Skip to content

Instantly share code, notes, and snippets.

@mhoban

mhoban/models.nex

Created June 14, 2016 21:13
Show Gist options
  • Save mhoban/ceaedcb64f90e9980682adbd69d327b5 to your computer and use it in GitHub Desktop.
Save mhoban/ceaedcb64f90e9980682adbd69d327b5 to your computer and use it in GitHub Desktop.
Download ZIP
Raw
models.nex
BEGIN mrbayes;
outgroup <outgroup>
[HKY+I+G]
lset nst=2 rates=invgamma;
[HKY+I]
lset applyto=() nst=2 rates=propinv
[HKY+G]
lset applyto=() nst=2 rates=gamma
[HKY]
lset applyto=() nst=2
mcmc ngen=1000000 samplefreq=1000 printfreq=1000 nchains=4 temp=0.2 nchains=20;
sumt burnin=100;
sump burnin=100;
END;
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment