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Hypothesis testing on normally distributed data in R. Full article at: http://www.firsttimeprogrammer.blogspot.com/2015/07/hypothesis-testing-on-normally.html
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############################################################################### | |
# The code below can be used to perform a z-test under the following | |
# assumptions: | |
# 1. The data is normally distributed | |
# 2. Samples are iid | |
# | |
# Remember that: | |
# 1.Low pvalue: strong empirical evidence against h0 | |
# 2.High pvalue: little or 'no' empirical evidence against h0 | |
# | |
# Generally, as a rule of thumb pvalue < 0.05 can be considered low | |
# however it depends on many factors and I'd rather not dive into | |
# this :) | |
# Data to perform the test on | |
data_vector <- c(63, 75, 84, 58, 52, 96, 63, 55, 76, 83) | |
# Left tail test | |
# H0: mu >= mu0 | |
# H1: mu < mu0 | |
t.test.left <- function(data, mu0, alpha) | |
{ | |
t.stat <- (mean(data) - mu0) / (sqrt(var(data) / length(data))) | |
dof <- length(data) - 1 | |
t.critical <- qt(alpha, df= dof) #Es alpha 0.05 -> -1.64 (df=Inf) | |
p.value <- pt(t.stat, df= dof) | |
if(t.stat <= t.critical) | |
{ | |
print("Reject H0") | |
} | |
else | |
{ | |
print("Accept H0") | |
} | |
print('T statistic') | |
print(t.stat) | |
print('T critical value') | |
print(t.critical) | |
print('P value') | |
print(p.value) | |
print("#####################") | |
return(t.stat) | |
} | |
t.test.left(data_vector, 73, 0.05) | |
# Right tail test | |
# H0: mu <= mu0 | |
# H1: mu > mu0 | |
t.test.right <- function(data, mu0, alpha) | |
{ | |
t.stat <- (mean(data) - mu0) / (sqrt(var(data) / length(data))) | |
dof <- length(data) - 1 | |
t.critical <- qt(1-alpha, df= dof) #Es alpha 0.05 -> 1.64 (df=Inf) | |
p.value <- 1 - pt(t.stat, df= dof) | |
if(t.stat >= t.critical) | |
{ | |
print("Reject H0") | |
} | |
else | |
{ | |
print("Accept H0") | |
} | |
print('T statistic') | |
print(t.stat) | |
print('T critical value') | |
print(t.critical) | |
print('P value') | |
print(p.value) | |
print("#####################") | |
return(t.stat) | |
} | |
t.test.right(data_vector, 73, 0.05) | |
# Two tail z test | |
# H0: mu = mu0 | |
# H1: mu != mu0 | |
t.test.twoTails <- function(data, mu0, alpha) | |
{ | |
t.stat <- abs((mean(data) - mu0)) / (sqrt(var(data) / length(data))) | |
dof <- length(data) - 1 | |
t.critical <- qt(1-alpha/2, df= dof) #Es alpha 0.05 -> -1.9599 (df=Inf) | |
p.value <- 2*(1-pt(t.stat, df= dof)) | |
if(t.stat >= t.critical) | |
{ | |
print("Reject H0") | |
} | |
else | |
{ | |
print("Accept H0") | |
} | |
print('T statistic') | |
print(t.stat) | |
print('T critical values') | |
print(c(-t.critical,t.critical)) | |
print('P value') | |
print(p.value) | |
print("#####################") | |
return(t.stat) | |
} | |
t.test.twoTails(data_vector, 73, 0.05) | |
############################################################################ | |
# Output | |
# > t.test.left(data_vector, 73, 0.05) | |
# [1] "Accept H0" | |
# [1] "T statistic" | |
# [1] -0.5454726 | |
# [1] "T critical value" | |
# [1] -1.833113 | |
# [1] "P value" | |
# [1] 0.2993426 | |
# [1] "#####################" | |
# [1] -0.5454726 | |
# > t.test.right(data_vector, 73, 0.05) | |
# [1] "Accept H0" | |
# [1] "T statistic" | |
# [1] -0.5454726 | |
# [1] "T critical value" | |
# [1] 1.833113 | |
# [1] "P value" | |
# [1] 0.7006574 | |
# [1] "#####################" | |
# [1] -0.5454726 | |
# > t.test.twoTails(data_vector, 73, 0.05) | |
# [1] "Accept H0" | |
# [1] "T statistic" | |
# [1] 0.5454726 | |
# [1] "T critical values" | |
# [1] -2.262157 2.262157 | |
# [1] "P value" | |
# [1] 0.5986851 | |
# [1] "#####################" | |
# [1] 0.5454726 |
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