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mipearson/migrate-bootstrap.sh

Created July 24, 2011 07:35
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Bootstrap migrate-n on a fresh ubuntu 10.04 system
Raw
migrate-bootstrap.sh
#!/usr/bin/bash
set -e
set -v
sudo apt-get update
sudo apt-get install -y libopenmpi-dev build-essential openmpi-bin screen sendmail
sudo apt-get upgrade
wget http://popgen.sc.fsu.edu/currentversions/migrate-3.2.15.linuxubuntu.tar.gz
tar -xzvf migrate-3.2.15.linuxubuntu.tar.gz
cd migrate-3.2.15/src
./configure --enable-sse2
make clean
make -j8 && make clean && make mpis -j8
sudo mv migrate-n /usr/bin/
sudo mv migrate-n-mpi /usr/bin
#cd ../example
#time mpirun -c 8 migrate-n-mpi parmfile.testbayes -nomenu
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