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@meren
Last active December 20, 2015 06:59
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Output files generated by the oligotyping pipeline w/o the --quick directive.
meren ~/tmp/sample-run $ ls mock-env-aligned-c2-s1-a1.0-A0-M0/
COLORS MATRIX-PERCENT.txt OLIGOS.nexus
ENVIRONMENT.txt NETWORK.gexf READ-DISTRIBUTION.txt
FIGURES/ OLIGO-REPRESENTATIVES/ RUNINFO
FIGURES.cPickle OLIGO-REPRESENTATIVES.fasta RUNINFO.cPickle
MATRIX-COUNT.txt OLIGOS.fasta RUNINFO.log
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