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micahjsmith/julia-0.5.0 test failure on OS X 10.11.6 output

Created September 23, 2016 23:02
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julia-0.5.0 test failure on OS X 10.11.6 output
[micahsmith@dhcp-18-111-75-65 ~ ]$ julia -e "Base.runtests()"
From worker 3: * linalg/qr in 66.47 seconds, maxrss 359.77 MB
From worker 3: * linalg/dense in 27.46 seconds, maxrss 390.65 MB
From worker 3: * linalg/matmul in 90.14 seconds, maxrss 479.67 MB
From worker 3: * linalg/schur in 4.09 seconds, maxrss 484.56 MB
From worker 3: * linalg/special in 1.46 seconds, maxrss 486.74 MB
From worker 2: * linalg/triangular in 199.84 seconds, maxrss 706.77 MB
From worker 3: * linalg/eigen in 16.87 seconds, maxrss 500.92 MB
From worker 3: * linalg/svd in 6.72 seconds, maxrss 503.23 MB
From worker 2: * linalg/bunchkaufman in 29.27 seconds, maxrss 740.05 MB
From worker 3: * linalg/lapack in 16.72 seconds, maxrss 520.02 MB
From worker 3: * linalg/bidiag in 16.23 seconds, maxrss 546.70 MB
From worker 2: * linalg/tridiag in 17.38 seconds, maxrss 765.28 MB
From worker 2: * linalg/pinv in 6.67 seconds, maxrss 839.91 MB
From worker 3: * linalg/diagonal From worker 2: * linalg/givens in 3.25 seconds, maxrss 839.91 MB
From worker 2: * linalg/lu in 21.46 seconds, maxrss 839.91 MB
From worker 2: * linalg/symmetric in 7.61 seconds, maxrss 839.91 MB
From worker 2: * linalg/generic in 3.92 seconds, maxrss 840.20 MB
From worker 2: * linalg/uniformscaling in 17.72 seconds, maxrss 863.37 MB
From worker 4: * linalg/cholesky in 52.56 seconds, maxrss 300.95 MB
From worker 4: * linalg/hessenberg in 0.99 seconds, maxrss 303.12 MB
From worker 4: * linalg/arnoldi From worker 2: * linalg/lq in 45.38 seconds, maxrss 939.71 MB
WARNING: Method definition f(Tuple{Vararg{Int64, #N<:Any}}, AbstractArray{#T<:Any, #N<:Any}) in module Main at /usr/local/Cellar/julia/0.5.0/share/julia/test/core.jl:706 overwritten at /usr/local/Cellar/julia/0.5.0/share/julia/test/core.jl:712.
WARNING: Method definition f() in module JLCall14301 at /usr/local/Cellar/julia/0.5.0/share/julia/test/core.jl:3529 overwritten at /usr/local/Cellar/julia/0.5.0/share/julia/test/core.jl:3539.
From worker 2: * core in 21.17 seconds, maxrss 959.76 MB
From worker 2: * inference in 0.50 seconds, maxrss 960.38 MB
From worker 2: * keywordargs in 0.97 seconds, maxrss 961.15 MB
From worker 2: * numbers in 61.56 seconds, maxrss 1061.95 MB
From worker 2: * printf in 10.49 seconds, maxrss 1085.43 MB
From worker 2: * char in 0.63 seconds, maxrss 1090.87 MB
From worker 2: * string in 10.85 seconds, maxrss 1107.73 MB
From worker 2: * triplequote in 0.01 seconds, maxrss 1107.73 MB
From worker 2: * unicode in 2.85 seconds, maxrss 1116.44 MB
From worker 2: * dates in 26.85 seconds, maxrss 1183.11 MB
From worker 2: * dict in 7.68 seconds, maxrss 1195.57 MB
From worker 2: * hashing in 3.50 seconds, maxrss 1199.70 MB
From worker 2: * iobuffer in 0.80 seconds, maxrss 1203.10 MB
From worker 2: * staged in 0.48 seconds, maxrss 1203.24 MB
From worker 5: * subarray in 216.50 seconds, maxrss 714.73 MB
From worker 2: * offsetarray in 40.12 seconds, maxrss 1284.58 MB
From worker 2: * tuple in 1.26 seconds, maxrss 1284.81 MB
WARNING: could not attach metadata for @simd loop.
From worker 2: * reduce in 2.85 seconds, maxrss 1300.68 MB
From worker 2: * reducedim in 10.40 seconds, maxrss 1304.35 MB
From worker 2: * random in 8.12 seconds, maxrss 1312.50 MB
From worker 5: * arrayops in 36.15 seconds, maxrss 949.53 MB
From worker 5: * intfuncs in 0.81 seconds, maxrss 951.61 MB
From worker 5: * simdloop in 1.05 seconds, maxrss 952.32 MB
From worker 5: * vecelement in 1.30 seconds, maxrss 958.86 MB
From worker 5: * blas in 28.48 seconds, maxrss 1002.93 MB
From worker 2: * abstractarray in 57.76 seconds, maxrss 1396.13 MB
From worker 5: * sparse in 193.89 seconds, maxrss 1114.74 MB
From worker 5: * copy in 0.99 seconds, maxrss 1115.31 MB
From worker 5: * math Error During Test
From worker 5: Test threw an exception of type ErrorException
From worker 5: Expression: erfcx(1) ≈ 0.427583576155807
From worker 5: error compiling erfcx: could not load library "libopenspecfun"
From worker 5: dlopen(libopenspecfun.dylib, 1): Library not loaded: /usr/local/opt/libgfortran/lib/libgfortran.3.dylib
From worker 5: Referenced from: /usr/local/Cellar/julia/0.5.0/lib/julia//libopenspecfun.dylib
From worker 5: Reason: image not found
From worker 5: in include_string(::String, ::String) at ./loading.jl:441
From worker 5: in include_string(::String, ::String) at /usr/local/Cellar/julia/0.5.0/lib/julia/sys.dylib:?
From worker 5: in include_from_node1(::String) at ./loading.jl:491
From worker 5: in include_from_node1(::String) at /usr/local/Cellar/julia/0.5.0/lib/julia/sys.dylib:?
From worker 5: in macro expansion at ./util.jl:226 [inlined]
From worker 5: in runtests(::String) at /usr/local/Cellar/julia/0.5.0/share/julia/test/testdefs.jl:7
From worker 5: in (::Base.Serializer.__deserialized_types__.##16#24)(::String) at /usr/local/Cellar/julia/0.5.0/share/julia/test/runtests.jl:44
From worker 5: in (::Base.##625#627{Base.CallMsg{:call_fetch}})() at ./multi.jl:1421
From worker 5: in run_work_thunk(::Base.##625#627{Base.CallMsg{:call_fetch}}, ::Bool) at ./multi.jl:1001
From worker 5: in macro expansion at ./multi.jl:1421 [inlined]
From worker 5: in (::Base.##624#626{Base.CallMsg{:call_fetch},Base.MsgHeader,TCPSocket})() at ./event.jl:68
From worker 6: * fastmath in 3.62 seconds, maxrss 215.04 MB
From worker 6: * functional in 18.77 seconds, maxrss 277.39 MB
From worker 6: * operators in 0.37 seconds, maxrss 278.27 MB
From worker 6: * path in 2.63 seconds, maxrss 298.09 MB
From worker 6: * ccall in 3.21 seconds, maxrss 308.17 MB
From worker 6: * parse in 2.01 seconds, maxrss 310.10 MB
From worker 6: * loading in 0.05 seconds, maxrss 310.14 MB
From worker 6: * bigint in 1.50 seconds, maxrss 313.68 MB
From worker 6: * bigfloat in 0.20 seconds, maxrss 314.24 MB
From worker 6: * sorting in 28.10 seconds, maxrss 362.62 MB
From worker 6: * statistics in 8.16 seconds, maxrss 381.92 MB
From worker 6: * spawn [stdio passthrough ok]
From worker 6: in 18.61 seconds, maxrss 400.43 MB
From worker 6: * backtrace in 0.38 seconds, maxrss 407.48 MB
From worker 6: * priorityqueue in 0.90 seconds, maxrss 418.94 MB
From worker 6: * file in 35.41 seconds, maxrss 425.47 MB
From worker 2: * bitarray in 323.30 seconds, maxrss 1515.45 MB
From worker 6: * read in 16.89 seconds, maxrss 478.22 MB
From worker 6: * version in 0.73 seconds, maxrss 478.22 MB
From worker 6: * resolve in 2.79 seconds, maxrss 478.22 MB
From worker 6: * pollfd in 3.35 seconds, maxrss 478.22 MB
From worker 6: * mpfr From worker 2: * mmap in 18.38 seconds, maxrss 1515.45 MB
From worker 2: * complex in 4.61 seconds, maxrss 1515.45 MB
From worker 2: * socket in 2.46 seconds, maxrss 1522.34 MB
From worker 2: * floatapprox in 0.17 seconds, maxrss 1522.38 MB
From worker 2: * datafmt in 3.25 seconds, maxrss 1522.94 MB
From worker 2: * reflection in 3.72 seconds, maxrss 1529.82 MB
From worker 2: * regex in 0.31 seconds, maxrss 1529.94 MB
From worker 2: * float16 in 0.68 seconds, maxrss 1530.15 MB
From worker 2: * combinatorics in 0.21 seconds, maxrss 1530.20 MB
From worker 2: * sysinfo in 0.34 seconds, maxrss 1530.26 MB
From worker 2: * env in 0.32 seconds, maxrss 1530.36 MB
From worker 2: * rounding in 0.51 seconds, maxrss 1530.50 MB
From worker 7: * broadcast in 20.57 seconds, maxrss 260.45 MB
From worker 7: * mod2pi From worker 8: * euler in 1.17 seconds, maxrss 210.64 MB
From worker 2: * ranges in 16.45 seconds, maxrss 1541.69 MB
From worker 8: * show in 12.37 seconds, maxrss 268.66 MB
From worker 2: * lineedit in 2.09 seconds, maxrss 1543.13 MB
From worker 8: * replcompletions in 2.66 seconds, maxrss 272.26 MB
From worker 8: * replutil in 2.93 seconds, maxrss 281.68 MB
From worker 2: * repl in 3.65 seconds, maxrss 1549.41 MB
From worker 8: * sets in 2.01 seconds, maxrss 285.16 MB
From worker 8: * goto in 0.03 seconds, maxrss 285.18 MB
From worker 8: * llvmcall in 0.13 seconds, maxrss 285.54 MB
From worker 8: * grisu in 1.47 seconds, maxrss 289.04 MB
From worker 2: * test in 5.57 seconds, maxrss 1568.91 MB
From worker 2: * meta in 0.21 seconds, maxrss 1568.98 MB
From worker 2: * stacktraces in 1.03 seconds, maxrss 1569.80 MB
From worker 2: * profile in 2.82 seconds, maxrss 1574.13 MB
From worker 8: * nullable in 6.83 seconds, maxrss 303.70 MB
From worker 8: * docs in 2.21 seconds, maxrss 318.41 MB
From worker 8: * markdown in 2.47 seconds, maxrss 325.99 MB
From worker 8: * base64 in 0.45 seconds, maxrss 326.14 MB
From worker 2: * libgit2 in 9.90 seconds, maxrss 1605.70 MB
From worker 8: * serialize in 4.06 seconds, maxrss 332.79 MB
Warning: threaded loop executed in order
From worker 8: * threads in 2.23 seconds, maxrss 346.46 MB
From worker 8: * enums in 1.07 seconds, maxrss 352.67 MB
From worker 2: * misc in 20.44 seconds, maxrss 1774.09 MB
From worker 2: * i18n in 0.01 seconds, maxrss 1774.09 MB
From worker 2: * workspace in 0.61 seconds, maxrss 1774.09 MB
From worker 2: * libdl in 1.38 seconds, maxrss 1774.09 MB
From worker 2: * int in 2.00 seconds, maxrss 1774.09 MB
From worker 2: * checked in 6.90 seconds, maxrss 1777.30 MB
From worker 2: * intset in 0.40 seconds, maxrss 1777.30 MB
From worker 2: * floatfuncs in 1.71 seconds, maxrss 1777.30 MB
From worker 2: * parallel in 58.11 seconds, maxrss 1777.30 MB
From worker 2: * inline in 0.15 seconds, maxrss 1777.30 MB
From worker 2: * boundscheck in 1.63 seconds, maxrss 1777.30 MB
From worker 2: * error in 0.59 seconds, maxrss 1777.30 MB
WARNING: Method definition ambig(Any, Integer) in module Main at /usr/local/Cellar/julia/0.5.0/share/julia/test/ambiguous.jl:7 overwritten at /usr/local/Cellar/julia/0.5.0/share/julia/test/ambiguous.jl:79.
From worker 2: * ambiguous Skipping Base.<|
From worker 2: Skipping Base.>:
From worker 2: Skipping Base.active_repl
From worker 2: Skipping Base.active_repl_backend
From worker 2: in 0.98 seconds, maxrss 1777.30 MB
From worker 2: * cartesian in 0.00 seconds, maxrss 1777.30 MB
From worker 2: * fft in 12.65 seconds, maxrss 1777.30 MB
From worker 8: * cmdlineargs in 105.57 seconds, maxrss 388.86 MB
From worker 2: * dsp in 6.15 seconds, maxrss 1777.30 MB
From worker 8: * examples in 10.98 seconds, maxrss 394.92 MB
Exception running test linalg/diagonal :
On worker 3:
LoadError: error compiling logdet: error compiling mod2pi: could not load library "libopenspecfun"
dlopen(libopenspecfun.dylib, 1): Library not loaded: /usr/local/opt/libgfortran/lib/libgfortran.3.dylib
Referenced from: /usr/local/Cellar/julia/0.5.0/lib/julia//libopenspecfun.dylib
Reason: image not found
in macro expansion; at /usr/local/Cellar/julia/0.5.0/share/julia/test/linalg/diagonal.jl:62 [inlined]
in anonymous at ./<missing>:?
in include_string at ./loading.jl:441
in jlcall_include_string_25183 at /usr/local/Cellar/julia/0.5.0/lib/julia/sys.dylib:?
in include_from_node1 at ./loading.jl:491
in jlcall_include_from_node1_20163 at /usr/local/Cellar/julia/0.5.0/lib/julia/sys.dylib:?
in macro expansion at ./util.jl:226 [inlined]
in runtests at /usr/local/Cellar/julia/0.5.0/share/julia/test/testdefs.jl:7
in #16 at /usr/local/Cellar/julia/0.5.0/share/julia/test/runtests.jl:44
in #625 at ./multi.jl:1421
in run_work_thunk at ./multi.jl:1001
in macro expansion at ./multi.jl:1421 [inlined]
in #624 at ./event.jl:68
while loading /usr/local/Cellar/julia/0.5.0/share/julia/test/linalg/diagonal.jl, in expression starting on line 12
Exception running test linalg/arnoldi :
On worker 4:
LoadError: error compiling naupd: could not load library "libarpack"
dlopen(libarpack.dylib, 1): Library not loaded: /usr/local/opt/libgfortran/lib/libgfortran.3.dylib
Referenced from: /usr/local/opt/arpack-julia/lib/libarpack.dylib
Reason: image not found
in aupd_wrapper at ./linalg/arpack.jl:49
in #_eigs#62 at ./linalg/arnoldi.jl:268
in #_eigs at ./<missing>:0
in #eigs#55 at ./linalg/arnoldi.jl:78
in #eigs at ./<missing>:0
in #eigs#54 at ./linalg/arnoldi.jl:77
in #eigs at ./<missing>:0
in macro expansion; at /usr/local/Cellar/julia/0.5.0/share/julia/test/linalg/arnoldi.jl:35 [inlined]
in anonymous at ./<missing>:?
in include_string at ./loading.jl:441
in jlcall_include_string_25183 at /usr/local/Cellar/julia/0.5.0/lib/julia/sys.dylib:?
in include_from_node1 at ./loading.jl:491
in jlcall_include_from_node1_20163 at /usr/local/Cellar/julia/0.5.0/lib/julia/sys.dylib:?
in macro expansion at ./util.jl:226 [inlined]
in runtests at /usr/local/Cellar/julia/0.5.0/share/julia/test/testdefs.jl:7
in #16 at /usr/local/Cellar/julia/0.5.0/share/julia/test/runtests.jl:44
in #625 at ./multi.jl:1421
in run_work_thunk at ./multi.jl:1001
in macro expansion at ./multi.jl:1421 [inlined]
in #624 at ./event.jl:68
while loading /usr/local/Cellar/julia/0.5.0/share/julia/test/linalg/arnoldi.jl, in expression starting on line 8
Exception running test math :
On worker 5:
LoadError: There was an error during testing
in record at ./test.jl:397
in do_test at ./test.jl:281
in include_string at ./loading.jl:441
in jlcall_include_string_25183 at /usr/local/Cellar/julia/0.5.0/lib/julia/sys.dylib:?
in include_from_node1 at ./loading.jl:491
in jlcall_include_from_node1_20163 at /usr/local/Cellar/julia/0.5.0/lib/julia/sys.dylib:?
in macro expansion at ./util.jl:226 [inlined]
in runtests at /usr/local/Cellar/julia/0.5.0/share/julia/test/testdefs.jl:7
in #16 at /usr/local/Cellar/julia/0.5.0/share/julia/test/runtests.jl:44
in #625 at ./multi.jl:1421
in run_work_thunk at ./multi.jl:1001
in macro expansion at ./multi.jl:1421 [inlined]
in #624 at ./event.jl:68
while loading /usr/local/Cellar/julia/0.5.0/share/julia/test/math.jl, in expression starting on line 306
Exception running test mpfr :
On worker 6:
LoadError: error compiling setprecision: error compiling #439: error compiling besselj: error compiling besselj: error compiling _besselj: could not load library "libopenspecfun"
dlopen(libopenspecfun.dylib, 1): Library not loaded: /usr/local/opt/libgfortran/lib/libgfortran.3.dylib
Referenced from: /usr/local/Cellar/julia/0.5.0/lib/julia//libopenspecfun.dylib
Reason: image not found
in setprecision at ./mpfr.jl:848
in include_string at ./loading.jl:441
in jlcall_include_string_25183 at /usr/local/Cellar/julia/0.5.0/lib/julia/sys.dylib:?
in include_from_node1 at ./loading.jl:491
in jlcall_include_from_node1_20163 at /usr/local/Cellar/julia/0.5.0/lib/julia/sys.dylib:?
in macro expansion at ./util.jl:226 [inlined]
in runtests at /usr/local/Cellar/julia/0.5.0/share/julia/test/testdefs.jl:7
in #16 at /usr/local/Cellar/julia/0.5.0/share/julia/test/runtests.jl:44
in #625 at ./multi.jl:1421
in run_work_thunk at ./multi.jl:1001
in macro expansion at ./multi.jl:1421 [inlined]
in #624 at ./event.jl:68
while loading /usr/local/Cellar/julia/0.5.0/share/julia/test/mpfr.jl, in expression starting on line 424
Exception running test mod2pi :
On worker 7:
LoadError: error compiling mod2pi: could not load library "libopenspecfun"
dlopen(libopenspecfun.dylib, 1): Library not loaded: /usr/local/opt/libgfortran/lib/libgfortran.3.dylib
Referenced from: /usr/local/Cellar/julia/0.5.0/lib/julia//libopenspecfun.dylib
Reason: image not found
in testModPi at /usr/local/Cellar/julia/0.5.0/share/julia/test/mod2pi.jl:167
in include_string at ./loading.jl:441
in jlcall_include_string_25183 at /usr/local/Cellar/julia/0.5.0/lib/julia/sys.dylib:?
in include_from_node1 at ./loading.jl:491
in jlcall_include_from_node1_20163 at /usr/local/Cellar/julia/0.5.0/lib/julia/sys.dylib:?
in macro expansion at ./util.jl:226 [inlined]
in runtests at /usr/local/Cellar/julia/0.5.0/share/julia/test/testdefs.jl:7
in #16 at /usr/local/Cellar/julia/0.5.0/share/julia/test/runtests.jl:44
in #625 at ./multi.jl:1421
in run_work_thunk at ./multi.jl:1001
in macro expansion at ./multi.jl:1421 [inlined]
in #624 at ./event.jl:68
while loading /usr/local/Cellar/julia/0.5.0/share/julia/test/mod2pi.jl, in expression starting on line 186
ERROR: LoadError: Some tests exited with errors.
in (::##11#19)() at /usr/local/Cellar/julia/0.5.0/share/julia/test/runtests.jl:72
in cd(::##11#19, ::String) at ./file.jl:59
in include_from_node1(::String) at ./loading.jl:488
in include_from_node1(::String) at /usr/local/Cellar/julia/0.5.0/lib/julia/sys.dylib:?
in process_options(::Base.JLOptions) at ./client.jl:262
in _start() at ./client.jl:318
in _start() at /usr/local/Cellar/julia/0.5.0/lib/julia/sys.dylib:?
while loading /usr/local/Cellar/julia/0.5.0/share/julia/test/runtests.jl, in expression starting on line 26
ERROR: A test has failed. Please submit a bug report (https://github.com/JuliaLang/julia/issues)
including error messages above and the output of versioninfo():
Julia Version 0.5.0
Commit 3c9d753* (2016-09-19 18:14 UTC)
Platform Info:
System: Darwin (x86_64-apple-darwin15.6.0)
CPU: Intel(R) Core(TM) i5-4570S CPU @ 2.90GHz
WORD_SIZE: 64
BLAS: libopenblas (DYNAMIC_ARCH NO_AFFINITY Haswell)
LAPACK: libopenblas
LIBM: libopenlibm
LLVM: libLLVM-3.7.1 (ORCJIT, haswell)
in runtests(::Array{String,1}, ::Int64) at ./interactiveutil.jl:567
in runtests() at ./interactiveutil.jl:556
in eval(::Module, ::Any) at ./boot.jl:234
in eval(::Module, ::Any) at /usr/local/Cellar/julia/0.5.0/lib/julia/sys.dylib:?
in process_options(::Base.JLOptions) at ./client.jl:239
in _start() at ./client.jl:318
in _start() at /usr/local/Cellar/julia/0.5.0/lib/julia/sys.dylib:?
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