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michaelbarton/starfish-rake-sge.rb

Created August 12, 2008 15:57
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starfish-rake-sge.rb
desc 'Loads all the alignment codon data'
task :load_alignment_codons => :clear_alignment_codons do
starfish = %x|which starfish|.strip
loader = PROJECT_ROOT + '/model/starfish/load_alignment_codons.rb'
p = lambda{ system( "qsub -cwd -j y -V #{starfish} #{loader}") }
p.call
sleep(120)
16.times { p.call }
end
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