The mysql dump used to create the RDB_database did not load all the tables from RDB_shared.
From Boris
I am not sure I understand what problem you have.
As you can see, all 17 Dana’s tables are present in the dump file:
$ cat proj_emrUCSF2018Mar.sql | grep "CREATE TABLE"
CREATE TABLE `ALLERGIES` (
CREATE TABLE `BILLING` (
CREATE TABLE `COVERAGE` (
CREATE TABLE `DEPARTMENTS` (
CREATE TABLE `DIAGNOSES` (
CREATE TABLE `ENCOUNTERS` (
CREATE TABLE `EXTRACT_DATE` (
CREATE TABLE `FLOWSHEETROWDIM` (
CREATE TABLE `FLOWSHEETVALUEFACT` (
CREATE TABLE `IMMUNIZATIONS` (
CREATE TABLE `LAB` (
CREATE TABLE `MEDICATION_ORDERS` (
CREATE TABLE `PATIENTS` (
CREATE TABLE `PATIENT_RACE` (
CREATE TABLE `PROCEDURE_ORDERS` (
CREATE TABLE `PROVIDERS` (
CREATE TABLE `VITALS` (
$
But when I run the same grep command on MATE desktop:
mfrigaard@MPROJECT:~$ pwd
/home/mfrigaard
mfrigaard@MPROJECT:~$ cd /mnt/data
mfrigaard@MPROJECT:/mnt/data$ ls
ALLERGIES.txt FLOWSHEETROWDIM.txt PATIENT_RACE.txt
BILLING.txt FLOWSHEETVALUEFACT.txt PATIENTS.csv
code IMMUNIZATIONS.csv PATIENTS.txt
COVERAGE.txt IMMUNIZATIONS.txt PROCEDURE_ORDERS.txt
DEPARTMENTS.txt LAB.txt proj_emrUCSF2018Aug.sql
DIAGNOSES.txt lost+found PROVIDERS.txt
ENCOUNTERS.txt MEDICATION_ORDERS.txt VITALS.txt
EXTRACT_DATE.txt mysql
mfrigaard@MPROJECT:/mnt/data$ ls mysql
ls: cannot open directory 'mysql': Permission denied
mfrigaard@MPROJECT:/mnt/data$ cat proj_emrUCSF2018Aug.sql | grep "CREATE TABLE"
CREATE TABLE `ALLERGIES` (
CREATE TABLE `BILLING` (
CREATE TABLE `COVERAGE` (
CREATE TABLE `DEPARTMENTS` (
CREATE TABLE `DIAGNOSES` (
CREATE TABLE `ENCOUNTERS` (
CREATE TABLE `EXTRACT_DATE` (
CREATE TABLE `FLOWSHEETROWDIM` (
CREATE TABLE `FLOWSHEETVALUEFACT` (
CREATE TABLE `IMMUNIZATIONS` (
CREATE TABLE `LAB` (
CREATE TABLE `MEDICATION_ORDERS` (
CREATE TABLE `PATIENTS` (
CREATE TABLE `PATIENT_RACE` (
CREATE TABLE `PROCEDURE_ORDERS` (
...
I only see these two tables (then terminal stalls out...)