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May 1, 2018 18:31
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pandas benchmark for evaluating concat and append. Please see the question on https://stackoverflow.com/questions/15819050/pandas-dataframe-concat-vs-append/48168086#48168086
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setup = ''' | |
import pandas as pd | |
import numpy as np | |
df_small = pd.DataFrame(np.random.randn(10, 1), columns=[str(1)]) | |
df_medium = pd.DataFrame(np.random.randn(100, 10), columns=[str(i) for i in range(0, 10)]) | |
df_large = pd.DataFrame(np.random.randn(1000, 100), columns=[str(i) for i in range(0, 100)]) | |
''' | |
if __name__ == '__main__': | |
import timeit | |
print('ignore_index = False') | |
print('small, append', timeit.timeit('df = df_small.append(df_small)', setup=setup, number=1000)) | |
print('medium, append', timeit.timeit('df = df_medium.append(df_medium)', setup=setup, number=1000)) | |
print('large, append', timeit.timeit('df = df_large.append(df_large)', setup=setup, number=1000)) | |
print('small, concat ignore_index=True', timeit.timeit('df = pd.concat([df_small, df_small])', setup=setup, number=1000)) | |
print('medium, concat ignore_index=True', timeit.timeit('df = pd.concat([df_medium, df_medium])', setup=setup, number=1000)) | |
print('large, concat ignore_index=True', timeit.timeit('df = pd.concat([df_large, df_large])', setup=setup, number=1000)) | |
print('ignore_index = True') | |
print('small, append', timeit.timeit('df = df_small.append(df_small, ignore_index = True)', setup=setup, number=1000)) | |
print('medium, append', timeit.timeit('df = df_medium.append(df_medium, ignore_index = True)', setup=setup, number=1000)) | |
print('large, append', timeit.timeit('df = df_large.append(df_large, ignore_index = True)', setup=setup, number=1000)) | |
print('small, concat ignore_index=True', timeit.timeit('df = pd.concat([df_small, df_small], ignore_index = True)', setup=setup, number=1000)) | |
print('medium, concat ignore_index=True', timeit.timeit('df = pd.concat([df_medium, df_medium], ignore_index = True)', setup=setup, number=1000)) | |
print('large, concat ignore_index=True', timeit.timeit('df = pd.concat([df_large, df_large], ignore_index = True)', setup=setup, number=1000)) |
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