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generate_cpp_index_attribute: schemas/index_attribute/CMakeFiles/generate_cpp_index_attribute
generate_cpp_index_attribute: schemas/index_attribute/entity/SdaiGeneral_datum_reference.cc
generate_cpp_index_attribute: schemas/index_attribute/entity/SdaiProduct_definition_shape.cc
generate_cpp_index_attribute: schemas/index_attribute/entity/SdaiDatum_reference_element.cc
generate_cpp_index_attribute: schemas/index_attribute/entity/SdaiDatum.cc
generate_cpp_index_attribute: schemas/index_attribute/entity/SdaiShape_aspect.cc
\ \ \ \ \ \ \ \ \ \ \ \ \ \ \ \ \ type/SdaiDatum_or_common_datum.cc
\ \ \ \ \ \ \ \ \ \ \ \ \ \ \ \ \ SdaiAll.cc
generate_cpp_index_attribute: schemas/index_attribute/compstructs.cc
generate_cpp_index_attribute: schemas/index_attribute/schema.cc
generate_cpp_index_attribute: schemas/index_attribute/SdaiINDEX_ATTRIBUTE.cc
generate_cpp_index_attribute: schemas/index_attribute/SdaiINDEX_ATTRIBUTE.init.cc
generate_cpp_index_attribute: schemas/index_attribute/CMakeFiles/generate_cpp_index_attribute.dir/build.make
.PHONY : generate_cpp_index_attribute

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CMakeLists.txt

# -----  GENERATED FILE  -----
# -----   Do not edit!   -----

# schema name: index_attribute
# (short name: index_attribute)
# contains 5 entities, 1 types

PROJECT( index_attribute)
# list headers so they can be installed - entity, type, misc
set( index_attribute_entity_hdrs
     entity/SdaiGeneral_datum_reference.h                                        entity/SdaiProduct_definition_shape.h                                       
     entity/SdaiDatum_reference_element.h                                        entity/SdaiDatum.h                                                          
     entity/SdaiShape_aspect.h                                                      )

set( index_attribute_type_hdrs
     type/SdaiDatum_or_common_datum.h                                               )

set( index_attribute_misc_hdrs
     Sdaiclasses.h   schema.h
     SdaiINDEX_ATTRIBUTEHelpers.h
     SdaiINDEX_ATTRIBUTENames.h
     SdaiINDEX_ATTRIBUTE.h
   )

# install all headers
install( FILES "${index_attribute_entity_hdrs} ${index_attribute_type_hdrs} ${index_attribute_misc_hdrs}"
         DESTINATION "include/schemas/index_attribute" )

# implementation files - 3 lists

set( index_attribute_entity_impls
     entity/SdaiGeneral_datum_reference.cc                                       entity/SdaiProduct_definition_shape.cc                                      
     entity/SdaiDatum_reference_element.cc                                       entity/SdaiDatum.cc                                                         
     entity/SdaiShape_aspect.cc                                                     )

set( index_attribute_type_impls
     type/SdaiDatum_or_common_datum.cc                                              )

set( index_attribute_misc_impls
     SdaiAll.cc    compstructs.cc    schema.cc
     SdaiINDEX_ATTRIBUTE.cc
     SdaiINDEX_ATTRIBUTE.init.cc   )

# targets, logic, etc are within a set of macros shared by all schemas
include( ${SC_CMAKE_DIR}/SC_CXX_schema_macros.cmake )
SCHEMA_TARGETS( "/home/mark/step/sc/build/../test/unitary_schemas/aggregate_index_attr.exp" "index_attribute"
                "${index_attribute_entity_impls}
                 ${index_attribute_type_impls}
                 ${index_attribute_misc_impls}" )

command-line.sh

# for some reason, github insists on reordering the files in this gist

# commands to recreate the described problem
git clone https://github.com/stepcode/stepcode.git sc
cd sc
git checkout mp/config-parse
mkdir build
cd build
cmake .. -DSC_BUILD_SCHEMAS=../test/unitary_schemas/aggregate_index_attr.exp 
make clean # other targets fail; this is fastest

#---------------------

# $ cmake --version
# cmake version 2.8.11.2

# cmake was built on 64-bit gentoo with
# http://sources.gentoo.org/cgi-bin/viewvc.cgi/gentoo-x86/dev-util/cmake/cmake-2.8.11.2.ebuild?view=markup

# the attached CMakeLists.txt is at build/schemas/index_attribute/CMakeLists.txt
# build.make is at build/schemas/index_attribute/CMakeFiles/generate_cpp_index_attribute.dir/build.make

output

mark@mark ~/step/sc/build $ cmake .. -DSC_BUILD_SCHEMAS=../test/unitary_schemas/aggregate_index_attr.exp 
-- The C compiler identification is GNU 4.7.3
-- The CXX compiler identification is GNU 4.7.3
-- Check for working C compiler: /usr/bin/cc
-- Check for working C compiler: /usr/bin/cc -- works
-- Detecting C compiler ABI info
-- Detecting C compiler ABI info - done
-- Check for working CXX compiler: /usr/bin/c++
-- Check for working CXX compiler: /usr/bin/c++ -- works
-- Detecting CXX compiler ABI info
-- Detecting CXX compiler ABI info - done
-- Could NOT find LEMON (missing:  LEMON_EXECUTABLE LEMON_TEMPLATE) 
-- Could NOT find RE2C (missing:  RE2C_EXECUTABLE) 
-- Could NOT find PERPLEX (missing:  PERPLEX_EXECUTABLE PERPLEX_TEMPLATE) 
-- Looking for ndir.h
-- Looking for ndir.h - not found
-- Looking for stdarg.h
-- Looking for stdarg.h - found
-- Looking for sys/stat.h
-- Looking for sys/stat.h - found
-- Looking for sys/param.h
-- Looking for sys/param.h - found
-- Looking for sysent.h
-- Looking for sysent.h - not found
-- Looking for unistd.h
-- Looking for unistd.h - found
-- Looking for dirent.h
-- Looking for dirent.h - found
-- Looking for stdbool.h
-- Looking for stdbool.h - found
-- Looking for process.h
-- Looking for process.h - not found
-- Looking for io.h
-- Looking for io.h - not found
-- Looking for abs
-- Looking for abs - found
-- Looking for memcpy
-- Looking for memcpy - found
-- Looking for memmove
-- Looking for memmove - found
-- Looking for getopt
-- Looking for getopt - found
-- Looking for sys/types.h
-- Looking for sys/types.h - found
-- Looking for stdint.h
-- Looking for stdint.h - found
-- Looking for stddef.h
-- Looking for stddef.h - found
-- Check size of ssize_t
-- Check size of ssize_t - done
-- Performing Test HAVE_STD_THREAD
-- Performing Test HAVE_STD_THREAD - Success
-- Will generate code for index_attribute.
.. Don't worry about any messages above about missing headers or failed tests, as long as
    you see 'Configuring done' below. Headers and features vary by compiler.
.. Generating step can take a while if you are building several schemas.
-- Configuring done
-- Generating done
-- Build files have been written to: /home/mark/step/sc/build

mark@mark ~/step/sc/build $ make clean
schemas/index_attribute/CMakeFiles/generate_cpp_index_attribute.dir/build.make:58: *** missing separator.  Stop.
make[1]: *** [schemas/index_attribute/CMakeFiles/generate_cpp_index_attribute.dir/clean] Error 2
make: *** [clean] Error 2