In this article, I will share some of my experience on installing NVIDIA driver and CUDA on Linux OS. Here I mainly use Ubuntu as example. Comments for CentOS/Fedora are also provided as much as I can.
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def sigmoid(X): | |
'''Compute the sigmoid function ''' | |
#d = zeros(shape=(X.shape)) | |
den = 1.0 + e ** (-1.0 * X) | |
d = 1.0 / den | |
return d |
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/* Read this comment first: https://gist.github.com/tonious/1377667#gistcomment-2277101 | |
* 2017-12-05 | |
* | |
* -- T. | |
*/ | |
#define _XOPEN_SOURCE 500 /* Enable certain library functions (strdup) on linux. See feature_test_macros(7) */ | |
#include <stdlib.h> | |
#include <stdio.h> |
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import multiprocessing | |
import pandas as pd | |
import numpy as np | |
def _apply_df(args): | |
df, func, kwargs = args | |
return df.apply(func, **kwargs) | |
def apply_by_multiprocessing(df, func, **kwargs): | |
workers = kwargs.pop('workers') |
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''' | |
Non-parametric computation of entropy and mutual-information | |
Adapted by G Varoquaux for code created by R Brette, itself | |
from several papers (see in the code). | |
This code is maintained at https://github.com/mutualinfo/mutual_info | |
Please download the latest code there, to have improvements and | |
bug fixes. |
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{ | |
"cells": [ | |
{ | |
"cell_type": "code", | |
"execution_count": 1, | |
"metadata": { | |
"collapsed": false | |
}, | |
"outputs": [], | |
"source": [ |
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echo `date`; | |
dir=(`dirname $1`) | |
base=(`basename $1`) | |
echo "1/7 Preparing files"; | |
cat $1 | sed 's/ "/\t/g' | sed 's/"; /\t/g' | cut -f1,4,5,7,10,12,16,18,22 | sed 's/";//' | awk '!x[$6]++' | awk '{print $6"\t"$0;}' > $dir/enst_annotation.tmp; |
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# Prepare Steps: | |
# We are assuming we’re using CUDA 7.5 | |
# Clone and Build latest Mesos with GPUs (skipping instructions here…) | |
# CUDA prepare script for ubuntu 14.04 with AWS G2 instance. | |
# http://tleyden.github.io/blog/2015/11/22/cuda-7-dot-5-on-aws-gpu-instance-running-ubuntu-14-dot-04/ | |
# Start mesos master and slave | |
# ./mesos-master --work_dir=/tmp/mesos | |
# sudo GLOG_v=1 ./mesos-slave --isolation=gpu/nvidia --master=`hostname -i`:5050 --nvidia_gpu_devices=0 | |
# Add cuda bin to PATH |
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#! /bin/sh | |
### BEGIN INIT INFO | |
# Provides: jupyter | |
# Required-Start: $remote_fs $syslog | |
# Required-Stop: $remote_fs $syslog | |
# Default-Start: 2 3 4 5 | |
# Default-Stop: 0 1 6 | |
# Short-Description: Start jupyter | |
# Description: This file should be used to construct scripts to be | |
# placed in /etc/init.d. |
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'''This script goes along the blog post | |
"Building powerful image classification models using very little data" | |
from blog.keras.io. | |
It uses data that can be downloaded at: | |
https://www.kaggle.com/c/dogs-vs-cats/data | |
In our setup, we: | |
- created a data/ folder | |
- created train/ and validation/ subfolders inside data/ | |
- created cats/ and dogs/ subfolders inside train/ and validation/ | |
- put the cat pictures index 0-999 in data/train/cats |
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