git ls-tree --full-tree -r HEAD
Stop tracking files
git rm --cached filename_here
Sasha (Alexander) Mikheyev mikheyev
mikheyev
/ git cheat sheet.md
Last active
December 29, 2015 17:09
Git cheat sheet. These are things I wanted to do with git, and now can
mikheyev
/ readme.md
Created
April 27, 2014 07:42
— forked from drobbins/readme.md
For a variety of reasons, my Papers2 library folder (~/Library/Application Support/Papers2) was cluttered with many duplicate papers, generally only one of which was linked to a document in Papers2. Here is how I cleaned it up.
- From a Terminal,
cd ~/Library/Application\ Support. open .- Copy the
Papers2folder to the Desktop. This is your backup. - In Papers2,
cmd+,, select Library, select Add next to "Rename files in library folder as:", and select Separator -> _ then click Apply. - Back in your Terminal,
find ./ -iregex ".*[^_]\.pdf" -delete
- If you want to see what's going to be deleted before doing it, run
find ./ -iregex ".*[^_]\.pdf"
mikheyev
/ README.md
Last active
August 29, 2015 14:06
— forked from jasondavies/README.md
A demo of Mike Bostock’s TopoJSON using states & provinces boundaries from Natural Earth.
With simplification turned on (-s 100), this reduces the original 57MB GeoJSON file to a mere 515KB!
mikheyev
/ world-topo-min.json
Last active
August 16, 2016 15:29
World map from http://techslides.com/d3-map-starter-kit/ but with pastel colors
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mikheyev
/ ERCC92.fasta
Created
June 13, 2015 22:53
fasta sequences for ERCC92 spike-in mix https://www.lifetechnologies.com/order/catalog/product/4456740
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| >ERCC-00002 | |
| TCCAGATTACTTCCATTTCCGCCCAAGCTGCTCACAGTATACGGGCGTCG | |
| GCATCCAGACCGTCGGCTGATCGTGGTTTTACTAGGCTAGACTAGCGTAC | |
| GAGCACTATGGTCAGTAATTCCTGGAGGAATAGGTACCAAGAAAAAAACG | |
| AACCTTTGGGTTCCAGAGCTGTACGGTCGCACTGAACTCGGATAGGTCTC | |
| AGAAAAACGAAATATAGGCTTACGGTAGGTCCGAATGGCACAAAGCTTGT | |
| TCCGTTAGCTGGCATAAGATTCCATGCCTAGATGTGATACACGTTTCTGG | |
| AAACTGCCTCGTCATGCGACTGTTCCCCGGGGTCAGGGCCGCTGGTATTT | |
| GCTGTAAAGAGGGGCGTTGAGTCCGTCCGACTTCACTGCCCCCTTTCAGC | |
| CTTTTGGGTCCTGTATCCCAATTCTCAGAGGTCCCGCCGTACGCTGAGGA |
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| ERCC-00002 ERCC exon 1 1061 0.000000 + . gene_id "ERCC-00002"; transcript_id "DQ459430"; | |
| ERCC-00003 ERCC exon 1 1023 0.000000 + . gene_id "ERCC-00003"; transcript_id "DQ516784"; | |
| ERCC-00004 ERCC exon 1 523 0.000000 + . gene_id "ERCC-00004"; transcript_id "DQ516752"; | |
| ERCC-00009 ERCC exon 1 984 0.000000 + . gene_id "ERCC-00009"; transcript_id "DQ668364"; | |
| ERCC-00012 ERCC exon 1 994 0.000000 + . gene_id "ERCC-00012"; transcript_id "DQ883670"; | |
| ERCC-00013 ERCC exon 1 808 0.000000 + . gene_id "ERCC-00013"; transcript_id "EF011062"; | |
| ERCC-00014 ERCC exon 1 1957 0.000000 + . gene_id "ERCC-00014"; transcript_id "DQ875385"; | |
| ERCC-00016 ERCC exon 1 844 0.000000 + . gene_id "ERCC-00016"; transcript_id "DQ883664"; | |
| ERCC-00017 ERCC exon 1 1136 0.000000 + . gene_id "ERCC-00017"; transcript_id "DQ459420"; | |
| ERCC-00019 ERCC exon 1 644 0.000000 + . gene_id "ERCC-00019"; transcript_id "DQ883651"; |