mja

homebrew install gfortran
homebrew install python
homebrew install distribute
homebrew install pip
pip install ipython
pip install numpy
pip install scipy
pip install -f http://downloads.sourceforge.net/project/matplotlib/matplotlib/matplotlib-1.0/matplotlib-1.0.0.tar.gz matplotlib

mja

[diff]
	tool = chdiff

[difftool]
	prompt = false

[difftool "chdiff"]
	cmd = /usr/bin/env chdiff "$LOCAL" "$REMOTE"

mja

>Error # 2072 
>There was an unanticipated problem with the license for this product. 
>This command not executed. 
>Specific symptom number: 4 
 
End of job:  7 command lines  1 errors  0 warnings  0 CPU seconds

mja

source("http://bioconductor.org/biocLite.R")
biocLite("Rdbi")

mja

nitt <- dim(m5a.2$VCV)[1] # number of iterations
VCV <- array(as.vector(m5a.2$VCV), dim=c(nitt, 2, 2, 2),
             dimnames=list(itt=1:nitt, trait=c('y.hol', 'y.car'), trait=c('y.hol', 'y.car'), random=c('id', 'units')))

mja

# Solution to the Messy Matters ubercousin Bonus Puzzle
# http://messymatters.com/2011/09/30/smallworld/


library(pedantics)


fixPedigree( # automatically create entries for the granddams/grandsires
as.data.frame(matrix(
#  id            dam      sire

mja

# Conky, a system monitor, based on torsmo
#
# conky configuration
# edited by darcon@gmail.com

# set to yes if you want Conky to be forked in the background
background no

# X font when Xft is disabled, you can pick one with program xfontsel
#font 5x7

mja

STAN_HOME=$HOME/Applications/stan
export STAN_HOME

mja

require(OpenMx)
library(parallel)

data(demoOneFactor)
manifests <- names(demoOneFactor)
latents <- c("G")

factorModel <- mxModel(name="One Factor",
    type="RAM",
    manifestVars = manifests,

mja

library("ggplot2")
library(plyr)

n.sims <- 100
max.n.vars <- 100
n.obs <- 100

res <- data.frame()

for (sim in 1:n.sims)