Easybuild below easybuild

README.md

installing

These are the steps:

#1. create and goto dir
mkdir path/to/apps/
cd path/to/apps/

wget https://gist.githubusercontent.com/mmterpstra/d11ec81bf78c169ab6be5911df384496/raw/easybuild_profile -O easybuild_profile
perl -i.bak -wpe 's/HPC_ENV_MYPREFIX/HPC_ENV_'$USER'/g' easybuild_profile 
. ./easybuild_profile &>/dev/null

# Install easybuild EasyBuild (https://docs.easybuild.io/en/latest/Installation.html)
# the $HPC_ENV_PREFIX is set to `path/to/apps/` or whatever you put the `easybuild_profile` in.

(ml EasyBuild && eb --install-latest-eb-release --prefix HPC_ENV_MYPREFIX)

#3. update your module references

. ./easybuild_profile

#4. install easybuild files

Run at login

Add this to your bash profile editing the ebbase="path/to/apps/"

ebbase="path/to/apps/"
if [ ${TERM} != 'dumb' ] ; then
	#private easybuild. "Keepin things easy"
	ebprofile=$ebbase"easybuild_profile"
	if [ -f $ebprofile ]; then
	        echo "## "$(date)" ##src ebprofile" &>/dev/stderr
	        . $ebprofile
	fi
else
        ebprofile=$ebbase"easybuild_profile"
        if [ -f $ebprofile ]; then
                . $ebprofile &>/dev/null
        fi
fi

easybuild_profile

#
##
### Check if we need to be sourced.
##
#

# Make sure we do not source this file for SFTP connections, << invalid you can source anything if it does not return any text without preceeding '#'
# which will terminate instantly when anything that is not a valid FTP command 
# is printed on STDOUT or STDERR. 
# For SFTP connections as well as SLURM jobs the TERM type is dumb, 
# but in the first case there are no SLURM related environment variables defined.


#if [ ${TERM} == 'dumb' ] && [[ ! "${BASH_EXECUTION_STRING}" =~ 'slurm' ]] && [ -z ${SLURM_JOBID} ] && [ -z ${HPC_ENV_SYNC_BY_CRON} ]; then
#    return
#fi

#LMOD=/usr/share/lmod/lmod/libexec/lmod
#upper works most of the time here is the lazyer config
LMOD="$(which lmod)"

if [ -e $LMOD ] ; then
	export PATH=$PATH":"$(dirname $LMOD)
else
	echo "lmod not found in $LMOD"
	exit 1
fi

#
##
### Update HPC environment.
##
#
#echo "BASH_SRC="${BASH_SOURCE[0]}" 0="$0
MY_DIR=$(cd -P $( dirname "${BASH_SOURCE[0]}" ) && pwd)
#echo $MY_DIR
export HPC_ENV_MYPREFIX=${MY_DIR}

#echo -n "Fetching available environment modules from ${HPC_ENV_PREFIX}/modules/... "
#
# EasyBuild env vars.
#

export EASYBUILD_MODULES_TOOL='Lmod'
export EASYBUILD_INSTALLPATH="${HPC_ENV_MYPREFIX}"
export EASYBUILD_BUILDPATH="${HPC_ENV_MYPREFIX}/.tmp/easybuild/builds/${USER}/"
export EASYBUILD_SOURCEPATH="${HPC_ENV_MYPREFIX}/sources/"
#export TEST_EASYBUILD_MODULES_TOOL='Lmod'

#
# Configure our module tool (Lmod).
#

export PATH="/usr/share/lmod/lmod/libexec/:${PATH}"
export LMOD_CACHE_DIR="${HPC_ENV_MYPREFIX}/modules/.lmod/cache/"
export LMOD_TIMESTAMP_FILE="${HPC_ENV_MYPREFIX}/modules/.lmod/modules_changed.timestamp"
export LMOD_RC="${HPC_ENV_MYPREFIX}/modules/.lmod/lmodrc.lua"
export LMOD_ADMIN_FILE="${HPC_ENV_MYPREFIX}/modules/modules.admin"
export LMOD_CASE_INDEPENDENT_SORTING='True'
export LMOD_REDIRECT='True'
export LMOD_PAGER='none'


mod_classes=""

for module_class in $(ls -1 ${HPC_ENV_MYPREFIX}/modules/ ); do

    if [ "${module_class}" != 'all' ] && \
       [ -d ${HPC_ENV_MYPREFIX}/modules/${module_class}/ ] && \
       [ -r ${HPC_ENV_MYPREFIX}/modules/${module_class}/ ]; then

        mod_classes="${mod_classes} ${HPC_ENV_MYPREFIX}/modules/${module_class}/"

    fi

done

module -q use ${mod_classes}

#echo 'done!'

lazy.sh

set -e -x -o pipefail

#cannnot get this to work on version 2.6!
python -c '#!/usr/bin/env python
import sys

if sys.version_info[0] != 2 or sys.version_info[1] < 7:
    print("This script requires Python version 2.7 or ml Python/2.7.11-foss-2015b")
    sys.exit(1)'


dir=$(dirname $(which $0 2> /dev/null) 2>/dev/null || readlink -f $(dirname $0))
#1. create and goto dir
#mkdir -p $dir
cd $dir

#just latest and the greatest
wget https://gist.githubusercontent.com/mmterpstra/d11ec81bf78c169ab6be5911df384496/easybuild_profile

#this might cause errors due to the fact that some subdirs aren't set up by easybuild that's why the error checking is turned on and off
set +e +x
. ./easybuild_profile
set -e -x -o pipefail

#2. download and install latest and greatest easybuild
# the $HPC_ENV_MYPREFIX is set to `path/to/apps/` or whatever dir you put the `easybuild_profile` in.

#export EASYBUILD_ENFORCE_CHECKSUMS=False

(ml EasyBuild && eb --install-latest-eb-release --prefix $HPC_ENV_MYPREFIX)

#export EASYBUILD_ENFORCE_CHECKSUMS=True


#3. update your module references
. ./easybuild_profile
ml --ignore-cache av
echo "## Done!!!!"
echo "#ps if you don't want to source it everytime you still need to add the piece of code in the readme to your ~/.bashrc."
#4. install easybuild files

lmod not found found it in /apps/software/lmod/lmod/libexec/lmod and EASYBUILD_ENFORCE_CHECKSUMS=True not checked

Updated now it should work on your usecase!

Thanks

Updated to work again due to bootstrap.py no longer being allowed. might need some testing though.