  Caught an exception while in the critical point where the BAM pipe was open: Failed to generate intermediate result!ERROR RUNNING COMMAND.  Exit code 1 from: /opt/plenv/.plenv/versions/5.10.1/bin/perl5.10.1 -I /gscuser/mcallawa/git/genome/lib/perl/Genome/Site/TGI/SiteLib -e 'use above "Genome"; Genome::InstrumentData::IntermediateAlignmentResult->get_or_create(aligner_index_id => "f3df7303bda74e638982fedfc0774226", aligner_name => "bwa", aligner_params => "-t1 -q 5", aligner_version => "0.5.9", flagstat_file => "", input_file => "/tmp/211.tmpdir/gm-genome_sys-2015-04-13_13_26_02--k5f4/anonymous0/2851949190-sanger-fastq-0.fastq", input_pass => "1", instrument_data_id => "2851949190", instrum

mcallaway

mcallawa@mcallawa-trusty:~/git/joinx/build$ make
Scanning dependencies of target boost-1.56
[  0%] Creating directories for 'boost-1.56'
[  1%] Performing download step (DIR copy) for 'boost-1.56'
[  1%] No patch step for 'boost-1.56'
[  2%] No update step for 'boost-1.56'
[  3%] Performing configure step for 'boost-1.56'
Building Boost.Build engine with toolset gcc... tools/build/src/engine/bin.linuxx86_64/b2
Detecting Python version... 2.7
Detecting Python root... /usr