biorad.json5

// mind the casing: camelCase
// we use floats and integers not strings
// we use null where appropriate
// in regard to 4. "standardized analysis names": when we define a standard format, let's make sure to also standardize this
// similar for 5. "standardized instrument names": let the homogenization layer take care of this and make sure we define standard names for instrument types
{
  "name": "GE20_RT3168-3171-3173-3175_20200626_JRU_Prof",
  "instrument": "LightCycler480",
  "instrumentId": 6078,
  "instrumentName": "Prof_6078",
  "maxPositionsToSeek": 384,
  "maxAcquisition": 50,

  "analyses": [ // we only have the meta data for analyses only once & we leverage the the implicit ordering through lists later
    {
      "analysisName": "ICR",
      "analysisType": "Abs Quant/Fit Pts",
      "created": "2020-06-26T08:07:17.640",
      "colorCompensationSet": true,
      "colorCompensationFile": "RIDA_GENE_Color_Compensation_5-plex_384_20200327_JFA (CC)Prof",
      "emissionWl": 580,
      "excitationWl": 533,
      "fluorThresholdLevel": 0.842616182347137,
      "colorName": "VIC / HEX / Yellow555"
    },
    // ...next analysis...
  ],
  "positions": [
    {
      "positionName": "A1",
      "kitName": null, // depends on used chemicals of batch
      "sampleBarcode": "UKHC8LD9TK",
      "batchId": null,
      "acquisitions": [ // per analysis
        { "cp": 27.818181823423, "fluorescences": [4.38046411034769, 7.12341234123412, 2.9999999999999, ...] }, // these are the values for the first analysis, the first element is the value for the first position, the second for the second position, ...
        { "cp": null, "fluorescences": [...] } // this is the second analysis
        // ...
    }
  ]
}