Ipython installation/update notes

ipython_notes.sh

# =====================================================================
# Al instalar una nueva nueva versión de ipython, para que se actualicen
# correctamente los archivos de configuración de usuario se necesita:

ipython -upgrade

# Log de ejemplo:
#**********************************************************************
#I am going to upgrade your configuration in:
#/home/miltonlab/.ipython
#Initializing from configuration: /home/miltonlab/ddsunl/sga/sgaenv/lib/python2.5/site-packages/IPython/UserConfig
#
#Successful upgrade!
#
#All files in your directory:
#/home/miltonlab/.ipython
#which would have been overwritten by the upgrade were backed up with a .old
#extension.  If you had made particular customizations in those files you may
#want to merge them back into the new files.
#Please press <RETURN> to start IPython.
#**********************************************************************
# =====================================================================
# ipython 2.0 Error: IPython.kernel has been replaced by IPython.parallel
# Problem with some ipython versions  on system

apt-get remove ipython # version < 2.0 
apt-get rmove tornado
pip install tornado --upgrade

# =====================================================================
# pandoc
# The most important dependency of nbconvert is Pandoc 1.10 or later, a document format translation program. 
# This is not a  Python package, so it cannot be expressed as a regular IPython dependency with setuptools.

apt-get install pandoc
pip install about sh pandoc