Transfer fastq files to butinah with rsync

gistfile1.sh

#!/bin/sh

# NOTICE: This assumes RSA key authentiction has been set up to rsync over ssh can proceed without prompting for a password.

#PBS -V
#PBS -l nodes=1:ppn=1,walltime=48:00:00
#PBS -M lg1883@nyu.edu
#PBS -m abe
#PBS -q s48
#PBS -l mem=1GB
#PBS -o /data/cgsb/gencore/log/kh1872_rsync.o
#PBS -e /data/cgsb/gencore/log/kh1872_rsync.e
#PBS -N kh1872_rsync

rsync --recursive --progress --partial --rsh=ssh /scratch/kh1872/rice/fastqs/fastqs_for_butinah butinah.abudhabi.nyu.edu:/scratch/gencore/