Makefile for compiling tex files (starting with 3 digits) in pdfs. Tune your pattern in the ALLPDF variable

tex.makefile

OUTDIR ?= `pwd`
DRAFTFLAGS = -draftmode --shell-escape -interaction nonstopmode -output-directory $(OUTDIR)
PDFFLAGS = --shell-escape -interaction nonstopmode -output-format pdf -output-directory $(OUTDIR)

ALLPDF = $(patsubst %.tex,%.pdf,$(shell find . -iregex \.\/[0-9]+_.*\.tex))

.PHONY: clean cleanpdf all

all: $(ALLPDF)

%.log %.aux: %.tex
        pdflatex $(DRAFTFLAGS) $<

%.bbl: %.aux
        bibtex $<

ifdef MAKEBIB
%.pdf: %.bbl
        pdflatex $(DRAFTFLAGS) $*.tex
else
%.pdf: %.log # Make a draft once
endif
        # Finally make the pdf
        pdflatex $(PDFFLAGS) $*.tex

clean:
        rm -rf *.aux *.log

cleanpdf:
        # Do not remove pdfs that are not produced by make
        rm -rf $(ALLPDF)